RNA–Protein interactions for RNA: ENST00000391945.8

ERCC2-204, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC2, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-204ENST00000391945 A0A087X002 238 aa7.63□□□□□ -1.19
ERCC2-204ENST00000391945 FAM229BQ4G0N7 80 aa7.62□□□□□ -1.19
ERCC2-204ENST00000391945 COA5Q86WW8 74 aa7.61□□□□□ -1.19
ERCC2-204ENST00000391945 MMP24-AS1A0A0U1RRL7 71 aa7.61□□□□□ -1.19
ERCC2-204ENST00000391945 LINC00483Q53H64 154 aa7.61□□□□□ -1.19
ERCC2-204ENST00000391945 KRTAP13-1Q8IUC0 172 aa7.6□□□□□ -1.19
ERCC2-204ENST00000391945 LCA10Q71F78 164 aa7.59□□□□□ -1.2
ERCC2-204ENST00000391945 SRRM2Q9UQ35 2752 aaKnown RBP7.58□□□□□ -1.2
ERCC2-204ENST00000391945 COL7A1Q02388 2944 aa7.57□□□□□ -1.2
ERCC2-204ENST00000391945 MEGF8Q7Z7M0 2845 aa7.57□□□□□ -1.2
ERCC2-204ENST00000391945 C7orf65Q6ZTY9 151 aa7.56□□□□□ -1.2
ERCC2-204ENST00000391945 LOC101927531A0A1B0GV80 90 aa7.56□□□□□ -1.2
ERCC2-204ENST00000391945 ATP11AUNQ6ZP68 121 aa7.55□□□□□ -1.2
ERCC2-204ENST00000391945 ACYP2P14621 99 aa7.53□□□□□ -1.2
ERCC2-204ENST00000391945 HUWE1Q7Z6Z7 4374 aaKnown RBP7.51□□□□□ -1.21
ERCC2-204ENST00000391945 KRTAP29-1A8MX34 341 aaPredicted RBP7.5□□□□□ -1.21
ERCC2-204ENST00000391945 Q5VSD8 79 aa7.49□□□□□ -1.21
ERCC2-204ENST00000391945 CSMD3Q7Z407 3707 aa7.49□□□□□ -1.21
ERCC2-204ENST00000391945 SPANXA2-OT1Q8N9U9 137 aa7.49□□□□□ -1.21
ERCC2-204ENST00000391945 NOTCH2NLQ7Z3S9 236 aa7.48□□□□□ -1.21
ERCC2-204ENST00000391945 J3QL48 77 aa7.48□□□□□ -1.21
ERCC2-204ENST00000391945 KRTAP13-2Q52LG2 175 aa7.47□□□□□ -1.21
ERCC2-204ENST00000391945 CYP4F30PQ9H0H9 118 aa7.47□□□□□ -1.21
ERCC2-204ENST00000391945 Q8N9P0 234 aaPredicted RBP7.45□□□□□ -1.22
ERCC2-204ENST00000391945 Q6ZSA8 131 aa7.45□□□□□ -1.22
ERCC2-204ENST00000391945 A0A1B0GU69 56 aa7.44□□□□□ -1.22
ERCC2-204ENST00000391945 ZCCHC13Q8WW36 166 aaKnown RBP7.43□□□□□ -1.22
ERCC2-204ENST00000391945 IGLV7-46A0A075B6I9 117 aa7.43□□□□□ -1.22
ERCC2-204ENST00000391945 Q1T7F1 81 aa7.41□□□□□ -1.22
ERCC2-204ENST00000391945 LINC01554Q52M75 96 aa7.39□□□□□ -1.23
ERCC2-204ENST00000391945 Q8N1X5 172 aa7.39□□□□□ -1.23
ERCC2-204ENST00000391945 PRAC1Q96KF2 57 aa7.38□□□□□ -1.23
ERCC2-204ENST00000391945 HRES1P13985 223 aa7.38□□□□□ -1.23
ERCC2-204ENST00000391945 DNAH9Q9NYC9 4486 aa7.35□□□□□ -1.23
ERCC2-204ENST00000391945 Q5W150 140 aa7.34□□□□□ -1.23
ERCC2-204ENST00000391945 CDC42SE1Q9NRR8 79 aa7.32□□□□□ -1.24
ERCC2-204ENST00000391945 KRTAP1-4P0C5Y4 121 aa7.31□□□□□ -1.24
ERCC2-204ENST00000391945 DNHD1Q96M86 4753 aa7.31□□□□□ -1.24
ERCC2-204ENST00000391945 K7ERS5 55 aa7.28□□□□□ -1.24
ERCC2-204ENST00000391945 Q5VV11 94 aa7.27□□□□□ -1.25
ERCC2-204ENST00000391945 ASB16-AS1Q495Z4 193 aa7.26□□□□□ -1.25
ERCC2-204ENST00000391945 ANK2Q01484 3957 aa7.23□□□□□ -1.25
ERCC2-204ENST00000391945 PLECQ15149 4684 aaKnown RBP7.23□□□□□ -1.25
ERCC2-204ENST00000391945 SPINK7P58062 85 aa7.21□□□□□ -1.25
ERCC2-204ENST00000391945 UQCR11O14957 56 aa7.21□□□□□ -1.26
ERCC2-204ENST00000391945 A8MU10 97 aa7.2□□□□□ -1.26
ERCC2-204ENST00000391945 SPINT4Q6UDR6 99 aa7.2□□□□□ -1.26
ERCC2-204ENST00000391945 LINC01558Q9Y6Z2 57 aa7.19□□□□□ -1.26
ERCC2-204ENST00000391945 Q75L30 129 aa7.18□□□□□ -1.26
ERCC2-204ENST00000391945 PRKDCP78527 4128 aaKnown RBP7.18□□□□□ -1.26
ERCC2-204ENST00000391945 A0A1B0GVY2 172 aa7.17□□□□□ -1.26
ERCC2-204ENST00000391945 MIR22HGQ0VDD5 57 aa7.17□□□□□ -1.26
ERCC2-204ENST00000391945 DNAH10Q8IVF4 4471 aa7.15□□□□□ -1.27
ERCC2-204ENST00000391945 RPS29P62273 56 aaKnown RBP7.13□□□□□ -1.27
ERCC2-204ENST00000391945 DMAC1Q96GE9 116 aa7.12□□□□□ -1.27
ERCC2-204ENST00000391945 CSAG1Q6PB30 78 aa7.11□□□□□ -1.27
ERCC2-204ENST00000391945 COX6B2Q6YFQ2 88 aa7.11□□□□□ -1.27
ERCC2-204ENST00000391945 STARD9Q9P2P6 4700 aa7.1□□□□□ -1.27
ERCC2-204ENST00000391945 A6NN06 94 aa7.06□□□□□ -1.28
ERCC2-204ENST00000391945 DNAH1Q9P2D7 4330 aa7.03□□□□□ -1.28
ERCC2-204ENST00000391945 CMYA5Q8N3K9 4069 aa7.03□□□□□ -1.28
ERCC2-204ENST00000391945 ADM2Q7Z4H4 148 aa7.01□□□□□ -1.29
ERCC2-204ENST00000391945 A0A0A0MQY5 61 aa6.99□□□□□ -1.29
ERCC2-204ENST00000391945 DNAH11Q96DT5 4516 aa6.99□□□□□ -1.29
ERCC2-204ENST00000391945 DNAH3Q8TD57 4116 aa6.98□□□□□ -1.29
ERCC2-204ENST00000391945 VPS13DQ5THJ4 4388 aa6.97□□□□□ -1.29
ERCC2-204ENST00000391945 A0A0D9SG42 100 aa6.97□□□□□ -1.29
ERCC2-204ENST00000391945 KRTAP16-1A8MUX0 517 aa6.96□□□□□ -1.3
ERCC2-204ENST00000391945 A0A1B0GU33 70 aa6.95□□□□□ -1.3
ERCC2-204ENST00000391945 LYSTQ99698 3801 aa6.95□□□□□ -1.3
ERCC2-204ENST00000391945 A8MUU9 505 aa6.95□□□□□ -1.3
ERCC2-204ENST00000391945 C20orf166-AS1Q96NR2 134 aa6.94□□□□□ -1.3
ERCC2-204ENST00000391945 KMT2AQ03164 3969 aa6.93□□□□□ -1.3
ERCC2-204ENST00000391945 SEC61BP60468 96 aaKnown RBP6.93□□□□□ -1.3
ERCC2-204ENST00000391945 RPL37P61927 97 aaKnown RBP6.91□□□□□ -1.3
ERCC2-204ENST00000391945 S4R3F8 94 aa6.9□□□□□ -1.3
ERCC2-204ENST00000391945 KRTAP10-8P60410 259 aa6.89□□□□□ -1.31
ERCC2-204ENST00000391945 DNAH5Q8TE73 4624 aa6.88□□□□□ -1.31
ERCC2-204ENST00000391945 XP32Q5T750 250 aa6.86□□□□□ -1.31
ERCC2-204ENST00000391945 CRIPTQ9P021 101 aa6.86□□□□□ -1.31
ERCC2-204ENST00000391945 KRTAP13-3Q3SY46 172 aa6.85□□□□□ -1.31
ERCC2-204ENST00000391945 SPATA8Q6RVD6 105 aa6.82□□□□□ -1.32
ERCC2-204ENST00000391945 DNAH7Q8WXX0 4024 aa6.81□□□□□ -1.32
ERCC2-204ENST00000391945 DNAH17Q9UFH2 4485 aa6.8□□□□□ -1.32
ERCC2-204ENST00000391945 FAT1Q14517 4588 aa6.79□□□□□ -1.32
ERCC2-204ENST00000391945 KRTAP10-4P60372 401 aaPredicted RBP6.78□□□□□ -1.32
ERCC2-204ENST00000391945 ALMS1Q8TCU4 4167 aa6.77□□□□□ -1.33
ERCC2-204ENST00000391945 LRP1BQ9NZR2 4599 aa6.76□□□□□ -1.33
ERCC2-204ENST00000391945 M0R2T5 61 aa6.75□□□□□ -1.33
ERCC2-204ENST00000391945 H1FX-AS1Q4G0G2 97 aa6.75□□□□□ -1.33
ERCC2-204ENST00000391945 DNAH2Q9P225 4427 aa6.75□□□□□ -1.33
ERCC2-204ENST00000391945 ROMO1P60602 79 aa6.73□□□□□ -1.33
ERCC2-204ENST00000391945 DYNC1H1Q14204 4646 aaKnown RBP6.73□□□□□ -1.33
ERCC2-204ENST00000391945 DYNC2H1Q8NCM8 4307 aaKnown RBP6.71□□□□□ -1.34
ERCC2-204ENST00000391945 LUZP6Q538Z0 58 aa6.71□□□□□ -1.34
ERCC2-204ENST00000391945 NDUFAF8A1L188 74 aa6.7□□□□□ -1.34
ERCC2-204ENST00000391945 TPRXLQ17RH7 258 aa6.69□□□□□ -1.34
ERCC2-204ENST00000391945 KRTAP4-5Q9BYR2 181 aa6.67□□□□□ -1.34
ERCC2-204ENST00000391945 DNAH8Q96JB1 4490 aa6.65□□□□□ -1.34
ERCC2-204ENST00000391945 R4GN34 69 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms