RNA–Protein interactions for RNA: ENST00000392502.8

TRA2A-202, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-202ENST00000392502 TENM2Q9NT68 2774 aa9.91□□□□□ -0.82
TRA2A-202ENST00000392502 NOTCH2NLQ7Z3S9 236 aa9.9□□□□□ -0.82
TRA2A-202ENST00000392502 CSMD3Q7Z407 3707 aa9.9□□□□□ -0.82
TRA2A-202ENST00000392502 ZNF861PO60384 105 aa9.9□□□□□ -0.83
TRA2A-202ENST00000392502 SPRR1BP22528 89 aa9.9□□□□□ -0.83
TRA2A-202ENST00000392502 DYNC2H1Q8NCM8 4307 aaKnown RBP9.89□□□□□ -0.83
TRA2A-202ENST00000392502 C8orf17Q9NRJ1 99 aa9.88□□□□□ -0.83
TRA2A-202ENST00000392502 DMAC1Q96GE9 116 aa9.84□□□□□ -0.83
TRA2A-202ENST00000392502 PLECQ15149 4684 aaKnown RBP9.84□□□□□ -0.83
TRA2A-202ENST00000392502 KRTAP25-1Q3LHN0 102 aa9.83□□□□□ -0.84
TRA2A-202ENST00000392502 MRPL34Q9BQ48 92 aaKnown RBP9.83□□□□□ -0.84
TRA2A-202ENST00000392502 APLNQ9ULZ1 77 aa9.79□□□□□ -0.84
TRA2A-202ENST00000392502 A0A096LNI7 61 aa9.78□□□□□ -0.84
TRA2A-202ENST00000392502 UBE2DNLQ8IWF7 75 aa9.77□□□□□ -0.85
TRA2A-202ENST00000392502 A0A1B0GVX0 72 aa9.76□□□□□ -0.85
TRA2A-202ENST00000392502 C14orf177Q52M58 125 aa9.76□□□□□ -0.85
TRA2A-202ENST00000392502 Q96NJ1 140 aa9.74□□□□□ -0.85
TRA2A-202ENST00000392502 PRKDCP78527 4128 aaKnown RBP9.73□□□□□ -0.85
TRA2A-202ENST00000392502 ALMS1Q8TCU4 4167 aa9.72□□□□□ -0.85
TRA2A-202ENST00000392502 MEGF8Q7Z7M0 2845 aa9.72□□□□□ -0.85
TRA2A-202ENST00000392502 CDK2AP2O75956 126 aa9.72□□□□□ -0.85
TRA2A-202ENST00000392502 CHTF8P0CG12 524 aa9.72□□□□□ -0.85
TRA2A-202ENST00000392502 SRRM2Q9UQ35 2752 aaKnown RBP9.71□□□□□ -0.86
TRA2A-202ENST00000392502 STARD9Q9P2P6 4700 aa9.71□□□□□ -0.86
TRA2A-202ENST00000392502 NUPR2A6NF83 97 aa9.7□□□□□ -0.86
TRA2A-202ENST00000392502 PRLHP81277 87 aa9.7□□□□□ -0.86
TRA2A-202ENST00000392502 KRTAP11-1Q8IUC1 163 aa9.69□□□□□ -0.86
TRA2A-202ENST00000392502 IGLV7-43P04211 117 aa9.68□□□□□ -0.86
TRA2A-202ENST00000392502 KRTAP13-3Q3SY46 172 aa9.68□□□□□ -0.86
TRA2A-202ENST00000392502 VPS13DQ5THJ4 4388 aa9.67□□□□□ -0.86
TRA2A-202ENST00000392502 IGLV5-52A0A0A0MRZ9 124 aa9.62□□□□□ -0.87
TRA2A-202ENST00000392502 NBDYA0A0U1RRE5 68 aa9.62□□□□□ -0.87
TRA2A-202ENST00000392502 A8MUU9 505 aa9.62□□□□□ -0.87
TRA2A-202ENST00000392502 PANO1I0J062 215 aa9.61□□□□□ -0.87
TRA2A-202ENST00000392502 Q6ZRN7 208 aaPredicted RBP9.6□□□□□ -0.87
TRA2A-202ENST00000392502 A0A0A0MQY5 61 aa9.59□□□□□ -0.87
TRA2A-202ENST00000392502 HECTD4Q9Y4D8 3996 aa9.58□□□□□ -0.88
TRA2A-202ENST00000392502 KMT2AQ03164 3969 aa9.57□□□□□ -0.88
TRA2A-202ENST00000392502 DNAH2Q9P225 4427 aa9.57□□□□□ -0.88
TRA2A-202ENST00000392502 P0C880 135 aa9.57□□□□□ -0.88
TRA2A-202ENST00000392502 LINC00483Q53H64 154 aa9.57□□□□□ -0.88
TRA2A-202ENST00000392502 Q5W150 140 aa9.55□□□□□ -0.88
TRA2A-202ENST00000392502 LINC00304Q8N9R0 145 aa9.5□□□□□ -0.89
TRA2A-202ENST00000392502 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.5□□□□□ -0.89
TRA2A-202ENST00000392502 LY6G6CO95867 125 aa9.5□□□□□ -0.89
TRA2A-202ENST00000392502 FAM229AH3BQW9 127 aa9.49□□□□□ -0.89
TRA2A-202ENST00000392502 DNAH17Q9UFH2 4485 aa9.49□□□□□ -0.89
TRA2A-202ENST00000392502 TGP01266 2768 aa9.48□□□□□ -0.89
TRA2A-202ENST00000392502 A0A087WTM6 91 aa9.45□□□□□ -0.9
TRA2A-202ENST00000392502 IGKV2-30P06310 120 aa9.44□□□□□ -0.9
TRA2A-202ENST00000392502 SPACA4Q8TDM5 124 aa9.44□□□□□ -0.9
TRA2A-202ENST00000392502 DNAH8Q96JB1 4490 aa9.44□□□□□ -0.9
TRA2A-202ENST00000392502 KRTAP13-1Q8IUC0 172 aa9.44□□□□□ -0.9
TRA2A-202ENST00000392502 FRAS1Q86XX4 4008 aa9.44□□□□□ -0.9
TRA2A-202ENST00000392502 KRTAP16-1A8MUX0 517 aa9.4□□□□□ -0.91
TRA2A-202ENST00000392502 WWC2-AS2Q96NR7 200 aa9.4□□□□□ -0.91
TRA2A-202ENST00000392502 IGLV9-49A0A0B4J1Y8 123 aa9.36□□□□□ -0.91
TRA2A-202ENST00000392502 K7ERS5 55 aa9.35□□□□□ -0.91
TRA2A-202ENST00000392502 DNAH6Q9C0G6 4158 aa9.34□□□□□ -0.91
TRA2A-202ENST00000392502 C20orf166-AS1Q96NR2 134 aa9.33□□□□□ -0.92
TRA2A-202ENST00000392502 PSORS1C2Q9UIG4 136 aa9.32□□□□□ -0.92
TRA2A-202ENST00000392502 H0YAA0 97 aa9.32□□□□□ -0.92
TRA2A-202ENST00000392502 IGKV2D-30A0A075B6S6 120 aa9.31□□□□□ -0.92
TRA2A-202ENST00000392502 ANAPC11Q9NYG5 84 aa9.3□□□□□ -0.92
TRA2A-202ENST00000392502 DNAH5Q8TE73 4624 aa9.29□□□□□ -0.92
TRA2A-202ENST00000392502 DNAH11Q96DT5 4516 aa9.29□□□□□ -0.92
TRA2A-202ENST00000392502 Q6ZSA8 131 aa9.29□□□□□ -0.92
TRA2A-202ENST00000392502 SPINT4Q6UDR6 99 aa9.26□□□□□ -0.93
TRA2A-202ENST00000392502 SSBP3-AS1Q7Z2R9 100 aa9.23□□□□□ -0.93
TRA2A-202ENST00000392502 A0A1B0GU33 70 aa9.21□□□□□ -0.93
TRA2A-202ENST00000392502 NDUFAF8A1L188 74 aa9.21□□□□□ -0.93
TRA2A-202ENST00000392502 HYDINQ4G0P3 5121 aa9.2□□□□□ -0.94
TRA2A-202ENST00000392502 PKD1P98161 4303 aa9.18□□□□□ -0.94
TRA2A-202ENST00000392502 KRTAP10-2P60368 255 aa9.18□□□□□ -0.94
TRA2A-202ENST00000392502 KRTAP15-1Q3LI76 137 aa9.17□□□□□ -0.94
TRA2A-202ENST00000392502 SPINK6Q6UWN8 80 aa9.17□□□□□ -0.94
TRA2A-202ENST00000392502 FAT2Q9NYQ8 4349 aa9.16□□□□□ -0.94
TRA2A-202ENST00000392502 H1FX-AS1Q4G0G2 97 aa9.15□□□□□ -0.95
TRA2A-202ENST00000392502 LRP1BQ9NZR2 4599 aa9.13□□□□□ -0.95
TRA2A-202ENST00000392502 CIRBP-AS1Q8TBR5 109 aa9.12□□□□□ -0.95
TRA2A-202ENST00000392502 SPINK1P00995 79 aa9.07□□□□□ -0.96
TRA2A-202ENST00000392502 KRTAP10-1P60331 282 aa9.05□□□□□ -0.96
TRA2A-202ENST00000392502 CRIPTQ9P021 101 aa9.05□□□□□ -0.96
TRA2A-202ENST00000392502 SACSQ9NZJ4 4579 aa9.04□□□□□ -0.96
TRA2A-202ENST00000392502 VPS13BQ7Z7G8 4022 aa9.01□□□□□ -0.97
TRA2A-202ENST00000392502 KMT2CQ8NEZ4 4911 aaKnown RBP8.96□□□□□ -0.97
TRA2A-202ENST00000392502 LUZP6Q538Z0 58 aa8.96□□□□□ -0.97
TRA2A-202ENST00000392502 TYMSOSQ8TAI1 123 aa8.96□□□□□ -0.97
TRA2A-202ENST00000392502 PKHD1P08F94 4074 aa8.96□□□□□ -0.97
TRA2A-202ENST00000392502 KRTAP13-2Q52LG2 175 aa8.95□□□□□ -0.98
TRA2A-202ENST00000392502 TPRXLQ17RH7 258 aa8.93□□□□□ -0.98
TRA2A-202ENST00000392502 COX6B2Q6YFQ2 88 aa8.92□□□□□ -0.98
TRA2A-202ENST00000392502 RYR3Q15413 4870 aa8.91□□□□□ -0.98
TRA2A-202ENST00000392502 RYR2Q92736 4967 aa8.89□□□□□ -0.99
TRA2A-202ENST00000392502 RPL37P61927 97 aaKnown RBP8.88□□□□□ -0.99
TRA2A-202ENST00000392502 KRTAP1-4P0C5Y4 121 aa8.87□□□□□ -0.99
TRA2A-202ENST00000392502 Q8N1X5 172 aa8.87□□□□□ -0.99
TRA2A-202ENST00000392502 DYNC1H1Q14204 4646 aaKnown RBP8.82□□□□□ -1
TRA2A-202ENST00000392502 SEC61BP60468 96 aaKnown RBP8.77□□□□□ -1.01
TRA2A-202ENST00000392502 FLG2Q5D862 2391 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms