RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 CAMK2N1Q7Z7J9 78 aa4.12□□□□□ -1.75
CHD6-203ENST00000373233 IGLV5-37A0A075B6J1 123 aa4.11□□□□□ -1.75
CHD6-203ENST00000373233 MMP24-AS1A0A0U1RRL7 71 aa4.11□□□□□ -1.75
CHD6-203ENST00000373233 A8MU10 97 aa4.11□□□□□ -1.75
CHD6-203ENST00000373233 TGP01266 2768 aa4.09□□□□□ -1.75
CHD6-203ENST00000373233 CELSR1Q9NYQ6 3014 aa4.09□□□□□ -1.76
CHD6-203ENST00000373233 SPATA8Q6RVD6 105 aa4.08□□□□□ -1.76
CHD6-203ENST00000373233 ZCCHC13Q8WW36 166 aaKnown RBP4.08□□□□□ -1.76
CHD6-203ENST00000373233 A0A087WTM6 91 aa4.07□□□□□ -1.76
CHD6-203ENST00000373233 COX6B2Q6YFQ2 88 aa4.07□□□□□ -1.76
CHD6-203ENST00000373233 SRRM2Q9UQ35 2752 aaKnown RBP4.07□□□□□ -1.76
CHD6-203ENST00000373233 Q6ZR54 194 aa4.06□□□□□ -1.76
CHD6-203ENST00000373233 PKD1L1Q8TDX9 2849 aa4.06□□□□□ -1.76
CHD6-203ENST00000373233 Q5W150 140 aa4.05□□□□□ -1.76
CHD6-203ENST00000373233 VPS13CQ709C8 3753 aa4.04□□□□□ -1.76
CHD6-203ENST00000373233 C9orf92A6NGG3 77 aa4.04□□□□□ -1.76
CHD6-203ENST00000373233 KRTAP26-1Q6PEX3 210 aa4.04□□□□□ -1.76
CHD6-203ENST00000373233 KRTAP1-5Q9BYS1 174 aa4.04□□□□□ -1.76
CHD6-203ENST00000373233 J3QL48 77 aa4.03□□□□□ -1.76
CHD6-203ENST00000373233 A0A087X002 238 aa4.03□□□□□ -1.76
CHD6-203ENST00000373233 PSORS1C2Q9UIG4 136 aa4.03□□□□□ -1.76
CHD6-203ENST00000373233 ANAPC11Q9NYG5 84 aa4.02□□□□□ -1.77
CHD6-203ENST00000373233 CSMD1Q96PZ7 3565 aa4.02□□□□□ -1.77
CHD6-203ENST00000373233 RPL37P61927 97 aaKnown RBP4.02□□□□□ -1.77
CHD6-203ENST00000373233 Q8NDZ9 215 aa4.02□□□□□ -1.77
CHD6-203ENST00000373233 FBN1P35555 2871 aaKnown RBP4.02□□□□□ -1.77
CHD6-203ENST00000373233 LINC00304Q8N9R0 145 aa4.01□□□□□ -1.77
CHD6-203ENST00000373233 H1FX-AS1Q4G0G2 97 aa4.01□□□□□ -1.77
CHD6-203ENST00000373233 ZNF861PO60384 105 aa4□□□□□ -1.77
CHD6-203ENST00000373233 LCE6AA0A183 80 aa4□□□□□ -1.77
CHD6-203ENST00000373233 A8MUU9 505 aa3.99□□□□□ -1.77
CHD6-203ENST00000373233 LINC00472Q9H8W2 130 aa3.99□□□□□ -1.77
CHD6-203ENST00000373233 ZFHX3Q15911 3703 aa3.98□□□□□ -1.77
CHD6-203ENST00000373233 TENM2Q9NT68 2774 aa3.98□□□□□ -1.77
CHD6-203ENST00000373233 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.98□□□□□ -1.77
CHD6-203ENST00000373233 SPRR1AP35321 89 aa3.97□□□□□ -1.77
CHD6-203ENST00000373233 TNP2Q05952 138 aa3.96□□□□□ -1.77
CHD6-203ENST00000373233 C20orf166-AS1Q96NR2 134 aa3.96□□□□□ -1.78
CHD6-203ENST00000373233 TRRAPQ9Y4A5 3859 aa3.96□□□□□ -1.78
CHD6-203ENST00000373233 KRTAP29-1A8MX34 341 aaPredicted RBP3.94□□□□□ -1.78
CHD6-203ENST00000373233 KRTAP21-3Q3LHN1 58 aa3.92□□□□□ -1.78
CHD6-203ENST00000373233 S4R3F8 94 aa3.92□□□□□ -1.78
CHD6-203ENST00000373233 SVEP1Q4LDE5 3571 aa3.92□□□□□ -1.78
CHD6-203ENST00000373233 SPRR1BP22528 89 aa3.92□□□□□ -1.78
CHD6-203ENST00000373233 ANK3Q12955 4377 aaKnown RBP3.92□□□□□ -1.78
CHD6-203ENST00000373233 PLAC8Q9NZF1 115 aa3.91□□□□□ -1.78
CHD6-203ENST00000373233 ZNF469Q96JG9 3925 aaPredicted RBP3.91□□□□□ -1.78
CHD6-203ENST00000373233 PANO1I0J062 215 aa3.9□□□□□ -1.79
CHD6-203ENST00000373233 Q6ZRN7 208 aaPredicted RBP3.89□□□□□ -1.79
CHD6-203ENST00000373233 SMR3BP02814 79 aaPredicted RBP3.88□□□□□ -1.79
CHD6-203ENST00000373233 KRTAP10-2P60368 255 aa3.87□□□□□ -1.79
CHD6-203ENST00000373233 KRTAP4-16G5E9R7 235 aaPredicted RBP3.87□□□□□ -1.79
CHD6-203ENST00000373233 M0R2T5 61 aa3.86□□□□□ -1.79
CHD6-203ENST00000373233 KRTAP10-1P60331 282 aa3.86□□□□□ -1.79
CHD6-203ENST00000373233 Q6ZSA8 131 aa3.85□□□□□ -1.79
CHD6-203ENST00000373233 KRTAP11-1Q8IUC1 163 aa3.85□□□□□ -1.79
CHD6-203ENST00000373233 PLAC4Q8WY50 150 aa3.84□□□□□ -1.8
CHD6-203ENST00000373233 KRTAP7-1Q8IUC3 87 aa3.83□□□□□ -1.8
CHD6-203ENST00000373233 R4GN34 69 aa3.82□□□□□ -1.8
CHD6-203ENST00000373233 NOTCH2NLQ7Z3S9 236 aa3.82□□□□□ -1.8
CHD6-203ENST00000373233 CSMD2Q7Z408 3487 aa3.82□□□□□ -1.8
CHD6-203ENST00000373233 M0QZ58 72 aa3.82□□□□□ -1.8
CHD6-203ENST00000373233 CMYA5Q8N3K9 4069 aa3.79□□□□□ -1.8
CHD6-203ENST00000373233 DNAH3Q8TD57 4116 aa3.78□□□□□ -1.8
CHD6-203ENST00000373233 C10orf95Q9H7T3 257 aa3.78□□□□□ -1.8
CHD6-203ENST00000373233 ANK2Q01484 3957 aa3.76□□□□□ -1.81
CHD6-203ENST00000373233 KRTAP13-1Q8IUC0 172 aa3.75□□□□□ -1.81
CHD6-203ENST00000373233 MEGF8Q7Z7M0 2845 aa3.75□□□□□ -1.81
CHD6-203ENST00000373233 FBN3Q75N90 2809 aa3.73□□□□□ -1.81
CHD6-203ENST00000373233 Q5VSD8 79 aa3.73□□□□□ -1.81
CHD6-203ENST00000373233 P0C880 135 aa3.72□□□□□ -1.81
CHD6-203ENST00000373233 COL7A1Q02388 2944 aa3.72□□□□□ -1.81
CHD6-203ENST00000373233 H0YAA0 97 aa3.7□□□□□ -1.82
CHD6-203ENST00000373233 ALMS1Q8TCU4 4167 aa3.68□□□□□ -1.82
CHD6-203ENST00000373233 CUBNO60494 3623 aa3.68□□□□□ -1.82
CHD6-203ENST00000373233 KRTAP13-2Q52LG2 175 aa3.66□□□□□ -1.82
CHD6-203ENST00000373233 PP632Q6XCG6 107 aa3.65□□□□□ -1.83
CHD6-203ENST00000373233 DNAH7Q8WXX0 4024 aa3.61□□□□□ -1.83
CHD6-203ENST00000373233 RPS29P62273 56 aaKnown RBP3.61□□□□□ -1.83
CHD6-203ENST00000373233 HECTD4Q9Y4D8 3996 aa3.6□□□□□ -1.83
CHD6-203ENST00000373233 A0A1B0GVY2 172 aa3.57□□□□□ -1.84
CHD6-203ENST00000373233 KRTAP1-4P0C5Y4 121 aa3.57□□□□□ -1.84
CHD6-203ENST00000373233 HUWE1Q7Z6Z7 4374 aaKnown RBP3.57□□□□□ -1.84
CHD6-203ENST00000373233 LYSTQ99698 3801 aa3.54□□□□□ -1.84
CHD6-203ENST00000373233 TNP1P09430 55 aa3.54□□□□□ -1.84
CHD6-203ENST00000373233 DNAH6Q9C0G6 4158 aa3.53□□□□□ -1.84
CHD6-203ENST00000373233 PRKDCP78527 4128 aaKnown RBP3.5□□□□□ -1.85
CHD6-203ENST00000373233 KRTAP10-8P60410 259 aa3.48□□□□□ -1.85
CHD6-203ENST00000373233 TPRXLQ17RH7 258 aa3.48□□□□□ -1.85
CHD6-203ENST00000373233 DNAH9Q9NYC9 4486 aa3.47□□□□□ -1.85
CHD6-203ENST00000373233 CSMD3Q7Z407 3707 aa3.46□□□□□ -1.86
CHD6-203ENST00000373233 DYNC2H1Q8NCM8 4307 aaKnown RBP3.46□□□□□ -1.86
CHD6-203ENST00000373233 KRTAP13-3Q3SY46 172 aa3.44□□□□□ -1.86
CHD6-203ENST00000373233 DNAH1Q9P2D7 4330 aa3.41□□□□□ -1.86
CHD6-203ENST00000373233 KRTAP15-1Q3LI76 137 aa3.41□□□□□ -1.86
CHD6-203ENST00000373233 KMT2AQ03164 3969 aa3.4□□□□□ -1.87
CHD6-203ENST00000373233 XP32Q5T750 250 aa3.38□□□□□ -1.87
CHD6-203ENST00000373233 VPS13DQ5THJ4 4388 aa3.37□□□□□ -1.87
CHD6-203ENST00000373233 KRTAP12-2P59991 146 aa3.36□□□□□ -1.87
CHD6-203ENST00000373233 STARD9Q9P2P6 4700 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 249.1 ms