RNA–Protein interactions for RNA: ENST00000395358.7

RAPGEF3-202, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-202ENST00000395358 TRRAPQ9Y4A5 3859 aa6.99□□□□□ -1.29
RAPGEF3-202ENST00000395358 RTL8CO15255 209 aa6.99□□□□□ -1.29
RAPGEF3-202ENST00000395358 A0A1B0GVX0 72 aa6.97□□□□□ -1.29
RAPGEF3-202ENST00000395358 LINC00472Q9H8W2 130 aa6.95□□□□□ -1.3
RAPGEF3-202ENST00000395358 KRTAP16-1A8MUX0 517 aa6.94□□□□□ -1.3
RAPGEF3-202ENST00000395358 KRTAP25-1Q3LHN0 102 aa6.93□□□□□ -1.3
RAPGEF3-202ENST00000395358 PLAC8Q9NZF1 115 aa6.93□□□□□ -1.3
RAPGEF3-202ENST00000395358 DMBT1Q9UGM3 2413 aaPredicted RBP6.91□□□□□ -1.3
RAPGEF3-202ENST00000395358 A0A087WTM6 91 aa6.91□□□□□ -1.3
RAPGEF3-202ENST00000395358 PLA2G2DQ9UNK4 145 aa6.91□□□□□ -1.3
RAPGEF3-202ENST00000395358 SPRR1AP35321 89 aa6.9□□□□□ -1.3
RAPGEF3-202ENST00000395358 A0A087X002 238 aa6.89□□□□□ -1.31
RAPGEF3-202ENST00000395358 CIRBP-AS1Q8TBR5 109 aa6.88□□□□□ -1.31
RAPGEF3-202ENST00000395358 KRTAP1-5Q9BYS1 174 aa6.88□□□□□ -1.31
RAPGEF3-202ENST00000395358 NDUFAF8A1L188 74 aa6.87□□□□□ -1.31
RAPGEF3-202ENST00000395358 FAM229AH3BQW9 127 aa6.87□□□□□ -1.31
RAPGEF3-202ENST00000395358 TLX1NBP0CAT3 122 aa6.86□□□□□ -1.31
RAPGEF3-202ENST00000395358 TENM2Q9NT68 2774 aa6.85□□□□□ -1.31
RAPGEF3-202ENST00000395358 ZNF861PO60384 105 aa6.85□□□□□ -1.31
RAPGEF3-202ENST00000395358 KRTAP4-16G5E9R7 235 aaPredicted RBP6.84□□□□□ -1.31
RAPGEF3-202ENST00000395358 DMAC1Q96GE9 116 aa6.83□□□□□ -1.32
RAPGEF3-202ENST00000395358 IGLV7-43P04211 117 aa6.83□□□□□ -1.32
RAPGEF3-202ENST00000395358 CHTF8P0CG12 524 aa6.82□□□□□ -1.32
RAPGEF3-202ENST00000395358 KRTAP26-1Q6PEX3 210 aa6.81□□□□□ -1.32
RAPGEF3-202ENST00000395358 TGP01266 2768 aa6.81□□□□□ -1.32
RAPGEF3-202ENST00000395358 A8MUU9 505 aa6.8□□□□□ -1.32
RAPGEF3-202ENST00000395358 A0A1B0GU33 70 aa6.76□□□□□ -1.33
RAPGEF3-202ENST00000395358 LUZP6Q538Z0 58 aa6.75□□□□□ -1.33
RAPGEF3-202ENST00000395358 FBN3Q75N90 2809 aa6.74□□□□□ -1.33
RAPGEF3-202ENST00000395358 Q5W150 140 aa6.74□□□□□ -1.33
RAPGEF3-202ENST00000395358 Q8N1X5 172 aa6.74□□□□□ -1.33
RAPGEF3-202ENST00000395358 LINC00483Q53H64 154 aa6.73□□□□□ -1.33
RAPGEF3-202ENST00000395358 ANAPC11Q9NYG5 84 aa6.72□□□□□ -1.33
RAPGEF3-202ENST00000395358 Q6ZRN7 208 aaPredicted RBP6.71□□□□□ -1.34
RAPGEF3-202ENST00000395358 NOTCH2NLQ7Z3S9 236 aa6.71□□□□□ -1.34
RAPGEF3-202ENST00000395358 C20orf166-AS1Q96NR2 134 aa6.69□□□□□ -1.34
RAPGEF3-202ENST00000395358 SPRR1BP22528 89 aa6.67□□□□□ -1.34
RAPGEF3-202ENST00000395358 LINC00304Q8N9R0 145 aa6.67□□□□□ -1.34
RAPGEF3-202ENST00000395358 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.67□□□□□ -1.34
RAPGEF3-202ENST00000395358 MEGF8Q7Z7M0 2845 aa6.66□□□□□ -1.34
RAPGEF3-202ENST00000395358 SPACA4Q8TDM5 124 aa6.65□□□□□ -1.34
RAPGEF3-202ENST00000395358 A0A0D9SG42 100 aa6.65□□□□□ -1.35
RAPGEF3-202ENST00000395358 KRTAP10-2P60368 255 aa6.65□□□□□ -1.35
RAPGEF3-202ENST00000395358 PSORS1C2Q9UIG4 136 aa6.63□□□□□ -1.35
RAPGEF3-202ENST00000395358 KRTAP7-1Q8IUC3 87 aa6.63□□□□□ -1.35
RAPGEF3-202ENST00000395358 SMR3BP02814 79 aaPredicted RBP6.61□□□□□ -1.35
RAPGEF3-202ENST00000395358 P0C880 135 aa6.59□□□□□ -1.35
RAPGEF3-202ENST00000395358 ANK2Q01484 3957 aa6.59□□□□□ -1.35
RAPGEF3-202ENST00000395358 KRTAP10-1P60331 282 aa6.59□□□□□ -1.35
RAPGEF3-202ENST00000395358 KRTAP11-1Q8IUC1 163 aa6.59□□□□□ -1.36
RAPGEF3-202ENST00000395358 PANO1I0J062 215 aa6.57□□□□□ -1.36
RAPGEF3-202ENST00000395358 Q96NJ1 140 aa6.57□□□□□ -1.36
RAPGEF3-202ENST00000395358 DNHD1Q96M86 4753 aa6.57□□□□□ -1.36
RAPGEF3-202ENST00000395358 H1FX-AS1Q4G0G2 97 aa6.54□□□□□ -1.36
RAPGEF3-202ENST00000395358 HUWE1Q7Z6Z7 4374 aaKnown RBP6.54□□□□□ -1.36
RAPGEF3-202ENST00000395358 Q6ZSA8 131 aa6.49□□□□□ -1.37
RAPGEF3-202ENST00000395358 DNAH9Q9NYC9 4486 aa6.49□□□□□ -1.37
RAPGEF3-202ENST00000395358 H0YAA0 97 aa6.48□□□□□ -1.37
RAPGEF3-202ENST00000395358 RPL37P61927 97 aaKnown RBP6.47□□□□□ -1.37
RAPGEF3-202ENST00000395358 TYMSOSQ8TAI1 123 aa6.47□□□□□ -1.37
RAPGEF3-202ENST00000395358 COL7A1Q02388 2944 aa6.46□□□□□ -1.38
RAPGEF3-202ENST00000395358 C10orf95Q9H7T3 257 aa6.42□□□□□ -1.38
RAPGEF3-202ENST00000395358 CMYA5Q8N3K9 4069 aa6.39□□□□□ -1.39
RAPGEF3-202ENST00000395358 Q5VSD8 79 aa6.39□□□□□ -1.39
RAPGEF3-202ENST00000395358 DNAH3Q8TD57 4116 aa6.38□□□□□ -1.39
RAPGEF3-202ENST00000395358 PRKDCP78527 4128 aaKnown RBP6.38□□□□□ -1.39
RAPGEF3-202ENST00000395358 SRRM2Q9UQ35 2752 aaKnown RBP6.36□□□□□ -1.39
RAPGEF3-202ENST00000395358 J3QL48 77 aa6.35□□□□□ -1.39
RAPGEF3-202ENST00000395358 SEC61BP60468 96 aaKnown RBP6.34□□□□□ -1.39
RAPGEF3-202ENST00000395358 A0A1B0GVY2 172 aa6.33□□□□□ -1.4
RAPGEF3-202ENST00000395358 KRTAP13-3Q3SY46 172 aa6.31□□□□□ -1.4
RAPGEF3-202ENST00000395358 COX6B2Q6YFQ2 88 aa6.31□□□□□ -1.4
RAPGEF3-202ENST00000395358 CSMD3Q7Z407 3707 aa6.29□□□□□ -1.4
RAPGEF3-202ENST00000395358 KRTAP13-1Q8IUC0 172 aa6.28□□□□□ -1.4
RAPGEF3-202ENST00000395358 C9orf92A6NGG3 77 aa6.27□□□□□ -1.41
RAPGEF3-202ENST00000395358 PLECQ15149 4684 aaKnown RBP6.25□□□□□ -1.41
RAPGEF3-202ENST00000395358 TPRXLQ17RH7 258 aa6.23□□□□□ -1.41
RAPGEF3-202ENST00000395358 STARD9Q9P2P6 4700 aa6.21□□□□□ -1.42
RAPGEF3-202ENST00000395358 LYSTQ99698 3801 aa6.2□□□□□ -1.42
RAPGEF3-202ENST00000395358 ALMS1Q8TCU4 4167 aa6.18□□□□□ -1.42
RAPGEF3-202ENST00000395358 KRTAP15-1Q3LI76 137 aa6.17□□□□□ -1.42
RAPGEF3-202ENST00000395358 VPS13DQ5THJ4 4388 aa6.14□□□□□ -1.43
RAPGEF3-202ENST00000395358 KRTAP13-2Q52LG2 175 aa6.13□□□□□ -1.43
RAPGEF3-202ENST00000395358 KRTAP1-4P0C5Y4 121 aa6.1□□□□□ -1.43
RAPGEF3-202ENST00000395358 S4R3F8 94 aa6.09□□□□□ -1.43
RAPGEF3-202ENST00000395358 DNAH10Q8IVF4 4471 aa6.07□□□□□ -1.44
RAPGEF3-202ENST00000395358 PLAC4Q8WY50 150 aa6.07□□□□□ -1.44
RAPGEF3-202ENST00000395358 DNAH1Q9P2D7 4330 aa6.06□□□□□ -1.44
RAPGEF3-202ENST00000395358 RPS29P62273 56 aaKnown RBP6.05□□□□□ -1.44
RAPGEF3-202ENST00000395358 DNAH7Q8WXX0 4024 aa6.04□□□□□ -1.44
RAPGEF3-202ENST00000395358 DYNC2H1Q8NCM8 4307 aaKnown RBP6.03□□□□□ -1.44
RAPGEF3-202ENST00000395358 CAMK2N1Q7Z7J9 78 aa6.03□□□□□ -1.44
RAPGEF3-202ENST00000395358 KMT2AQ03164 3969 aa6□□□□□ -1.45
RAPGEF3-202ENST00000395358 DNAH17Q9UFH2 4485 aa5.94□□□□□ -1.46
RAPGEF3-202ENST00000395358 DNAH5Q8TE73 4624 aa5.93□□□□□ -1.46
RAPGEF3-202ENST00000395358 KRTAP10-8P60410 259 aa5.93□□□□□ -1.46
RAPGEF3-202ENST00000395358 DNAH11Q96DT5 4516 aa5.92□□□□□ -1.46
RAPGEF3-202ENST00000395358 SACSQ9NZJ4 4579 aa5.91□□□□□ -1.46
RAPGEF3-202ENST00000395358 KRTAP10-4P60372 401 aaPredicted RBP5.9□□□□□ -1.47
RAPGEF3-202ENST00000395358 DNAH6Q9C0G6 4158 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms