RNA–Protein interactions for RNA: ENST00000408378.1

MIR548I3-201, Transcript of microRNA 548i-3, humanhuman

BASIC

Gene MIR548I3, Length 149 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548I3-201ENST00000408378 NDUFB1O75438 58 aa-2.26□□□□□ -2.77
MIR548I3-201ENST00000408378 PARP4Q9UKK3 1724 aaKnown RBP-2.26□□□□□ -2.77
MIR548I3-201ENST00000408378 CLTCQ00610 1675 aaKnown RBP-2.27□□□□□ -2.77
MIR548I3-201ENST00000408378 S100A12P80511 92 aa-2.27□□□□□ -2.77
MIR548I3-201ENST00000408378 EPRSP07814 1512 aaKnown RBP-2.27□□□□□ -2.77
MIR548I3-201ENST00000408378 DEFB4AO15263 64 aa-2.28□□□□□ -2.77
MIR548I3-201ENST00000408378 HMGN1P05114 100 aa-2.28□□□□□ -2.77
MIR548I3-201ENST00000408378 IFI27P40305 119 aaPredicted RBP-2.28□□□□□ -2.77
MIR548I3-201ENST00000408378 SMIM11AP58511 58 aa-2.28□□□□□ -2.77
MIR548I3-201ENST00000408378 SARNPP82979 210 aaKnown RBP-2.29□□□□□ -2.78
MIR548I3-201ENST00000408378 NEXMIFQ5QGS0 1516 aa-2.29□□□□□ -2.78
MIR548I3-201ENST00000408378 LY75O60449 1722 aa-2.3□□□□□ -2.78
MIR548I3-201ENST00000408378 DDX60LQ5H9U9 1706 aaKnown RBP-2.3□□□□□ -2.78
MIR548I3-201ENST00000408378 EIF4G3O43432 1585 aaKnown RBP-2.3□□□□□ -2.78
MIR548I3-201ENST00000408378 DEFB131BA0A096LNP1 70 aa-2.3□□□□□ -2.78
MIR548I3-201ENST00000408378 LINC00032P0C843 101 aa-2.3□□□□□ -2.78
MIR548I3-201ENST00000408378 DIP2BQ9P265 1576 aa-2.31□□□□□ -2.78
MIR548I3-201ENST00000408378 MAST1Q9Y2H9 1570 aa-2.31□□□□□ -2.78
MIR548I3-201ENST00000408378 FANCAO15360 1455 aa-2.31□□□□□ -2.78
MIR548I3-201ENST00000408378 NCOA2Q15596 1464 aa-2.31□□□□□ -2.78
MIR548I3-201ENST00000408378 NDUFA4O00483 81 aa-2.31□□□□□ -2.78
MIR548I3-201ENST00000408378 RPS27P42677 84 aaKnown RBP-2.31□□□□□ -2.78
MIR548I3-201ENST00000408378 PEA15Q15121 130 aa-2.31□□□□□ -2.78
MIR548I3-201ENST00000408378 BVES-AS1Q5T3Y7 98 aa-2.31□□□□□ -2.78
MIR548I3-201ENST00000408378 RPS27LQ71UM5 84 aaKnown RBP-2.31□□□□□ -2.78
MIR548I3-201ENST00000408378 NOP10Q9NPE3 64 aaKnown RBP-2.31□□□□□ -2.78
MIR548I3-201ENST00000408378 ATP10BO94823 1461 aa-2.32□□□□□ -2.78
MIR548I3-201ENST00000408378 CCNB3Q8WWL7 1395 aa-2.32□□□□□ -2.78
MIR548I3-201ENST00000408378 C20orf202A1L168 122 aa-2.32□□□□□ -2.78
MIR548I3-201ENST00000408378 LINC01546A6NGU7 62 aa-2.32□□□□□ -2.78
MIR548I3-201ENST00000408378 UMAD1C9J7I0 102 aa-2.32□□□□□ -2.78
MIR548I3-201ENST00000408378 ITSN2Q9NZM3 1697 aa-2.32□□□□□ -2.78
MIR548I3-201ENST00000408378 ZFYVE16Q7Z3T8 1539 aa-2.32□□□□□ -2.78
MIR548I3-201ENST00000408378 CFAP47Q6ZTR5 3102 aa-2.33□□□□□ -2.78
MIR548I3-201ENST00000408378 MYMXA0A1B0GTQ4 84 aa-2.33□□□□□ -2.78
MIR548I3-201ENST00000408378 RPS29P62273 56 aaKnown RBP-2.33□□□□□ -2.78
MIR548I3-201ENST00000408378 H3BUA1 57 aa-2.34□□□□□ -2.78
MIR548I3-201ENST00000408378 S100A10P60903 97 aa-2.34□□□□□ -2.78
MIR548I3-201ENST00000408378 C2orf88Q9BSF0 95 aa-2.34□□□□□ -2.78
MIR548I3-201ENST00000408378 DPY30Q9C005 99 aa-2.34□□□□□ -2.78
MIR548I3-201ENST00000408378 KIAA0586Q9BVV6 1533 aa-2.35□□□□□ -2.79
MIR548I3-201ENST00000408378 EFCAB10A6NFE3 127 aa-2.35□□□□□ -2.79
MIR548I3-201ENST00000408378 S100PP25815 95 aa-2.35□□□□□ -2.79
MIR548I3-201ENST00000408378 CRIP1P50238 77 aa-2.35□□□□□ -2.79
MIR548I3-201ENST00000408378 ACBD7Q8N6N7 88 aa-2.35□□□□□ -2.79
MIR548I3-201ENST00000408378 ITSN1Q15811 1721 aa-2.35□□□□□ -2.79
MIR548I3-201ENST00000408378 ARFGEF2Q9Y6D5 1785 aa-2.36□□□□□ -2.79
MIR548I3-201ENST00000408378 KIF1AQ12756 1690 aa-2.36□□□□□ -2.79
MIR548I3-201ENST00000408378 ZC3H13Q5T200 1668 aaKnown RBP-2.36□□□□□ -2.79
MIR548I3-201ENST00000408378 M0QZ58 72 aa-2.36□□□□□ -2.79
MIR548I3-201ENST00000408378 MRPL33O75394 65 aaKnown RBP-2.36□□□□□ -2.79
MIR548I3-201ENST00000408378 CEBPZOSA8MTT3 80 aa-2.37□□□□□ -2.79
MIR548I3-201ENST00000408378 CCDC88BA6NC98 1476 aa-2.38□□□□□ -2.79
MIR548I3-201ENST00000408378 MINOS1Q5TGZ0 78 aa-2.38□□□□□ -2.79
MIR548I3-201ENST00000408378 THOC2Q8NI27 1593 aaKnown RBP-2.38□□□□□ -2.79
MIR548I3-201ENST00000408378 C20orf78Q9BR46 151 aa-2.38□□□□□ -2.79
MIR548I3-201ENST00000408378 RABAC1Q9UI14 185 aa-2.38□□□□□ -2.79
MIR548I3-201ENST00000408378 USP34Q70CQ2 3546 aa-2.38□□□□□ -2.79
MIR548I3-201ENST00000408378 UBR1Q8IWV7 1749 aa-2.39□□□□□ -2.79
MIR548I3-201ENST00000408378 LOC400499M0QZD8 3231 aa-2.39□□□□□ -2.79
MIR548I3-201ENST00000408378 URB2Q14146 1524 aaKnown RBP-2.39□□□□□ -2.79
MIR548I3-201ENST00000408378 SPART-AS1P0CW21 52 aa-2.4□□□□□ -2.79
MIR548I3-201ENST00000408378 PLCH1Q4KWH8 1693 aa-2.41□□□□□ -2.79
MIR548I3-201ENST00000408378 LINC00587B1AMM8 73 aa-2.41□□□□□ -2.8
MIR548I3-201ENST00000408378 GYPAP02724 150 aa-2.41□□□□□ -2.8
MIR548I3-201ENST00000408378 HMGA1P17096 107 aaKnown RBP-2.41□□□□□ -2.8
MIR548I3-201ENST00000408378 SMARCA2P51531 1590 aa-2.41□□□□□ -2.8
MIR548I3-201ENST00000408378 MYO3AQ8NEV4 1616 aa-2.42□□□□□ -2.8
MIR548I3-201ENST00000408378 TJP1Q07157 1748 aa-2.42□□□□□ -2.8
MIR548I3-201ENST00000408378 VCANP13611 3396 aa-2.42□□□□□ -2.8
MIR548I3-201ENST00000408378 M0QY20 66 aa-2.42□□□□□ -2.8
MIR548I3-201ENST00000408378 NREPQ16612 68 aa-2.42□□□□□ -2.8
MIR548I3-201ENST00000408378 TMEM131LA2VDJ0 1609 aa-2.42□□□□□ -2.8
MIR548I3-201ENST00000408378 LINC00643Q86TS7 51 aa-2.43□□□□□ -2.8
MIR548I3-201ENST00000408378 KCNQ1DNQ9H478 68 aa-2.43□□□□□ -2.8
MIR548I3-201ENST00000408378 UNC13AQ9UPW8 1703 aa-2.43□□□□□ -2.8
MIR548I3-201ENST00000408378 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-2.43□□□□□ -2.8
MIR548I3-201ENST00000408378 LRRIQ1Q96JM4 1722 aa-2.44□□□□□ -2.8
MIR548I3-201ENST00000408378 SFTA3P0C7M3 94 aa-2.44□□□□□ -2.8
MIR548I3-201ENST00000408378 SNRPFP62306 86 aaKnown RBP-2.44□□□□□ -2.8
MIR548I3-201ENST00000408378 C6orf48Q9UBA6 75 aa-2.44□□□□□ -2.8
MIR548I3-201ENST00000408378 A8MTW9 85 aa-2.45□□□□□ -2.8
MIR548I3-201ENST00000408378 RBP2P50120 134 aa-2.45□□□□□ -2.8
MIR548I3-201ENST00000408378 NCBP2-AS2Q69YL0 99 aa-2.45□□□□□ -2.8
MIR548I3-201ENST00000408378 A0A1B0GUL6 1792 aa-2.46□□□□□ -2.8
MIR548I3-201ENST00000408378 FCER1GP30273 86 aa-2.46□□□□□ -2.8
MIR548I3-201ENST00000408378 UBL5Q9BZL1 73 aa-2.47□□□□□ -2.8
MIR548I3-201ENST00000408378 UNC80Q8N2C7 3258 aa-2.48□□□□□ -2.81
MIR548I3-201ENST00000408378 NRAPQ86VF7 1730 aa-2.48□□□□□ -2.81
MIR548I3-201ENST00000408378 CEP162Q5TB80 1403 aa-2.48□□□□□ -2.81
MIR548I3-201ENST00000408378 C14orf144Q96I85 54 aa-2.48□□□□□ -2.81
MIR548I3-201ENST00000408378 ARHGAP35Q9NRY4 1499 aa-2.48□□□□□ -2.81
MIR548I3-201ENST00000408378 DEFB136Q30KP8 78 aa-2.49□□□□□ -2.81
MIR548I3-201ENST00000408378 PIK3C2BO00750 1634 aa-2.5□□□□□ -2.81
MIR548I3-201ENST00000408378 RNF17Q9BXT8 1623 aaKnown RBP-2.5□□□□□ -2.81
MIR548I3-201ENST00000408378 RICTORQ6R327 1708 aa-2.5□□□□□ -2.81
MIR548I3-201ENST00000408378 NCMAPQ5T1S8 102 aa-2.5□□□□□ -2.81
MIR548I3-201ENST00000408378 INO80Q9ULG1 1556 aaPredicted RBP-2.5□□□□□ -2.81
MIR548I3-201ENST00000408378 CD163L1Q9NR16 1453 aa-2.51□□□□□ -2.81
MIR548I3-201ENST00000408378 PYY3Q5JQD4 70 aa-2.51□□□□□ -2.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms