RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 IGLV5-37A0A075B6J1 123 aa11.59□□□□□ -0.55
PPFIA1-202ENST00000389547 MMP24-AS1A0A0U1RRL7 71 aa11.59□□□□□ -0.55
PPFIA1-202ENST00000389547 A0A1B0GVX0 72 aa11.58□□□□□ -0.55
PPFIA1-202ENST00000389547 PANO1I0J062 215 aa11.58□□□□□ -0.56
PPFIA1-202ENST00000389547 KRTAP29-1A8MX34 341 aaPredicted RBP11.55□□□□□ -0.56
PPFIA1-202ENST00000389547 ZNF861PO60384 105 aa11.54□□□□□ -0.56
PPFIA1-202ENST00000389547 LINC00472Q9H8W2 130 aa11.51□□□□□ -0.57
PPFIA1-202ENST00000389547 SPACA4Q8TDM5 124 aa11.51□□□□□ -0.57
PPFIA1-202ENST00000389547 KRTAP4-16G5E9R7 235 aaPredicted RBP11.49□□□□□ -0.57
PPFIA1-202ENST00000389547 ADM2Q7Z4H4 148 aa11.49□□□□□ -0.57
PPFIA1-202ENST00000389547 KRTAP10-2P60368 255 aa11.49□□□□□ -0.57
PPFIA1-202ENST00000389547 CSAG1Q6PB30 78 aa11.48□□□□□ -0.57
PPFIA1-202ENST00000389547 Q6ZR54 194 aa11.47□□□□□ -0.57
PPFIA1-202ENST00000389547 IGLV7-43P04211 117 aa11.45□□□□□ -0.58
PPFIA1-202ENST00000389547 Q6ZRN7 208 aaPredicted RBP11.44□□□□□ -0.58
PPFIA1-202ENST00000389547 PLA2G1BP04054 148 aaKnown RBP11.44□□□□□ -0.58
PPFIA1-202ENST00000389547 KRTAP7-1Q8IUC3 87 aa11.42□□□□□ -0.58
PPFIA1-202ENST00000389547 DMBT1Q9UGM3 2413 aaPredicted RBP11.4□□□□□ -0.58
PPFIA1-202ENST00000389547 FBN3Q75N90 2809 aa11.4□□□□□ -0.58
PPFIA1-202ENST00000389547 FAM229AH3BQW9 127 aa11.39□□□□□ -0.59
PPFIA1-202ENST00000389547 KRTAP11-1Q8IUC1 163 aa11.38□□□□□ -0.59
PPFIA1-202ENST00000389547 TYMSOSQ8TAI1 123 aa11.38□□□□□ -0.59
PPFIA1-202ENST00000389547 PLAC8Q9NZF1 115 aa11.36□□□□□ -0.59
PPFIA1-202ENST00000389547 KRTAP10-1P60331 282 aa11.35□□□□□ -0.59
PPFIA1-202ENST00000389547 SSBP3-AS1Q7Z2R9 100 aa11.34□□□□□ -0.59
PPFIA1-202ENST00000389547 FLG2Q5D862 2391 aaPredicted RBP11.33□□□□□ -0.6
PPFIA1-202ENST00000389547 KRTAP21-3Q3LHN1 58 aa11.33□□□□□ -0.6
PPFIA1-202ENST00000389547 SPINT4Q6UDR6 99 aa11.27□□□□□ -0.61
PPFIA1-202ENST00000389547 SPRR1BP22528 89 aa11.22□□□□□ -0.61
PPFIA1-202ENST00000389547 COL7A1Q02388 2944 aa11.2□□□□□ -0.62
PPFIA1-202ENST00000389547 MEGF8Q7Z7M0 2845 aa11.19□□□□□ -0.62
PPFIA1-202ENST00000389547 Q8N1X5 172 aa11.17□□□□□ -0.62
PPFIA1-202ENST00000389547 A0A087X002 238 aa11.17□□□□□ -0.62
PPFIA1-202ENST00000389547 NOTCH2NLQ7Z3S9 236 aa11.17□□□□□ -0.62
PPFIA1-202ENST00000389547 CRIPTQ9P021 101 aa11.15□□□□□ -0.63
PPFIA1-202ENST00000389547 SRRM2Q9UQ35 2752 aaKnown RBP11.14□□□□□ -0.63
PPFIA1-202ENST00000389547 Q5W150 140 aa11.13□□□□□ -0.63
PPFIA1-202ENST00000389547 SPATA8Q6RVD6 105 aa11.11□□□□□ -0.63
PPFIA1-202ENST00000389547 LINC00304Q8N9R0 145 aa11.11□□□□□ -0.63
PPFIA1-202ENST00000389547 Q96NJ1 140 aa11.11□□□□□ -0.63
PPFIA1-202ENST00000389547 DMAC1Q96GE9 116 aa11.08□□□□□ -0.64
PPFIA1-202ENST00000389547 ASB16-AS1Q495Z4 193 aa11.07□□□□□ -0.64
PPFIA1-202ENST00000389547 CSMD3Q7Z407 3707 aa11.04□□□□□ -0.64
PPFIA1-202ENST00000389547 C9orf92A6NGG3 77 aa11□□□□□ -0.65
PPFIA1-202ENST00000389547 HUWE1Q7Z6Z7 4374 aaKnown RBP10.98□□□□□ -0.65
PPFIA1-202ENST00000389547 A0A1B0GU33 70 aa10.95□□□□□ -0.66
PPFIA1-202ENST00000389547 KRTAP13-1Q8IUC0 172 aa10.94□□□□□ -0.66
PPFIA1-202ENST00000389547 LINC00483Q53H64 154 aa10.9□□□□□ -0.66
PPFIA1-202ENST00000389547 A0A0D9SG42 100 aa10.86□□□□□ -0.67
PPFIA1-202ENST00000389547 Q5VSD8 79 aa10.83□□□□□ -0.68
PPFIA1-202ENST00000389547 DNHD1Q96M86 4753 aa10.83□□□□□ -0.68
PPFIA1-202ENST00000389547 KRTAP25-1Q3LHN0 102 aa10.81□□□□□ -0.68
PPFIA1-202ENST00000389547 J3QL48 77 aa10.79□□□□□ -0.68
PPFIA1-202ENST00000389547 DNAH9Q9NYC9 4486 aa10.78□□□□□ -0.68
PPFIA1-202ENST00000389547 ROMO1P60602 79 aa10.77□□□□□ -0.68
PPFIA1-202ENST00000389547 KRTAP13-2Q52LG2 175 aa10.76□□□□□ -0.69
PPFIA1-202ENST00000389547 Q6ZSA8 131 aa10.76□□□□□ -0.69
PPFIA1-202ENST00000389547 ANK2Q01484 3957 aa10.69□□□□□ -0.7
PPFIA1-202ENST00000389547 PRKDCP78527 4128 aaKnown RBP10.61□□□□□ -0.71
PPFIA1-202ENST00000389547 H1FX-AS1Q4G0G2 97 aa10.6□□□□□ -0.71
PPFIA1-202ENST00000389547 PLECQ15149 4684 aaKnown RBP10.6□□□□□ -0.71
PPFIA1-202ENST00000389547 A8MUU9 505 aa10.59□□□□□ -0.71
PPFIA1-202ENST00000389547 KRTAP1-4P0C5Y4 121 aa10.55□□□□□ -0.72
PPFIA1-202ENST00000389547 NDUFAF8A1L188 74 aa10.52□□□□□ -0.73
PPFIA1-202ENST00000389547 DNAH10Q8IVF4 4471 aa10.47□□□□□ -0.73
PPFIA1-202ENST00000389547 RPL37P61927 97 aaKnown RBP10.47□□□□□ -0.73
PPFIA1-202ENST00000389547 STARD9Q9P2P6 4700 aa10.43□□□□□ -0.74
PPFIA1-202ENST00000389547 A0A1B0GVY2 172 aa10.42□□□□□ -0.74
PPFIA1-202ENST00000389547 H0YAA0 97 aa10.42□□□□□ -0.74
PPFIA1-202ENST00000389547 KRTAP16-1A8MUX0 517 aa10.38□□□□□ -0.75
PPFIA1-202ENST00000389547 KRTAP13-3Q3SY46 172 aa10.38□□□□□ -0.75
PPFIA1-202ENST00000389547 CMYA5Q8N3K9 4069 aa10.36□□□□□ -0.75
PPFIA1-202ENST00000389547 DNAH1Q9P2D7 4330 aa10.29□□□□□ -0.76
PPFIA1-202ENST00000389547 COX6B2Q6YFQ2 88 aa10.28□□□□□ -0.76
PPFIA1-202ENST00000389547 LYSTQ99698 3801 aa10.26□□□□□ -0.77
PPFIA1-202ENST00000389547 DNAH3Q8TD57 4116 aa10.25□□□□□ -0.77
PPFIA1-202ENST00000389547 DNAH11Q96DT5 4516 aa10.24□□□□□ -0.77
PPFIA1-202ENST00000389547 RPS29P62273 56 aaKnown RBP10.22□□□□□ -0.77
PPFIA1-202ENST00000389547 C10orf95Q9H7T3 257 aa10.22□□□□□ -0.77
PPFIA1-202ENST00000389547 KMT2AQ03164 3969 aa10.21□□□□□ -0.77
PPFIA1-202ENST00000389547 C20orf166-AS1Q96NR2 134 aa10.2□□□□□ -0.78
PPFIA1-202ENST00000389547 VPS13DQ5THJ4 4388 aa10.19□□□□□ -0.78
PPFIA1-202ENST00000389547 LUZP6Q538Z0 58 aa10.16□□□□□ -0.78
PPFIA1-202ENST00000389547 A0A0A0MQY5 61 aa10.11□□□□□ -0.79
PPFIA1-202ENST00000389547 DNAH5Q8TE73 4624 aa10.08□□□□□ -0.8
PPFIA1-202ENST00000389547 S4R3F8 94 aa10.06□□□□□ -0.8
PPFIA1-202ENST00000389547 P0C880 135 aa10.05□□□□□ -0.8
PPFIA1-202ENST00000389547 DNAH7Q8WXX0 4024 aa10.04□□□□□ -0.8
PPFIA1-202ENST00000389547 FAT1Q14517 4588 aa9.98□□□□□ -0.81
PPFIA1-202ENST00000389547 KRTAP10-8P60410 259 aa9.97□□□□□ -0.81
PPFIA1-202ENST00000389547 SEC61BP60468 96 aaKnown RBP9.95□□□□□ -0.82
PPFIA1-202ENST00000389547 DNAH17Q9UFH2 4485 aa9.92□□□□□ -0.82
PPFIA1-202ENST00000389547 LRP1BQ9NZR2 4599 aa9.9□□□□□ -0.82
PPFIA1-202ENST00000389547 XP32Q5T750 250 aa9.89□□□□□ -0.83
PPFIA1-202ENST00000389547 DNAH2Q9P225 4427 aa9.88□□□□□ -0.83
PPFIA1-202ENST00000389547 DYNC1H1Q14204 4646 aaKnown RBP9.86□□□□□ -0.83
PPFIA1-202ENST00000389547 ALMS1Q8TCU4 4167 aa9.85□□□□□ -0.83
PPFIA1-202ENST00000389547 KRTAP10-4P60372 401 aaPredicted RBP9.85□□□□□ -0.83
PPFIA1-202ENST00000389547 TPRXLQ17RH7 258 aa9.84□□□□□ -0.83
PPFIA1-202ENST00000389547 DYNC2H1Q8NCM8 4307 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms