RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 COA5Q86WW8 74 aa3.34□□□□□ -1.87
ATG4A-204ENST00000372246 ANAPC11Q9NYG5 84 aa3.34□□□□□ -1.87
ATG4A-204ENST00000372246 MGAM2Q2M2H8 2515 aa3.34□□□□□ -1.88
ATG4A-204ENST00000372246 PANO1I0J062 215 aa3.33□□□□□ -1.88
ATG4A-204ENST00000372246 SPINK7P58062 85 aa3.33□□□□□ -1.88
ATG4A-204ENST00000372246 A0A087X002 238 aa3.33□□□□□ -1.88
ATG4A-204ENST00000372246 IGLV9-49A0A0B4J1Y8 123 aa3.33□□□□□ -1.88
ATG4A-204ENST00000372246 ASB16-AS1Q495Z4 193 aa3.33□□□□□ -1.88
ATG4A-204ENST00000372246 NOTCH2NLQ7Z3S9 236 aa3.33□□□□□ -1.88
ATG4A-204ENST00000372246 Q75L30 129 aa3.32□□□□□ -1.88
ATG4A-204ENST00000372246 CDC42SE1Q9NRR8 79 aa3.32□□□□□ -1.88
ATG4A-204ENST00000372246 C9orf163Q8N9P6 203 aa3.32□□□□□ -1.88
ATG4A-204ENST00000372246 TLX1NBP0CAT3 122 aa3.31□□□□□ -1.88
ATG4A-204ENST00000372246 DNAH10OSP0CZ25 163 aa3.31□□□□□ -1.88
ATG4A-204ENST00000372246 ADM2Q7Z4H4 148 aa3.31□□□□□ -1.88
ATG4A-204ENST00000372246 PRAC1Q96KF2 57 aa3.31□□□□□ -1.88
ATG4A-204ENST00000372246 HUWE1Q7Z6Z7 4374 aaKnown RBP3.31□□□□□ -1.88
ATG4A-204ENST00000372246 MMP24-AS1A0A0U1RRL7 71 aa3.31□□□□□ -1.88
ATG4A-204ENST00000372246 LIMD2Q9BT23 127 aa3.31□□□□□ -1.88
ATG4A-204ENST00000372246 LINC00472Q9H8W2 130 aa3.31□□□□□ -1.88
ATG4A-204ENST00000372246 KRTAP23-1A1A580 65 aa3.3□□□□□ -1.88
ATG4A-204ENST00000372246 IGLV5-37A0A075B6J1 123 aa3.3□□□□□ -1.88
ATG4A-204ENST00000372246 IGHV6-1A0A0B4J1U7 121 aa3.3□□□□□ -1.88
ATG4A-204ENST00000372246 NDUFB1O75438 58 aa3.3□□□□□ -1.88
ATG4A-204ENST00000372246 MOBPQ13875 183 aa3.3□□□□□ -1.88
ATG4A-204ENST00000372246 LOC101927531A0A1B0GV80 90 aa3.29□□□□□ -1.88
ATG4A-204ENST00000372246 A8MWP4 228 aa3.29□□□□□ -1.88
ATG4A-204ENST00000372246 RETNLBQ9BQ08 111 aa3.29□□□□□ -1.88
ATG4A-204ENST00000372246 H3BNG1 76 aa3.29□□□□□ -1.88
ATG4A-204ENST00000372246 HRES1P13985 223 aa3.28□□□□□ -1.88
ATG4A-204ENST00000372246 KRTAP17-1Q9BYP8 105 aa3.28□□□□□ -1.88
ATG4A-204ENST00000372246 A0A1B0GW54 56 aa3.27□□□□□ -1.89
ATG4A-204ENST00000372246 SPINK6Q6UWN8 80 aa3.27□□□□□ -1.89
ATG4A-204ENST00000372246 Q96NJ1 140 aa3.27□□□□□ -1.89
ATG4A-204ENST00000372246 IGLV7-46A0A075B6I9 117 aa3.26□□□□□ -1.89
ATG4A-204ENST00000372246 Q5W150 140 aa3.26□□□□□ -1.89
ATG4A-204ENST00000372246 SPANXA2-OT1Q8N9U9 137 aa3.26□□□□□ -1.89
ATG4A-204ENST00000372246 IGLV8-61A0A075B6I0 122 aa3.26□□□□□ -1.89
ATG4A-204ENST00000372246 DNAH8Q96JB1 4490 aa3.25□□□□□ -1.89
ATG4A-204ENST00000372246 PLECQ15149 4684 aaKnown RBP3.24□□□□□ -1.89
ATG4A-204ENST00000372246 FBN3Q75N90 2809 aa3.24□□□□□ -1.89
ATG4A-204ENST00000372246 TGP01266 2768 aa3.24□□□□□ -1.89
ATG4A-204ENST00000372246 DNAH3Q8TD57 4116 aa3.24□□□□□ -1.89
ATG4A-204ENST00000372246 C8orf17Q9NRJ1 99 aa3.24□□□□□ -1.89
ATG4A-204ENST00000372246 ZNF706Q9Y5V0 76 aaPredicted RBP3.24□□□□□ -1.89
ATG4A-204ENST00000372246 KRTAP24-1Q3LI83 254 aa3.23□□□□□ -1.89
ATG4A-204ENST00000372246 PLAC8Q9NZF1 115 aa3.23□□□□□ -1.89
ATG4A-204ENST00000372246 MEGF8Q7Z7M0 2845 aa3.23□□□□□ -1.89
ATG4A-204ENST00000372246 DNAH17Q9UFH2 4485 aa3.22□□□□□ -1.89
ATG4A-204ENST00000372246 KMT2AQ03164 3969 aa3.22□□□□□ -1.89
ATG4A-204ENST00000372246 Q6ZR54 194 aa3.22□□□□□ -1.89
ATG4A-204ENST00000372246 LINC01558Q9Y6Z2 57 aa3.22□□□□□ -1.89
ATG4A-204ENST00000372246 UBE2DNLQ8IWF7 75 aa3.21□□□□□ -1.9
ATG4A-204ENST00000372246 H3BPC8 53 aa3.2□□□□□ -1.9
ATG4A-204ENST00000372246 A0A1B0GVX0 72 aa3.2□□□□□ -1.9
ATG4A-204ENST00000372246 KRTAP15-1Q3LI76 137 aa3.2□□□□□ -1.9
ATG4A-204ENST00000372246 STARD9Q9P2P6 4700 aa3.2□□□□□ -1.9
ATG4A-204ENST00000372246 SPRR1BP22528 89 aa3.19□□□□□ -1.9
ATG4A-204ENST00000372246 DNAH6Q9C0G6 4158 aa3.19□□□□□ -1.9
ATG4A-204ENST00000372246 KRTAP13-1Q8IUC0 172 aa3.19□□□□□ -1.9
ATG4A-204ENST00000372246 MRPL34Q9BQ48 92 aaKnown RBP3.19□□□□□ -1.9
ATG4A-204ENST00000372246 RTL8CO15255 209 aa3.18□□□□□ -1.9
ATG4A-204ENST00000372246 HECTD4Q9Y4D8 3996 aa3.18□□□□□ -1.9
ATG4A-204ENST00000372246 KRTAP5-3Q6L8H2 238 aa3.18□□□□□ -1.9
ATG4A-204ENST00000372246 CIRBP-AS1Q8TBR5 109 aa3.18□□□□□ -1.9
ATG4A-204ENST00000372246 CDK2AP2O75956 126 aa3.17□□□□□ -1.9
ATG4A-204ENST00000372246 PSORS1C2Q9UIG4 136 aa3.17□□□□□ -1.9
ATG4A-204ENST00000372246 DNAH2Q9P225 4427 aa3.17□□□□□ -1.9
ATG4A-204ENST00000372246 ALMS1Q8TCU4 4167 aa3.15□□□□□ -1.9
ATG4A-204ENST00000372246 TP53AIP1Q9HCN2 124 aa3.15□□□□□ -1.91
ATG4A-204ENST00000372246 FLG2Q5D862 2391 aaPredicted RBP3.15□□□□□ -1.91
ATG4A-204ENST00000372246 SPINK1P00995 79 aa3.15□□□□□ -1.91
ATG4A-204ENST00000372246 VPS13DQ5THJ4 4388 aa3.14□□□□□ -1.91
ATG4A-204ENST00000372246 KRTAP13-3Q3SY46 172 aa3.14□□□□□ -1.91
ATG4A-204ENST00000372246 APLNQ9ULZ1 77 aa3.14□□□□□ -1.91
ATG4A-204ENST00000372246 A0A1B0GU69 56 aa3.13□□□□□ -1.91
ATG4A-204ENST00000372246 ROMO1P60602 79 aa3.13□□□□□ -1.91
ATG4A-204ENST00000372246 CSAG1Q6PB30 78 aa3.13□□□□□ -1.91
ATG4A-204ENST00000372246 SPACA4Q8TDM5 124 aa3.13□□□□□ -1.91
ATG4A-204ENST00000372246 IGKV2D-30A0A075B6S6 120 aa3.12□□□□□ -1.91
ATG4A-204ENST00000372246 IGKV2-30P06310 120 aa3.12□□□□□ -1.91
ATG4A-204ENST00000372246 C1orf134Q5TEV5 83 aa3.12□□□□□ -1.91
ATG4A-204ENST00000372246 Q6ZRN7 208 aaPredicted RBP3.12□□□□□ -1.91
ATG4A-204ENST00000372246 CRIPTQ9P021 101 aa3.12□□□□□ -1.91
ATG4A-204ENST00000372246 NBDYA0A0U1RRE5 68 aa3.11□□□□□ -1.91
ATG4A-204ENST00000372246 PRKDCP78527 4128 aaKnown RBP3.11□□□□□ -1.91
ATG4A-204ENST00000372246 DNAH11Q96DT5 4516 aa3.11□□□□□ -1.91
ATG4A-204ENST00000372246 IGLV5-52A0A0A0MRZ9 124 aa3.11□□□□□ -1.91
ATG4A-204ENST00000372246 ACYP2P14621 99 aa3.11□□□□□ -1.91
ATG4A-204ENST00000372246 LRP1BQ9NZR2 4599 aa3.1□□□□□ -1.91
ATG4A-204ENST00000372246 LINC00483Q53H64 154 aa3.1□□□□□ -1.91
ATG4A-204ENST00000372246 MIR22HGQ0VDD5 57 aa3.1□□□□□ -1.91
ATG4A-204ENST00000372246 FAT2Q9NYQ8 4349 aa3.09□□□□□ -1.91
ATG4A-204ENST00000372246 ZNF861PO60384 105 aa3.09□□□□□ -1.92
ATG4A-204ENST00000372246 C14orf177Q52M58 125 aa3.09□□□□□ -1.92
ATG4A-204ENST00000372246 DMAC1Q96GE9 116 aa3.09□□□□□ -1.92
ATG4A-204ENST00000372246 A0A087WTM6 91 aa3.08□□□□□ -1.92
ATG4A-204ENST00000372246 DNHD1Q96M86 4753 aa3.07□□□□□ -1.92
ATG4A-204ENST00000372246 SPATA8Q6RVD6 105 aa3.07□□□□□ -1.92
ATG4A-204ENST00000372246 DYNC2H1Q8NCM8 4307 aaKnown RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 267.9 ms