RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 IGLV7-46A0A075B6I9 117 aa6.03□□□□□ -1.44
PTCHD4-202ENST00000398738 SPINK6Q6UWN8 80 aa6.03□□□□□ -1.44
PTCHD4-202ENST00000398738 ATP11AUNQ6ZP68 121 aa6.03□□□□□ -1.44
PTCHD4-202ENST00000398738 KRTAP4-8Q9BYQ9 185 aa6.03□□□□□ -1.44
PTCHD4-202ENST00000398738 K7EIL1 84 aa6.03□□□□□ -1.44
PTCHD4-202ENST00000398738 Q75L30 129 aa6.03□□□□□ -1.44
PTCHD4-202ENST00000398738 PRR26Q8N8Z3 221 aa6.02□□□□□ -1.45
PTCHD4-202ENST00000398738 DNHD1Q96M86 4753 aa6.02□□□□□ -1.45
PTCHD4-202ENST00000398738 PANO1I0J062 215 aa6.01□□□□□ -1.45
PTCHD4-202ENST00000398738 CDK2AP2O75956 126 aa6.01□□□□□ -1.45
PTCHD4-202ENST00000398738 KRTAP15-1Q3LI76 137 aa6.01□□□□□ -1.45
PTCHD4-202ENST00000398738 A0A087X002 238 aa6□□□□□ -1.45
PTCHD4-202ENST00000398738 NOTCH2NLQ7Z3S9 236 aa6□□□□□ -1.45
PTCHD4-202ENST00000398738 MOBPQ13875 183 aa5.99□□□□□ -1.45
PTCHD4-202ENST00000398738 C8orf17Q9NRJ1 99 aa5.99□□□□□ -1.45
PTCHD4-202ENST00000398738 HRES1P13985 223 aa5.99□□□□□ -1.45
PTCHD4-202ENST00000398738 RETNLBQ9BQ08 111 aa5.99□□□□□ -1.45
PTCHD4-202ENST00000398738 CDC42SE1Q9NRR8 79 aa5.99□□□□□ -1.45
PTCHD4-202ENST00000398738 DNAH3Q8TD57 4116 aa5.98□□□□□ -1.45
PTCHD4-202ENST00000398738 A6NN06 94 aa5.97□□□□□ -1.45
PTCHD4-202ENST00000398738 KRTAP19-4Q3LI73 84 aa5.97□□□□□ -1.45
PTCHD4-202ENST00000398738 PRAC1Q96KF2 57 aa5.95□□□□□ -1.46
PTCHD4-202ENST00000398738 LINC01558Q9Y6Z2 57 aa5.95□□□□□ -1.46
PTCHD4-202ENST00000398738 DNAH9Q9NYC9 4486 aa5.95□□□□□ -1.46
PTCHD4-202ENST00000398738 SPRR1BP22528 89 aa5.94□□□□□ -1.46
PTCHD4-202ENST00000398738 Q96NJ1 140 aa5.94□□□□□ -1.46
PTCHD4-202ENST00000398738 DNAH1Q9P2D7 4330 aa5.94□□□□□ -1.46
PTCHD4-202ENST00000398738 TP53AIP1Q9HCN2 124 aa5.94□□□□□ -1.46
PTCHD4-202ENST00000398738 A0A1B0GVX0 72 aa5.93□□□□□ -1.46
PTCHD4-202ENST00000398738 MRPL34Q9BQ48 92 aaKnown RBP5.93□□□□□ -1.46
PTCHD4-202ENST00000398738 C7orf65Q6ZTY9 151 aa5.92□□□□□ -1.46
PTCHD4-202ENST00000398738 Q5W150 140 aa5.91□□□□□ -1.46
PTCHD4-202ENST00000398738 HUWE1Q7Z6Z7 4374 aaKnown RBP5.91□□□□□ -1.46
PTCHD4-202ENST00000398738 ADM2Q7Z4H4 148 aa5.91□□□□□ -1.46
PTCHD4-202ENST00000398738 C14orf177Q52M58 125 aa5.89□□□□□ -1.47
PTCHD4-202ENST00000398738 Q6ZR54 194 aa5.89□□□□□ -1.47
PTCHD4-202ENST00000398738 CIRBP-AS1Q8TBR5 109 aa5.89□□□□□ -1.47
PTCHD4-202ENST00000398738 LINC00313P59037 77 aa5.87□□□□□ -1.47
PTCHD4-202ENST00000398738 LCE3BQ5TA77 95 aa5.86□□□□□ -1.47
PTCHD4-202ENST00000398738 PLAC8Q9NZF1 115 aa5.85□□□□□ -1.47
PTCHD4-202ENST00000398738 KRTAP13-1Q8IUC0 172 aa5.85□□□□□ -1.47
PTCHD4-202ENST00000398738 PSORS1C2Q9UIG4 136 aa5.85□□□□□ -1.47
PTCHD4-202ENST00000398738 ASB16-AS1Q495Z4 193 aa5.84□□□□□ -1.47
PTCHD4-202ENST00000398738 FRAS1Q86XX4 4008 aa5.84□□□□□ -1.47
PTCHD4-202ENST00000398738 DNAH7Q8WXX0 4024 aa5.83□□□□□ -1.48
PTCHD4-202ENST00000398738 TGP01266 2768 aa5.83□□□□□ -1.48
PTCHD4-202ENST00000398738 ACYP2P14621 99 aa5.82□□□□□ -1.48
PTCHD4-202ENST00000398738 A0A1B0GU69 56 aa5.82□□□□□ -1.48
PTCHD4-202ENST00000398738 APLNQ9ULZ1 77 aa5.82□□□□□ -1.48
PTCHD4-202ENST00000398738 NBDYA0A0U1RRE5 68 aa5.81□□□□□ -1.48
PTCHD4-202ENST00000398738 SPACA4Q8TDM5 124 aa5.79□□□□□ -1.48
PTCHD4-202ENST00000398738 FBN3Q75N90 2809 aa5.78□□□□□ -1.48
PTCHD4-202ENST00000398738 KRTAP9-3Q9BYQ3 159 aa5.78□□□□□ -1.48
PTCHD4-202ENST00000398738 ZNF706Q9Y5V0 76 aaPredicted RBP5.78□□□□□ -1.48
PTCHD4-202ENST00000398738 SPINK1P00995 79 aa5.78□□□□□ -1.48
PTCHD4-202ENST00000398738 IGKV2D-30A0A075B6S6 120 aa5.77□□□□□ -1.49
PTCHD4-202ENST00000398738 C8orf87E5RJ46 101 aa5.77□□□□□ -1.49
PTCHD4-202ENST00000398738 IGKV2-30P06310 120 aa5.77□□□□□ -1.49
PTCHD4-202ENST00000398738 PLECQ15149 4684 aaKnown RBP5.77□□□□□ -1.49
PTCHD4-202ENST00000398738 ZNF861PO60384 105 aa5.76□□□□□ -1.49
PTCHD4-202ENST00000398738 IGLV5-52A0A0A0MRZ9 124 aa5.76□□□□□ -1.49
PTCHD4-202ENST00000398738 LINC00483Q53H64 154 aa5.76□□□□□ -1.49
PTCHD4-202ENST00000398738 DNAH8Q96JB1 4490 aa5.75□□□□□ -1.49
PTCHD4-202ENST00000398738 RTL8CO15255 209 aa5.75□□□□□ -1.49
PTCHD4-202ENST00000398738 SEC61BP60468 96 aaKnown RBP5.75□□□□□ -1.49
PTCHD4-202ENST00000398738 MIR22HGQ0VDD5 57 aa5.73□□□□□ -1.49
PTCHD4-202ENST00000398738 A0A087WTM6 91 aa5.73□□□□□ -1.49
PTCHD4-202ENST00000398738 Q6ZRN7 208 aaPredicted RBP5.73□□□□□ -1.49
PTCHD4-202ENST00000398738 PRKDCP78527 4128 aaKnown RBP5.73□□□□□ -1.49
PTCHD4-202ENST00000398738 KRTAP13-3Q3SY46 172 aa5.71□□□□□ -1.5
PTCHD4-202ENST00000398738 DMAC1Q96GE9 116 aa5.7□□□□□ -1.5
PTCHD4-202ENST00000398738 FLG2Q5D862 2391 aaPredicted RBP5.7□□□□□ -1.5
PTCHD4-202ENST00000398738 MEGF8Q7Z7M0 2845 aa5.7□□□□□ -1.5
PTCHD4-202ENST00000398738 UQCR11O14957 56 aa5.69□□□□□ -1.5
PTCHD4-202ENST00000398738 LINC01554Q52M75 96 aa5.69□□□□□ -1.5
PTCHD4-202ENST00000398738 CSAG1Q6PB30 78 aa5.69□□□□□ -1.5
PTCHD4-202ENST00000398738 IGLV7-43P04211 117 aa5.67□□□□□ -1.5
PTCHD4-202ENST00000398738 DNAH17Q9UFH2 4485 aa5.66□□□□□ -1.5
PTCHD4-202ENST00000398738 SPATA8Q6RVD6 105 aa5.66□□□□□ -1.5
PTCHD4-202ENST00000398738 KMT2AQ03164 3969 aa5.64□□□□□ -1.51
PTCHD4-202ENST00000398738 NUPR2A6NF83 97 aa5.62□□□□□ -1.51
PTCHD4-202ENST00000398738 STARD9Q9P2P6 4700 aa5.61□□□□□ -1.51
PTCHD4-202ENST00000398738 DYNC2H1Q8NCM8 4307 aaKnown RBP5.6□□□□□ -1.51
PTCHD4-202ENST00000398738 ALMS1Q8TCU4 4167 aa5.59□□□□□ -1.51
PTCHD4-202ENST00000398738 SSBP3-AS1Q7Z2R9 100 aa5.59□□□□□ -1.51
PTCHD4-202ENST00000398738 HECTD4Q9Y4D8 3996 aa5.59□□□□□ -1.52
PTCHD4-202ENST00000398738 DMBT1Q9UGM3 2413 aaPredicted RBP5.58□□□□□ -1.52
PTCHD4-202ENST00000398738 DNAH2Q9P225 4427 aa5.57□□□□□ -1.52
PTCHD4-202ENST00000398738 LY6G6CO95867 125 aa5.57□□□□□ -1.52
PTCHD4-202ENST00000398738 KRTAP13-2Q52LG2 175 aa5.57□□□□□ -1.52
PTCHD4-202ENST00000398738 CRIPTQ9P021 101 aa5.57□□□□□ -1.52
PTCHD4-202ENST00000398738 C1orf134Q5TEV5 83 aa5.56□□□□□ -1.52
PTCHD4-202ENST00000398738 DNAH11Q96DT5 4516 aa5.55□□□□□ -1.52
PTCHD4-202ENST00000398738 DNAH6Q9C0G6 4158 aa5.55□□□□□ -1.52
PTCHD4-202ENST00000398738 VPS13DQ5THJ4 4388 aa5.54□□□□□ -1.52
PTCHD4-202ENST00000398738 KRTAP16-1A8MUX0 517 aa5.52□□□□□ -1.53
PTCHD4-202ENST00000398738 LRP1BQ9NZR2 4599 aa5.51□□□□□ -1.53
PTCHD4-202ENST00000398738 TYMSOSQ8TAI1 123 aa5.49□□□□□ -1.53
PTCHD4-202ENST00000398738 C9orf92A6NGG3 77 aa5.48□□□□□ -1.53
PTCHD4-202ENST00000398738 Q6ZSA8 131 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms