RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 Q6ZR54 194 aa6.65□□□□□ -1.35
NEDD9-201ENST00000379433 SMIM29Q86T20 159 aa6.65□□□□□ -1.35
NEDD9-201ENST00000379433 IGFL1Q6UW32 110 aa6.65□□□□□ -1.35
NEDD9-201ENST00000379433 SPACA4Q8TDM5 124 aa6.64□□□□□ -1.35
NEDD9-201ENST00000379433 PSORS1C2Q9UIG4 136 aa6.64□□□□□ -1.35
NEDD9-201ENST00000379433 IGLV5-48A0A075B6I7 105 aa6.63□□□□□ -1.35
NEDD9-201ENST00000379433 RPL37AP61513 92 aaKnown RBP6.63□□□□□ -1.35
NEDD9-201ENST00000379433 HECTD4Q9Y4D8 3996 aa6.63□□□□□ -1.35
NEDD9-201ENST00000379433 SPAG11AQ6PDA7 123 aa6.62□□□□□ -1.35
NEDD9-201ENST00000379433 DYNC2H1Q8NCM8 4307 aaKnown RBP6.62□□□□□ -1.35
NEDD9-201ENST00000379433 Q8NBF4 154 aa6.62□□□□□ -1.35
NEDD9-201ENST00000379433 LINC00208Q96KT6 92 aa6.61□□□□□ -1.35
NEDD9-201ENST00000379433 C8orf17Q9NRJ1 99 aa6.6□□□□□ -1.35
NEDD9-201ENST00000379433 DNAH11Q96DT5 4516 aa6.6□□□□□ -1.35
NEDD9-201ENST00000379433 ASB16-AS1Q495Z4 193 aa6.59□□□□□ -1.35
NEDD9-201ENST00000379433 A8MWP4 228 aa6.58□□□□□ -1.36
NEDD9-201ENST00000379433 FAM229AH3BQW9 127 aa6.58□□□□□ -1.36
NEDD9-201ENST00000379433 WFDC13Q8IUB5 93 aa6.58□□□□□ -1.36
NEDD9-201ENST00000379433 OCR1Q9BZK8 76 aa6.58□□□□□ -1.36
NEDD9-201ENST00000379433 K7EQZ3 153 aa6.58□□□□□ -1.36
NEDD9-201ENST00000379433 SPINK7P58062 85 aa6.58□□□□□ -1.36
NEDD9-201ENST00000379433 CIRBP-AS1Q8TBR5 109 aa6.57□□□□□ -1.36
NEDD9-201ENST00000379433 IGKV4-1P06312 121 aa6.55□□□□□ -1.36
NEDD9-201ENST00000379433 SPINK6Q6UWN8 80 aa6.54□□□□□ -1.36
NEDD9-201ENST00000379433 DNAH17Q9UFH2 4485 aa6.54□□□□□ -1.36
NEDD9-201ENST00000379433 KRTAP10-1P60331 282 aa6.53□□□□□ -1.36
NEDD9-201ENST00000379433 K7ERS5 55 aa6.52□□□□□ -1.37
NEDD9-201ENST00000379433 NDUFB1O75438 58 aa6.52□□□□□ -1.37
NEDD9-201ENST00000379433 SMR3BP02814 79 aaPredicted RBP6.51□□□□□ -1.37
NEDD9-201ENST00000379433 DSCR10P59022 87 aa6.51□□□□□ -1.37
NEDD9-201ENST00000379433 P0C880 135 aa6.51□□□□□ -1.37
NEDD9-201ENST00000379433 SPRR4Q96PI1 79 aa6.51□□□□□ -1.37
NEDD9-201ENST00000379433 PKHD1P08F94 4074 aa6.51□□□□□ -1.37
NEDD9-201ENST00000379433 NDUFAF8A1L188 74 aa6.51□□□□□ -1.37
NEDD9-201ENST00000379433 ZNF861PO60384 105 aa6.5□□□□□ -1.37
NEDD9-201ENST00000379433 PLAC8Q9NZF1 115 aa6.5□□□□□ -1.37
NEDD9-201ENST00000379433 DNAH8Q96JB1 4490 aa6.5□□□□□ -1.37
NEDD9-201ENST00000379433 A0A1B0GW54 56 aa6.48□□□□□ -1.37
NEDD9-201ENST00000379433 KRTAP13-1Q8IUC0 172 aa6.48□□□□□ -1.37
NEDD9-201ENST00000379433 IGLV7-43P04211 117 aa6.47□□□□□ -1.37
NEDD9-201ENST00000379433 DNAH5Q8TE73 4624 aa6.47□□□□□ -1.37
NEDD9-201ENST00000379433 LRP1BQ9NZR2 4599 aa6.46□□□□□ -1.38
NEDD9-201ENST00000379433 A0A087X002 238 aa6.43□□□□□ -1.38
NEDD9-201ENST00000379433 C20orf166-AS1Q96NR2 134 aa6.43□□□□□ -1.38
NEDD9-201ENST00000379433 KMT2CQ8NEZ4 4911 aaKnown RBP6.42□□□□□ -1.38
NEDD9-201ENST00000379433 SPRR1BP22528 89 aa6.42□□□□□ -1.38
NEDD9-201ENST00000379433 LINC01558Q9Y6Z2 57 aa6.42□□□□□ -1.38
NEDD9-201ENST00000379433 FLG2Q5D862 2391 aaPredicted RBP6.42□□□□□ -1.38
NEDD9-201ENST00000379433 IGLV8-61A0A075B6I0 122 aa6.41□□□□□ -1.38
NEDD9-201ENST00000379433 ZCCHC13Q8WW36 166 aaKnown RBP6.4□□□□□ -1.38
NEDD9-201ENST00000379433 FAT2Q9NYQ8 4349 aa6.4□□□□□ -1.39
NEDD9-201ENST00000379433 COA5Q86WW8 74 aa6.4□□□□□ -1.39
NEDD9-201ENST00000379433 VPS13BQ7Z7G8 4022 aa6.4□□□□□ -1.39
NEDD9-201ENST00000379433 H0Y9P7 68 aa6.38□□□□□ -1.39
NEDD9-201ENST00000379433 LINC00472Q9H8W2 130 aa6.38□□□□□ -1.39
NEDD9-201ENST00000379433 SACSQ9NZJ4 4579 aa6.37□□□□□ -1.39
NEDD9-201ENST00000379433 LINC00483Q53H64 154 aa6.37□□□□□ -1.39
NEDD9-201ENST00000379433 FAT1Q14517 4588 aa6.36□□□□□ -1.39
NEDD9-201ENST00000379433 ALMS1Q8TCU4 4167 aa6.35□□□□□ -1.39
NEDD9-201ENST00000379433 DMBT1Q9UGM3 2413 aaPredicted RBP6.35□□□□□ -1.39
NEDD9-201ENST00000379433 PKD1P98161 4303 aa6.35□□□□□ -1.39
NEDD9-201ENST00000379433 LCE6AA0A183 80 aa6.32□□□□□ -1.4
NEDD9-201ENST00000379433 KRTAP25-1Q3LHN0 102 aa6.31□□□□□ -1.4
NEDD9-201ENST00000379433 SPANXA2-OT1Q8N9U9 137 aa6.31□□□□□ -1.4
NEDD9-201ENST00000379433 KRTAP13-2Q52LG2 175 aa6.3□□□□□ -1.4
NEDD9-201ENST00000379433 SPINT4Q6UDR6 99 aa6.3□□□□□ -1.4
NEDD9-201ENST00000379433 Q96NJ1 140 aa6.3□□□□□ -1.4
NEDD9-201ENST00000379433 Q6ZSA8 131 aa6.3□□□□□ -1.4
NEDD9-201ENST00000379433 PCOTHQ58A44 107 aa6.29□□□□□ -1.4
NEDD9-201ENST00000379433 MMP24-AS1A0A0U1RRL7 71 aa6.28□□□□□ -1.4
NEDD9-201ENST00000379433 TYMSOSQ8TAI1 123 aa6.27□□□□□ -1.41
NEDD9-201ENST00000379433 DYNC1H1Q14204 4646 aaKnown RBP6.26□□□□□ -1.41
NEDD9-201ENST00000379433 A0A1B0GVX0 72 aa6.25□□□□□ -1.41
NEDD9-201ENST00000379433 KRTAP29-1A8MX34 341 aaPredicted RBP6.25□□□□□ -1.41
NEDD9-201ENST00000379433 A8MUU9 505 aa6.24□□□□□ -1.41
NEDD9-201ENST00000379433 KRTAP1-4P0C5Y4 121 aa6.22□□□□□ -1.41
NEDD9-201ENST00000379433 SSBP3-AS1Q7Z2R9 100 aa6.22□□□□□ -1.41
NEDD9-201ENST00000379433 H3BPC8 53 aa6.2□□□□□ -1.42
NEDD9-201ENST00000379433 MRPL34Q9BQ48 92 aaKnown RBP6.19□□□□□ -1.42
NEDD9-201ENST00000379433 RYR2Q92736 4967 aa6.19□□□□□ -1.42
NEDD9-201ENST00000379433 RYR3Q15413 4870 aa6.17□□□□□ -1.42
NEDD9-201ENST00000379433 APOBP04114 4563 aaKnown RBP6.16□□□□□ -1.42
NEDD9-201ENST00000379433 A0A1B0GU69 56 aa6.16□□□□□ -1.42
NEDD9-201ENST00000379433 C9orf92A6NGG3 77 aa6.16□□□□□ -1.42
NEDD9-201ENST00000379433 SPATA8Q6RVD6 105 aa6.16□□□□□ -1.42
NEDD9-201ENST00000379433 UQCR11O14957 56 aa6.15□□□□□ -1.42
NEDD9-201ENST00000379433 Q5W150 140 aa6.15□□□□□ -1.42
NEDD9-201ENST00000379433 A0A1B0GVY2 172 aa6.14□□□□□ -1.43
NEDD9-201ENST00000379433 LINC00304Q8N9R0 145 aa6.14□□□□□ -1.43
NEDD9-201ENST00000379433 DMAC1Q96GE9 116 aa6.14□□□□□ -1.43
NEDD9-201ENST00000379433 LRP1Q07954 4544 aaKnown RBP6.14□□□□□ -1.43
NEDD9-201ENST00000379433 KIAA1109Q2LD37 5005 aa6.11□□□□□ -1.43
NEDD9-201ENST00000379433 IGKV2D-30A0A075B6S6 120 aa6.1□□□□□ -1.43
NEDD9-201ENST00000379433 IGKV2-30P06310 120 aa6.1□□□□□ -1.43
NEDD9-201ENST00000379433 IGLV7-46A0A075B6I9 117 aa6.1□□□□□ -1.43
NEDD9-201ENST00000379433 CRIPTQ9P021 101 aa6.09□□□□□ -1.43
NEDD9-201ENST00000379433 TP53AIP1Q9HCN2 124 aa6.08□□□□□ -1.44
NEDD9-201ENST00000379433 SPINK1P00995 79 aa6.07□□□□□ -1.44
NEDD9-201ENST00000379433 MYCBP2O75592 4640 aa6.07□□□□□ -1.44
NEDD9-201ENST00000379433 Q5VSD8 79 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 164.5 ms