RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 KRTAP13-1Q8IUC0 172 aa9□□□□□ -0.97
MCF2L-205ENST00000397017 PRR15LQ9BU68 103 aa8.99□□□□□ -0.97
MCF2L-205ENST00000397017 KLKP1Q107X0 134 aa8.96□□□□□ -0.97
MCF2L-205ENST00000397017 TP53AIP1Q9HCN2 124 aa8.96□□□□□ -0.98
MCF2L-205ENST00000397017 PRKDCP78527 4128 aaKnown RBP8.95□□□□□ -0.98
MCF2L-205ENST00000397017 NOTCH2NLQ7Z3S9 236 aa8.95□□□□□ -0.98
MCF2L-205ENST00000397017 MMP24-AS1A0A0U1RRL7 71 aa8.94□□□□□ -0.98
MCF2L-205ENST00000397017 A8MU10 97 aa8.94□□□□□ -0.98
MCF2L-205ENST00000397017 LINC00483Q53H64 154 aa8.94□□□□□ -0.98
MCF2L-205ENST00000397017 PLECQ15149 4684 aaKnown RBP8.93□□□□□ -0.98
MCF2L-205ENST00000397017 ATP5EP56381 51 aaPredicted RBP8.92□□□□□ -0.98
MCF2L-205ENST00000397017 DNAH10Q8IVF4 4471 aa8.91□□□□□ -0.98
MCF2L-205ENST00000397017 CD164Q04900 197 aa8.91□□□□□ -0.98
MCF2L-205ENST00000397017 KRTAP13-2Q52LG2 175 aa8.89□□□□□ -0.99
MCF2L-205ENST00000397017 Q5VSD8 79 aa8.89□□□□□ -0.99
MCF2L-205ENST00000397017 RBM12B-AS1Q9P1G2 102 aa8.88□□□□□ -0.99
MCF2L-205ENST00000397017 H3BS24 57 aa8.87□□□□□ -0.99
MCF2L-205ENST00000397017 C8orf87E5RJ46 101 aa8.87□□□□□ -0.99
MCF2L-205ENST00000397017 SPAG11AQ6PDA7 123 aa8.85□□□□□ -0.99
MCF2L-205ENST00000397017 LYSTQ99698 3801 aa8.82□□□□□ -1
MCF2L-205ENST00000397017 C7orf65Q6ZTY9 151 aa8.82□□□□□ -1
MCF2L-205ENST00000397017 Q6ZSA8 131 aa8.81□□□□□ -1
MCF2L-205ENST00000397017 STARD9Q9P2P6 4700 aa8.8□□□□□ -1
MCF2L-205ENST00000397017 J3QL48 77 aa8.8□□□□□ -1
MCF2L-205ENST00000397017 Q8N9P0 234 aaPredicted RBP8.78□□□□□ -1
MCF2L-205ENST00000397017 LOC101927531A0A1B0GV80 90 aa8.77□□□□□ -1.01
MCF2L-205ENST00000397017 H3BPC8 53 aa8.77□□□□□ -1.01
MCF2L-205ENST00000397017 CMYA5Q8N3K9 4069 aa8.77□□□□□ -1.01
MCF2L-205ENST00000397017 Q8N1X5 172 aa8.76□□□□□ -1.01
MCF2L-205ENST00000397017 KRTAP29-1A8MX34 341 aaPredicted RBP8.75□□□□□ -1.01
MCF2L-205ENST00000397017 ATP11AUNQ6ZP68 121 aa8.73□□□□□ -1.01
MCF2L-205ENST00000397017 KTN1-AS1Q86SY8 53 aa8.73□□□□□ -1.01
MCF2L-205ENST00000397017 COA5Q86WW8 74 aa8.73□□□□□ -1.01
MCF2L-205ENST00000397017 PRAC1Q96KF2 57 aa8.71□□□□□ -1.01
MCF2L-205ENST00000397017 KRTAP1-4P0C5Y4 121 aa8.7□□□□□ -1.02
MCF2L-205ENST00000397017 Q5W150 140 aa8.7□□□□□ -1.02
MCF2L-205ENST00000397017 IGLV7-46A0A075B6I9 117 aa8.69□□□□□ -1.02
MCF2L-205ENST00000397017 ACYP2P14621 99 aa8.68□□□□□ -1.02
MCF2L-205ENST00000397017 KMT2AQ03164 3969 aa8.67□□□□□ -1.02
MCF2L-205ENST00000397017 DNAH1Q9P2D7 4330 aa8.64□□□□□ -1.03
MCF2L-205ENST00000397017 HRES1P13985 223 aa8.64□□□□□ -1.03
MCF2L-205ENST00000397017 DNAH11Q96DT5 4516 aa8.62□□□□□ -1.03
MCF2L-205ENST00000397017 CYP4F30PQ9H0H9 118 aa8.61□□□□□ -1.03
MCF2L-205ENST00000397017 DNAH3Q8TD57 4116 aa8.6□□□□□ -1.03
MCF2L-205ENST00000397017 DNAH7Q8WXX0 4024 aa8.57□□□□□ -1.04
MCF2L-205ENST00000397017 Q5VV11 94 aa8.57□□□□□ -1.04
MCF2L-205ENST00000397017 Q1T7F1 81 aa8.56□□□□□ -1.04
MCF2L-205ENST00000397017 A0A1B0GVY2 172 aa8.55□□□□□ -1.04
MCF2L-205ENST00000397017 ZCCHC13Q8WW36 166 aaKnown RBP8.55□□□□□ -1.04
MCF2L-205ENST00000397017 A0A1B0GU69 56 aa8.52□□□□□ -1.04
MCF2L-205ENST00000397017 SPANXA2-OT1Q8N9U9 137 aa8.52□□□□□ -1.05
MCF2L-205ENST00000397017 VPS13DQ5THJ4 4388 aa8.5□□□□□ -1.05
MCF2L-205ENST00000397017 SPINK7P58062 85 aa8.5□□□□□ -1.05
MCF2L-205ENST00000397017 LCA10Q71F78 164 aa8.48□□□□□ -1.05
MCF2L-205ENST00000397017 ADM2Q7Z4H4 148 aa8.47□□□□□ -1.05
MCF2L-205ENST00000397017 ASB16-AS1Q495Z4 193 aa8.46□□□□□ -1.06
MCF2L-205ENST00000397017 DNAH5Q8TE73 4624 aa8.44□□□□□ -1.06
MCF2L-205ENST00000397017 FAT1Q14517 4588 aa8.41□□□□□ -1.06
MCF2L-205ENST00000397017 CDC42SE1Q9NRR8 79 aa8.36□□□□□ -1.07
MCF2L-205ENST00000397017 LINC01554Q52M75 96 aa8.35□□□□□ -1.07
MCF2L-205ENST00000397017 LRP1BQ9NZR2 4599 aa8.35□□□□□ -1.07
MCF2L-205ENST00000397017 COX6B2Q6YFQ2 88 aa8.35□□□□□ -1.07
MCF2L-205ENST00000397017 DNAH2Q9P225 4427 aa8.31□□□□□ -1.08
MCF2L-205ENST00000397017 HYDINQ4G0P3 5121 aa8.31□□□□□ -1.08
MCF2L-205ENST00000397017 DNAH6Q9C0G6 4158 aa8.29□□□□□ -1.08
MCF2L-205ENST00000397017 RPS29P62273 56 aaKnown RBP8.29□□□□□ -1.08
MCF2L-205ENST00000397017 A6NN06 94 aa8.28□□□□□ -1.08
MCF2L-205ENST00000397017 DNAH17Q9UFH2 4485 aa8.27□□□□□ -1.08
MCF2L-205ENST00000397017 DNAH8Q96JB1 4490 aa8.27□□□□□ -1.09
MCF2L-205ENST00000397017 DYNC1H1Q14204 4646 aaKnown RBP8.25□□□□□ -1.09
MCF2L-205ENST00000397017 Q75L30 129 aa8.25□□□□□ -1.09
MCF2L-205ENST00000397017 DMAC1Q96GE9 116 aa8.25□□□□□ -1.09
MCF2L-205ENST00000397017 CSAG1Q6PB30 78 aa8.24□□□□□ -1.09
MCF2L-205ENST00000397017 DYNC2H1Q8NCM8 4307 aaKnown RBP8.24□□□□□ -1.09
MCF2L-205ENST00000397017 KRTAP16-1A8MUX0 517 aa8.24□□□□□ -1.09
MCF2L-205ENST00000397017 FRAS1Q86XX4 4008 aa8.22□□□□□ -1.09
MCF2L-205ENST00000397017 CRIPTQ9P021 101 aa8.21□□□□□ -1.1
MCF2L-205ENST00000397017 A0A0D9SG42 100 aa8.19□□□□□ -1.1
MCF2L-205ENST00000397017 UQCR11O14957 56 aa8.19□□□□□ -1.1
MCF2L-205ENST00000397017 K7ERS5 55 aa8.19□□□□□ -1.1
MCF2L-205ENST00000397017 KRTAP10-8P60410 259 aa8.17□□□□□ -1.1
MCF2L-205ENST00000397017 KIAA1109Q2LD37 5005 aa8.17□□□□□ -1.1
MCF2L-205ENST00000397017 A8MUU9 505 aa8.17□□□□□ -1.1
MCF2L-205ENST00000397017 KMT2CQ8NEZ4 4911 aaKnown RBP8.16□□□□□ -1.1
MCF2L-205ENST00000397017 MIR22HGQ0VDD5 57 aa8.16□□□□□ -1.1
MCF2L-205ENST00000397017 PKHD1P08F94 4074 aa8.15□□□□□ -1.1
MCF2L-205ENST00000397017 C20orf166-AS1Q96NR2 134 aa8.15□□□□□ -1.11
MCF2L-205ENST00000397017 XP32Q5T750 250 aa8.14□□□□□ -1.11
MCF2L-205ENST00000397017 ALMS1Q8TCU4 4167 aa8.14□□□□□ -1.11
MCF2L-205ENST00000397017 LINC01558Q9Y6Z2 57 aa8.14□□□□□ -1.11
MCF2L-205ENST00000397017 SACSQ9NZJ4 4579 aa8.13□□□□□ -1.11
MCF2L-205ENST00000397017 KRTAP4-5Q9BYR2 181 aa8.13□□□□□ -1.11
MCF2L-205ENST00000397017 KRTAP10-4P60372 401 aaPredicted RBP8.12□□□□□ -1.11
MCF2L-205ENST00000397017 RPL37P61927 97 aaKnown RBP8.12□□□□□ -1.11
MCF2L-205ENST00000397017 HECTD4Q9Y4D8 3996 aa8.11□□□□□ -1.11
MCF2L-205ENST00000397017 VPS13BQ7Z7G8 4022 aa8.09□□□□□ -1.11
MCF2L-205ENST00000397017 S4R3F8 94 aa8.08□□□□□ -1.12
MCF2L-205ENST00000397017 SEC61BP60468 96 aaKnown RBP8.08□□□□□ -1.12
MCF2L-205ENST00000397017 KRTAP13-3Q3SY46 172 aa8.06□□□□□ -1.12
MCF2L-205ENST00000397017 RYR3Q15413 4870 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms