RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 KRTAP13-1Q8IUC0 172 aa9.72□□□□□ -0.85
COL4A3BP-204ENST00000405807 C8orf17Q9NRJ1 99 aa9.72□□□□□ -0.85
COL4A3BP-204ENST00000405807 DNAH10Q8IVF4 4471 aa9.71□□□□□ -0.86
COL4A3BP-204ENST00000405807 UQCR11O14957 56 aa9.71□□□□□ -0.86
COL4A3BP-204ENST00000405807 IGLV9-49A0A0B4J1Y8 123 aa9.69□□□□□ -0.86
COL4A3BP-204ENST00000405807 K7EIL1 84 aa9.67□□□□□ -0.86
COL4A3BP-204ENST00000405807 HUWE1Q7Z6Z7 4374 aaKnown RBP9.66□□□□□ -0.86
COL4A3BP-204ENST00000405807 A0A1B0GVX0 72 aa9.65□□□□□ -0.86
COL4A3BP-204ENST00000405807 CDK2AP2O75956 126 aa9.65□□□□□ -0.86
COL4A3BP-204ENST00000405807 TENM2Q9NT68 2774 aa9.64□□□□□ -0.87
COL4A3BP-204ENST00000405807 NOTCH2NLQ7Z3S9 236 aa9.64□□□□□ -0.87
COL4A3BP-204ENST00000405807 MGAM2Q2M2H8 2515 aa9.63□□□□□ -0.87
COL4A3BP-204ENST00000405807 PANO1I0J062 215 aa9.62□□□□□ -0.87
COL4A3BP-204ENST00000405807 LINC00483Q53H64 154 aa9.62□□□□□ -0.87
COL4A3BP-204ENST00000405807 MRPL34Q9BQ48 92 aaKnown RBP9.62□□□□□ -0.87
COL4A3BP-204ENST00000405807 APLNQ9ULZ1 77 aa9.62□□□□□ -0.87
COL4A3BP-204ENST00000405807 LYSTQ99698 3801 aa9.6□□□□□ -0.87
COL4A3BP-204ENST00000405807 KRTAP16-1A8MUX0 517 aa9.6□□□□□ -0.87
COL4A3BP-204ENST00000405807 DNAH9Q9NYC9 4486 aa9.59□□□□□ -0.87
COL4A3BP-204ENST00000405807 A8MUU9 505 aa9.57□□□□□ -0.88
COL4A3BP-204ENST00000405807 IGLV5-52A0A0A0MRZ9 124 aa9.57□□□□□ -0.88
COL4A3BP-204ENST00000405807 ACYP2P14621 99 aa9.55□□□□□ -0.88
COL4A3BP-204ENST00000405807 SPACA4Q8TDM5 124 aa9.55□□□□□ -0.88
COL4A3BP-204ENST00000405807 WWC2-AS2Q96NR7 200 aa9.55□□□□□ -0.88
COL4A3BP-204ENST00000405807 NBDYA0A0U1RRE5 68 aa9.54□□□□□ -0.88
COL4A3BP-204ENST00000405807 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.54□□□□□ -0.88
COL4A3BP-204ENST00000405807 Q6ZRN7 208 aaPredicted RBP9.5□□□□□ -0.89
COL4A3BP-204ENST00000405807 NDUFAF8A1L188 74 aa9.49□□□□□ -0.89
COL4A3BP-204ENST00000405807 COL7A1Q02388 2944 aa9.47□□□□□ -0.89
COL4A3BP-204ENST00000405807 PSORS1C2Q9UIG4 136 aa9.47□□□□□ -0.89
COL4A3BP-204ENST00000405807 ANAPC11Q9NYG5 84 aa9.46□□□□□ -0.89
COL4A3BP-204ENST00000405807 STAB2Q8WWQ8 2551 aa9.46□□□□□ -0.89
COL4A3BP-204ENST00000405807 Q5W150 140 aa9.45□□□□□ -0.9
COL4A3BP-204ENST00000405807 DMAC1Q96GE9 116 aa9.45□□□□□ -0.9
COL4A3BP-204ENST00000405807 C20orf166-AS1Q96NR2 134 aa9.44□□□□□ -0.9
COL4A3BP-204ENST00000405807 ALMS1Q8TCU4 4167 aa9.44□□□□□ -0.9
COL4A3BP-204ENST00000405807 KRTAP13-3Q3SY46 172 aa9.43□□□□□ -0.9
COL4A3BP-204ENST00000405807 SPINK6Q6UWN8 80 aa9.43□□□□□ -0.9
COL4A3BP-204ENST00000405807 DYNC2H1Q8NCM8 4307 aaKnown RBP9.4□□□□□ -0.9
COL4A3BP-204ENST00000405807 DNAH7Q8WXX0 4024 aa9.39□□□□□ -0.91
COL4A3BP-204ENST00000405807 A0A087WTM6 91 aa9.39□□□□□ -0.91
COL4A3BP-204ENST00000405807 LINC00304Q8N9R0 145 aa9.38□□□□□ -0.91
COL4A3BP-204ENST00000405807 NUPR2A6NF83 97 aa9.37□□□□□ -0.91
COL4A3BP-204ENST00000405807 CRIPTQ9P021 101 aa9.37□□□□□ -0.91
COL4A3BP-204ENST00000405807 IGLV7-43P04211 117 aa9.36□□□□□ -0.91
COL4A3BP-204ENST00000405807 FLG2Q5D862 2391 aaPredicted RBP9.35□□□□□ -0.91
COL4A3BP-204ENST00000405807 CIRBP-AS1Q8TBR5 109 aa9.34□□□□□ -0.91
COL4A3BP-204ENST00000405807 PLECQ15149 4684 aaKnown RBP9.32□□□□□ -0.92
COL4A3BP-204ENST00000405807 SPINT4Q6UDR6 99 aa9.32□□□□□ -0.92
COL4A3BP-204ENST00000405807 FAM229AH3BQW9 127 aa9.29□□□□□ -0.92
COL4A3BP-204ENST00000405807 SSBP3-AS1Q7Z2R9 100 aa9.29□□□□□ -0.92
COL4A3BP-204ENST00000405807 DNAH8Q96JB1 4490 aa9.29□□□□□ -0.92
COL4A3BP-204ENST00000405807 FRAS1Q86XX4 4008 aa9.26□□□□□ -0.93
COL4A3BP-204ENST00000405807 HECTD4Q9Y4D8 3996 aa9.25□□□□□ -0.93
COL4A3BP-204ENST00000405807 IGKV2-30P06310 120 aa9.23□□□□□ -0.93
COL4A3BP-204ENST00000405807 LUZP6Q538Z0 58 aa9.22□□□□□ -0.93
COL4A3BP-204ENST00000405807 VPS13DQ5THJ4 4388 aa9.18□□□□□ -0.94
COL4A3BP-204ENST00000405807 KRTAP15-1Q3LI76 137 aa9.15□□□□□ -0.94
COL4A3BP-204ENST00000405807 H0YAA0 97 aa9.13□□□□□ -0.95
COL4A3BP-204ENST00000405807 DNAH17Q9UFH2 4485 aa9.13□□□□□ -0.95
COL4A3BP-204ENST00000405807 STARD9Q9P2P6 4700 aa9.1□□□□□ -0.95
COL4A3BP-204ENST00000405807 IGKV2D-30A0A075B6S6 120 aa9.08□□□□□ -0.96
COL4A3BP-204ENST00000405807 TGP01266 2768 aa9.07□□□□□ -0.96
COL4A3BP-204ENST00000405807 KRTAP13-2Q52LG2 175 aa9.07□□□□□ -0.96
COL4A3BP-204ENST00000405807 Q6ZSA8 131 aa9.06□□□□□ -0.96
COL4A3BP-204ENST00000405807 K7ERS5 55 aa9.05□□□□□ -0.96
COL4A3BP-204ENST00000405807 DNAH2Q9P225 4427 aa9.05□□□□□ -0.96
COL4A3BP-204ENST00000405807 LY6G6CO95867 125 aa9.05□□□□□ -0.96
COL4A3BP-204ENST00000405807 PRKDCP78527 4128 aaKnown RBP9.03□□□□□ -0.96
COL4A3BP-204ENST00000405807 KMT2AQ03164 3969 aa9.03□□□□□ -0.96
COL4A3BP-204ENST00000405807 SEC61BP60468 96 aaKnown RBP8.99□□□□□ -0.97
COL4A3BP-204ENST00000405807 MEGF8Q7Z7M0 2845 aa8.99□□□□□ -0.97
COL4A3BP-204ENST00000405807 FBN3Q75N90 2809 aa8.98□□□□□ -0.97
COL4A3BP-204ENST00000405807 SPINK1P00995 79 aa8.95□□□□□ -0.98
COL4A3BP-204ENST00000405807 DNAH11Q96DT5 4516 aa8.94□□□□□ -0.98
COL4A3BP-204ENST00000405807 KRTAP10-2P60368 255 aa8.93□□□□□ -0.98
COL4A3BP-204ENST00000405807 TPRXLQ17RH7 258 aa8.92□□□□□ -0.98
COL4A3BP-204ENST00000405807 KRTAP1-4P0C5Y4 121 aa8.9□□□□□ -0.98
COL4A3BP-204ENST00000405807 DNAH6Q9C0G6 4158 aa8.88□□□□□ -0.99
COL4A3BP-204ENST00000405807 A0A1B0GU33 70 aa8.88□□□□□ -0.99
COL4A3BP-204ENST00000405807 Q8N1X5 172 aa8.87□□□□□ -0.99
COL4A3BP-204ENST00000405807 DNAH5Q8TE73 4624 aa8.85□□□□□ -0.99
COL4A3BP-204ENST00000405807 TYMSOSQ8TAI1 123 aa8.85□□□□□ -0.99
COL4A3BP-204ENST00000405807 KRTAP10-1P60331 282 aa8.83□□□□□ -1
COL4A3BP-204ENST00000405807 DNHD1Q96M86 4753 aa8.8□□□□□ -1
COL4A3BP-204ENST00000405807 LRP1BQ9NZR2 4599 aa8.78□□□□□ -1
COL4A3BP-204ENST00000405807 C10orf95Q9H7T3 257 aa8.77□□□□□ -1
COL4A3BP-204ENST00000405807 H1FX-AS1Q4G0G2 97 aa8.77□□□□□ -1.01
COL4A3BP-204ENST00000405807 RPS29P62273 56 aaKnown RBP8.72□□□□□ -1.01
COL4A3BP-204ENST00000405807 VPS13BQ7Z7G8 4022 aa8.69□□□□□ -1.02
COL4A3BP-204ENST00000405807 PKD1P98161 4303 aa8.65□□□□□ -1.02
COL4A3BP-204ENST00000405807 KRTAP3-1Q9BYR8 98 aa8.62□□□□□ -1.03
COL4A3BP-204ENST00000405807 C9orf92A6NGG3 77 aa8.6□□□□□ -1.03
COL4A3BP-204ENST00000405807 KRTAP21-3Q3LHN1 58 aa8.58□□□□□ -1.04
COL4A3BP-204ENST00000405807 FAT2Q9NYQ8 4349 aa8.56□□□□□ -1.04
COL4A3BP-204ENST00000405807 RPL37P61927 97 aaKnown RBP8.53□□□□□ -1.04
COL4A3BP-204ENST00000405807 COX6B2Q6YFQ2 88 aa8.53□□□□□ -1.04
COL4A3BP-204ENST00000405807 HYDINQ4G0P3 5121 aa8.49□□□□□ -1.05
COL4A3BP-204ENST00000405807 DMBT1Q9UGM3 2413 aaPredicted RBP8.49□□□□□ -1.05
COL4A3BP-204ENST00000405807 SACSQ9NZJ4 4579 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms