RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 A0A1B0GU69 56 aa2.44□□□□□ -2.02
LINC01048-201ENST00000414480 COX17Q14061 63 aa2.44□□□□□ -2.02
LINC01048-201ENST00000414480 ZCCHC13Q8WW36 166 aaKnown RBP2.44□□□□□ -2.02
LINC01048-201ENST00000414480 PRR34Q9NV39 138 aa2.44□□□□□ -2.02
LINC01048-201ENST00000414480 DNAH17Q9UFH2 4485 aa2.44□□□□□ -2.02
LINC01048-201ENST00000414480 HMCN2Q8NDA2 5059 aa2.44□□□□□ -2.02
LINC01048-201ENST00000414480 PKD1P98161 4303 aa2.43□□□□□ -2.02
LINC01048-201ENST00000414480 IGKV3OR2-268A0A0C4DH90 116 aa2.43□□□□□ -2.02
LINC01048-201ENST00000414480 KRTAP10-5P60370 271 aa2.43□□□□□ -2.02
LINC01048-201ENST00000414480 DEFB114Q30KQ6 69 aa2.43□□□□□ -2.02
LINC01048-201ENST00000414480 C9orf129Q5T035 196 aaKnown RBP2.43□□□□□ -2.02
LINC01048-201ENST00000414480 SPATA8Q6RVD6 105 aa2.43□□□□□ -2.02
LINC01048-201ENST00000414480 LINC00308Q8TCZ7 52 aa2.43□□□□□ -2.02
LINC01048-201ENST00000414480 LITAFQ99732 161 aa2.43□□□□□ -2.02
LINC01048-201ENST00000414480 PLAC8Q9NZF1 115 aa2.43□□□□□ -2.02
LINC01048-201ENST00000414480 LRP1BQ9NZR2 4599 aa2.43□□□□□ -2.02
LINC01048-201ENST00000414480 MYCBP2O75592 4640 aa2.43□□□□□ -2.02
LINC01048-201ENST00000414480 DNAH6Q9C0G6 4158 aa2.42□□□□□ -2.02
LINC01048-201ENST00000414480 GAS8-AS1O95177 125 aa2.42□□□□□ -2.02
LINC01048-201ENST00000414480 COX7BP24311 80 aa2.42□□□□□ -2.02
LINC01048-201ENST00000414480 TMEM167AQ8TBQ9 72 aa2.42□□□□□ -2.02
LINC01048-201ENST00000414480 TNCP24821 2201 aa2.42□□□□□ -2.02
LINC01048-201ENST00000414480 A0A1B0GU33 70 aa2.41□□□□□ -2.02
LINC01048-201ENST00000414480 H3BRN7 92 aa2.41□□□□□ -2.02
LINC01048-201ENST00000414480 IGKV4-1P06312 121 aa2.41□□□□□ -2.02
LINC01048-201ENST00000414480 KRTAP26-1Q6PEX3 210 aa2.41□□□□□ -2.02
LINC01048-201ENST00000414480 Q6ZQY7 126 aa2.41□□□□□ -2.02
LINC01048-201ENST00000414480 FLG2Q5D862 2391 aaPredicted RBP2.41□□□□□ -2.02
LINC01048-201ENST00000414480 IGLV4-60A0A075B6I1 120 aa2.4□□□□□ -2.03
LINC01048-201ENST00000414480 TRGV1A0A0A0MS02 117 aa2.4□□□□□ -2.03
LINC01048-201ENST00000414480 IGKV2-29A2NJV5 120 aaPredicted RBP2.4□□□□□ -2.03
LINC01048-201ENST00000414480 NDUFA1O15239 70 aa2.4□□□□□ -2.03
LINC01048-201ENST00000414480 RPL39P5Q59GN2 51 aa2.4□□□□□ -2.03
LINC01048-201ENST00000414480 Q5W150 140 aa2.4□□□□□ -2.03
LINC01048-201ENST00000414480 Q6ZTI0 123 aa2.4□□□□□ -2.03
LINC01048-201ENST00000414480 TYMSOSQ8TAI1 123 aa2.4□□□□□ -2.03
LINC01048-201ENST00000414480 SPRR4Q96PI1 79 aa2.4□□□□□ -2.03
LINC01048-201ENST00000414480 KAAG1Q9UBP8 84 aa2.4□□□□□ -2.03
LINC01048-201ENST00000414480 ZNF861PO60384 105 aa2.39□□□□□ -2.03
LINC01048-201ENST00000414480 GIG44P09565 113 aaPredicted RBP2.39□□□□□ -2.03
LINC01048-201ENST00000414480 ACYP2P14621 99 aa2.39□□□□□ -2.03
LINC01048-201ENST00000414480 POLR2KP53803 58 aaKnown RBP2.39□□□□□ -2.03
LINC01048-201ENST00000414480 RPL37AP61513 92 aaKnown RBP2.39□□□□□ -2.03
LINC01048-201ENST00000414480 WT1-ASQ06250 92 aa2.39□□□□□ -2.03
LINC01048-201ENST00000414480 C9orf163Q8N9P6 203 aa2.39□□□□□ -2.03
LINC01048-201ENST00000414480 SMIM11BQ8TCY0 68 aa2.39□□□□□ -2.03
LINC01048-201ENST00000414480 SRRM2Q9UQ35 2752 aaKnown RBP2.39□□□□□ -2.03
LINC01048-201ENST00000414480 DNAH5Q8TE73 4624 aa2.38□□□□□ -2.03
LINC01048-201ENST00000414480 RNF213Q63HN8 5207 aa2.38□□□□□ -2.03
LINC01048-201ENST00000414480 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.38□□□□□ -2.03
LINC01048-201ENST00000414480 IGKV2-40A0A087WW87 121 aaPredicted RBP2.38□□□□□ -2.03
LINC01048-201ENST00000414480 IGKV2D-40P01614 121 aaPredicted RBP2.38□□□□□ -2.03
LINC01048-201ENST00000414480 LINC00158P58513 81 aa2.38□□□□□ -2.03
LINC01048-201ENST00000414480 DEFB136Q30KP8 78 aa2.38□□□□□ -2.03
LINC01048-201ENST00000414480 KCNQ1DNQ9H478 68 aa2.38□□□□□ -2.03
LINC01048-201ENST00000414480 FAT1Q14517 4588 aa2.37□□□□□ -2.03
LINC01048-201ENST00000414480 LINC00959A0A1B0GUT2 108 aa2.37□□□□□ -2.03
LINC01048-201ENST00000414480 TRBV6-4A0A1B0GX49 114 aa2.37□□□□□ -2.03
LINC01048-201ENST00000414480 MRGPRG-AS1Q2M3A8 158 aa2.37□□□□□ -2.03
LINC01048-201ENST00000414480 ST20-AS1Q8NBB2 130 aa2.37□□□□□ -2.03
LINC01048-201ENST00000414480 I3L2K1 104 aa2.36□□□□□ -2.03
LINC01048-201ENST00000414480 FAM168BA1KXE4 195 aa2.35□□□□□ -2.03
LINC01048-201ENST00000414480 KRTAP9-6A8MVA2 160 aa2.35□□□□□ -2.03
LINC01048-201ENST00000414480 LINC00315P59091 139 aa2.35□□□□□ -2.03
LINC01048-201ENST00000414480 SSBP3-AS1Q7Z2R9 100 aa2.35□□□□□ -2.03
LINC01048-201ENST00000414480 Q8N9L7 120 aa2.34□□□□□ -2.03
LINC01048-201ENST00000414480 RPL39LQ96EH5 51 aaKnown RBP2.34□□□□□ -2.03
LINC01048-201ENST00000414480 A0A0J9YWU9 116 aa2.33□□□□□ -2.04
LINC01048-201ENST00000414480 K7EIM0 57 aa2.33□□□□□ -2.04
LINC01048-201ENST00000414480 RPL39P62891 51 aaKnown RBP2.33□□□□□ -2.04
LINC01048-201ENST00000414480 C10orf55Q5SWW7 151 aa2.33□□□□□ -2.04
LINC01048-201ENST00000414480 LINC00304Q8N9R0 145 aa2.33□□□□□ -2.04
LINC01048-201ENST00000414480 A0A087WTM6 91 aa2.32□□□□□ -2.04
LINC01048-201ENST00000414480 KLK9Q2XQG4 91 aa2.32□□□□□ -2.04
LINC01048-201ENST00000414480 C5orf56Q8N8D9 126 aa2.32□□□□□ -2.04
LINC01048-201ENST00000414480 LEAP2Q969E1 77 aa2.32□□□□□ -2.04
LINC01048-201ENST00000414480 Q96NJ1 140 aa2.32□□□□□ -2.04
LINC01048-201ENST00000414480 APLNQ9ULZ1 77 aa2.32□□□□□ -2.04
LINC01048-201ENST00000414480 R4GN34 69 aa2.32□□□□□ -2.04
LINC01048-201ENST00000414480 VPS13BQ7Z7G8 4022 aa2.32□□□□□ -2.04
LINC01048-201ENST00000414480 NBDYA0A0U1RRE5 68 aa2.31□□□□□ -2.04
LINC01048-201ENST00000414480 MINOS1Q5TGZ0 78 aa2.31□□□□□ -2.04
LINC01048-201ENST00000414480 LINC00472Q9H8W2 130 aa2.31□□□□□ -2.04
LINC01048-201ENST00000414480 LRP2P98164 4655 aa2.31□□□□□ -2.04
LINC01048-201ENST00000414480 DEFB131BA0A096LNP1 70 aa2.3□□□□□ -2.04
LINC01048-201ENST00000414480 A0A1B0GUV1 79 aa2.3□□□□□ -2.04
LINC01048-201ENST00000414480 A0A1W2PNN7 141 aa2.3□□□□□ -2.04
LINC01048-201ENST00000414480 M0QY20 66 aa2.3□□□□□ -2.04
LINC01048-201ENST00000414480 Q5VSD8 79 aa2.3□□□□□ -2.04
LINC01048-201ENST00000414480 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.3□□□□□ -2.04
LINC01048-201ENST00000414480 CDKN2A-AS1Q9UH64 79 aa2.3□□□□□ -2.04
LINC01048-201ENST00000414480 MUC2Q02817 5179 aa2.3□□□□□ -2.04
LINC01048-201ENST00000414480 A0A0G2JQZ4 141 aa2.29□□□□□ -2.04
LINC01048-201ENST00000414480 M0R2N4 97 aa2.29□□□□□ -2.04
LINC01048-201ENST00000414480 LINC00575Q6W349 94 aa2.29□□□□□ -2.04
LINC01048-201ENST00000414480 Q8IZM0 81 aa2.29□□□□□ -2.04
LINC01048-201ENST00000414480 PRO2289Q9P1D8 64 aa2.29□□□□□ -2.04
LINC01048-201ENST00000414480 PSORS1C2Q9UIG4 136 aa2.29□□□□□ -2.04
LINC01048-201ENST00000414480 LRP1Q07954 4544 aaKnown RBP2.29□□□□□ -2.04
LINC01048-201ENST00000414480 FAT4Q6V0I7 4981 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms