RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 HMGA1P17096 107 aaKnown RBP-1.57□□□□□ -2.66
SNORD28B-201ENST00000390993 PARP4Q9UKK3 1724 aaKnown RBP-1.57□□□□□ -2.66
SNORD28B-201ENST00000390993 CEBPZOSA8MTT3 80 aa-1.58□□□□□ -2.66
SNORD28B-201ENST00000390993 H3BUA1 57 aa-1.58□□□□□ -2.66
SNORD28B-201ENST00000390993 MT2AP02795 61 aa-1.58□□□□□ -2.66
SNORD28B-201ENST00000390993 URB2Q14146 1524 aaKnown RBP-1.58□□□□□ -2.66
SNORD28B-201ENST00000390993 NEXMIFQ5QGS0 1516 aa-1.58□□□□□ -2.66
SNORD28B-201ENST00000390993 KIAA0586Q9BVV6 1533 aa-1.58□□□□□ -2.66
SNORD28B-201ENST00000390993 NCOA2Q15596 1464 aa-1.58□□□□□ -2.66
SNORD28B-201ENST00000390993 DIP2BQ9P265 1576 aa-1.59□□□□□ -2.66
SNORD28B-201ENST00000390993 ABCA13Q86UQ4 5058 aa-1.59□□□□□ -2.66
SNORD28B-201ENST00000390993 CDC42BPGQ6DT37 1551 aa-1.59□□□□□ -2.66
SNORD28B-201ENST00000390993 ITPR2Q14571 2701 aa-1.6□□□□□ -2.66
SNORD28B-201ENST00000390993 RABAC1Q9UI14 185 aa-1.6□□□□□ -2.67
SNORD28B-201ENST00000390993 MYO3AQ8NEV4 1616 aa-1.6□□□□□ -2.67
SNORD28B-201ENST00000390993 LINC00587B1AMM8 73 aa-1.61□□□□□ -2.67
SNORD28B-201ENST00000390993 RBP2P50120 134 aa-1.61□□□□□ -2.67
SNORD28B-201ENST00000390993 ITSN1Q15811 1721 aa-1.61□□□□□ -2.67
SNORD28B-201ENST00000390993 LINC01546A6NGU7 62 aa-1.62□□□□□ -2.67
SNORD28B-201ENST00000390993 MT1BP07438 61 aa-1.62□□□□□ -2.67
SNORD28B-201ENST00000390993 SNRPFP62306 86 aaKnown RBP-1.62□□□□□ -2.67
SNORD28B-201ENST00000390993 C20orf78Q9BR46 151 aa-1.62□□□□□ -2.67
SNORD28B-201ENST00000390993 TCEAL7Q9BRU2 100 aa-1.62□□□□□ -2.67
SNORD28B-201ENST00000390993 TLN1Q9Y490 2541 aaKnown RBP-1.62□□□□□ -2.67
SNORD28B-201ENST00000390993 ARFGEF2Q9Y6D5 1785 aa-1.62□□□□□ -2.67
SNORD28B-201ENST00000390993 LY75O60449 1722 aa-1.63□□□□□ -2.67
SNORD28B-201ENST00000390993 NCMAPQ5T1S8 102 aa-1.63□□□□□ -2.67
SNORD28B-201ENST00000390993 MINOS1Q5TGZ0 78 aa-1.63□□□□□ -2.67
SNORD28B-201ENST00000390993 LINC00643Q86TS7 51 aa-1.63□□□□□ -2.67
SNORD28B-201ENST00000390993 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-1.63□□□□□ -2.67
SNORD28B-201ENST00000390993 PVALEFA0A1B0GWK0 134 aa-1.64□□□□□ -2.67
SNORD28B-201ENST00000390993 UBL5Q9BZL1 73 aa-1.64□□□□□ -2.67
SNORD28B-201ENST00000390993 KIF1AQ12756 1690 aa-1.64□□□□□ -2.67
SNORD28B-201ENST00000390993 ZC3H13Q5T200 1668 aaKnown RBP-1.64□□□□□ -2.67
SNORD28B-201ENST00000390993 ITSN2Q9NZM3 1697 aa-1.64□□□□□ -2.67
SNORD28B-201ENST00000390993 HFM1A2PYH4 1435 aa-1.65□□□□□ -2.67
SNORD28B-201ENST00000390993 CNTLNQ9NXG0 1405 aa-1.65□□□□□ -2.67
SNORD28B-201ENST00000390993 RPS27P42677 84 aaKnown RBP-1.65□□□□□ -2.67
SNORD28B-201ENST00000390993 NREPQ16612 68 aa-1.65□□□□□ -2.67
SNORD28B-201ENST00000390993 RPS27LQ71UM5 84 aaKnown RBP-1.65□□□□□ -2.67
SNORD28B-201ENST00000390993 ATMQ13315 3056 aa-1.65□□□□□ -2.67
SNORD28B-201ENST00000390993 CSMD2Q7Z408 3487 aa-1.65□□□□□ -2.67
SNORD28B-201ENST00000390993 CEP162Q5TB80 1403 aa-1.66□□□□□ -2.67
SNORD28B-201ENST00000390993 PLCH1Q4KWH8 1693 aa-1.67□□□□□ -2.68
SNORD28B-201ENST00000390993 MAST1Q9Y2H9 1570 aa-1.67□□□□□ -2.68
SNORD28B-201ENST00000390993 M0QY20 66 aa-1.67□□□□□ -2.68
SNORD28B-201ENST00000390993 M0QZ58 72 aa-1.67□□□□□ -2.68
SNORD28B-201ENST00000390993 ATP5EP2Q5VTU8 51 aa-1.67□□□□□ -2.68
SNORD28B-201ENST00000390993 TMEM131LA2VDJ0 1609 aa-1.67□□□□□ -2.68
SNORD28B-201ENST00000390993 UBR1Q8IWV7 1749 aa-1.68□□□□□ -2.68
SNORD28B-201ENST00000390993 ATP6V1G2-DDX39BF2Z307 99 aa-1.68□□□□□ -2.68
SNORD28B-201ENST00000390993 C14orf144Q96I85 54 aa-1.68□□□□□ -2.68
SNORD28B-201ENST00000390993 A0A087WXM4 84 aa-1.69□□□□□ -2.68
SNORD28B-201ENST00000390993 M0R143 59 aa-1.69□□□□□ -2.68
SNORD28B-201ENST00000390993 SPART-AS1P0CW21 52 aa-1.69□□□□□ -2.68
SNORD28B-201ENST00000390993 FCER1GP30273 86 aa-1.69□□□□□ -2.68
SNORD28B-201ENST00000390993 PYY3Q5JQD4 70 aa-1.69□□□□□ -2.68
SNORD28B-201ENST00000390993 KCNQ1DNQ9H478 68 aa-1.69□□□□□ -2.68
SNORD28B-201ENST00000390993 C6orf48Q9UBA6 75 aa-1.69□□□□□ -2.68
SNORD28B-201ENST00000390993 FREM2Q5SZK8 3169 aa-1.69□□□□□ -2.68
SNORD28B-201ENST00000390993 ARHGAP35Q9NRY4 1499 aa-1.69□□□□□ -2.68
SNORD28B-201ENST00000390993 PIK3C2BO00750 1634 aa-1.69□□□□□ -2.68
SNORD28B-201ENST00000390993 CRIP1P50238 77 aa-1.7□□□□□ -2.68
SNORD28B-201ENST00000390993 RALGAPBQ86X10 1494 aa-1.7□□□□□ -2.68
SNORD28B-201ENST00000390993 NRAPQ86VF7 1730 aa-1.71□□□□□ -2.68
SNORD28B-201ENST00000390993 LRRIQ1Q96JM4 1722 aa-1.71□□□□□ -2.68
SNORD28B-201ENST00000390993 KANTRA0A1W2PQU2 76 aa-1.71□□□□□ -2.68
SNORD28B-201ENST00000390993 S100A16Q96FQ6 103 aaKnown RBP-1.71□□□□□ -2.68
SNORD28B-201ENST00000390993 A8MTW9 85 aa-1.72□□□□□ -2.68
SNORD28B-201ENST00000390993 DEFB4AO15263 64 aa-1.72□□□□□ -2.68
SNORD28B-201ENST00000390993 BOD1L1Q8NFC6 3051 aa-1.72□□□□□ -2.68
SNORD28B-201ENST00000390993 INO80Q9ULG1 1556 aaPredicted RBP-1.72□□□□□ -2.69
SNORD28B-201ENST00000390993 SFTA3P0C7M3 94 aa-1.73□□□□□ -2.69
SNORD28B-201ENST00000390993 KRTAP20-1Q3LI63 56 aa-1.73□□□□□ -2.69
SNORD28B-201ENST00000390993 RICTORQ6R327 1708 aa-1.74□□□□□ -2.69
SNORD28B-201ENST00000390993 ETDCA0A1B0GVM5 59 aa-1.74□□□□□ -2.69
SNORD28B-201ENST00000390993 CFAP43Q8NDM7 1665 aa-1.74□□□□□ -2.69
SNORD28B-201ENST00000390993 TJP1Q07157 1748 aa-1.74□□□□□ -2.69
SNORD28B-201ENST00000390993 PPLO60437 1756 aa-1.75□□□□□ -2.69
SNORD28B-201ENST00000390993 CD163L1Q9NR16 1453 aa-1.75□□□□□ -2.69
SNORD28B-201ENST00000390993 PRUNE2Q8WUY3 3088 aa-1.76□□□□□ -2.69
SNORD28B-201ENST00000390993 ANKRD26Q9UPS8 1709 aa-1.76□□□□□ -2.69
SNORD28B-201ENST00000390993 Q9H521 79 aa-1.76□□□□□ -2.69
SNORD28B-201ENST00000390993 RNF17Q9BXT8 1623 aaKnown RBP-1.77□□□□□ -2.69
SNORD28B-201ENST00000390993 A0A1B0GUL6 1792 aa-1.77□□□□□ -2.69
SNORD28B-201ENST00000390993 SMIM13P0DJ93 91 aa-1.77□□□□□ -2.69
SNORD28B-201ENST00000390993 SMARCA2P51531 1590 aa-1.77□□□□□ -2.69
SNORD28B-201ENST00000390993 MAP3K4Q9Y6R4 1608 aa-1.77□□□□□ -2.69
SNORD28B-201ENST00000390993 CFAP54Q96N23 3096 aa-1.78□□□□□ -2.69
SNORD28B-201ENST00000390993 PKIAP61925 76 aa-1.78□□□□□ -2.69
SNORD28B-201ENST00000390993 NCBP2-AS2Q69YL0 99 aa-1.78□□□□□ -2.69
SNORD28B-201ENST00000390993 SNHG12Q9BXW3 62 aa-1.78□□□□□ -2.69
SNORD28B-201ENST00000390993 ERVK-7P63135 1459 aa-1.78□□□□□ -2.69
SNORD28B-201ENST00000390993 KDM5DQ9BY66 1539 aa-1.78□□□□□ -2.69
SNORD28B-201ENST00000390993 KIF14Q15058 1648 aa-1.78□□□□□ -2.69
SNORD28B-201ENST00000390993 AKAP12Q02952 1782 aa-1.8□□□□□ -2.7
SNORD28B-201ENST00000390993 S100A8P05109 93 aa-1.8□□□□□ -2.7
SNORD28B-201ENST00000390993 ABCC3O15438 1527 aa-1.81□□□□□ -2.7
SNORD28B-201ENST00000390993 DEFB121Q5J5C9 76 aa-1.81□□□□□ -2.7
SNORD28B-201ENST00000390993 ENHOQ6UWT2 76 aa-1.81□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms