RNA–Protein interactions for RNA: ENST00000363925.1

RNU4-1-201, Transcript of RNA, U4 small nuclear 1, humanhuman

BASIC

Gene RNU4-1, Length 141 nt, Biotype snRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-1-201ENST00000363925 TOGARAM1Q9Y4F4 1720 aa-2.33□□□□□ -2.78
RNU4-1-201ENST00000363925 A0A087WXM4 84 aa-2.33□□□□□ -2.78
RNU4-1-201ENST00000363925 DEFB131BA0A096LNP1 70 aa-2.33□□□□□ -2.78
RNU4-1-201ENST00000363925 MMP24-AS1A0A0U1RRL7 71 aa-2.33□□□□□ -2.78
RNU4-1-201ENST00000363925 THOC2Q8NI27 1593 aaKnown RBP-2.34□□□□□ -2.78
RNU4-1-201ENST00000363925 TNP1P09430 55 aa-2.34□□□□□ -2.78
RNU4-1-201ENST00000363925 MT1XP80297 61 aa-2.34□□□□□ -2.78
RNU4-1-201ENST00000363925 KIF14Q15058 1648 aa-2.35□□□□□ -2.78
RNU4-1-201ENST00000363925 PVALEFA0A1B0GWK0 134 aa-2.35□□□□□ -2.79
RNU4-1-201ENST00000363925 KANTRA0A1W2PQU2 76 aa-2.35□□□□□ -2.79
RNU4-1-201ENST00000363925 WT1-ASQ06250 92 aa-2.35□□□□□ -2.79
RNU4-1-201ENST00000363925 RICTORQ6R327 1708 aa-2.35□□□□□ -2.79
RNU4-1-201ENST00000363925 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-2.36□□□□□ -2.791e-323■■■□□ 14.7
RNU4-1-201ENST00000363925 KIAA0586Q9BVV6 1533 aa-2.36□□□□□ -2.79
RNU4-1-201ENST00000363925 MAP3K4Q9Y6R4 1608 aa-2.37□□□□□ -2.79
RNU4-1-201ENST00000363925 ITPR1Q14643 2758 aa-2.38□□□□□ -2.79
RNU4-1-201ENST00000363925 SMR3BP02814 79 aaPredicted RBP-2.38□□□□□ -2.79
RNU4-1-201ENST00000363925 V9GYS6 101 aa-2.38□□□□□ -2.79
RNU4-1-201ENST00000363925 CFAP43Q8NDM7 1665 aa-2.38□□□□□ -2.79
RNU4-1-201ENST00000363925 MYO9AB2RTY4 2548 aa-2.38□□□□□ -2.79
RNU4-1-201ENST00000363925 PPLO60437 1756 aa-2.38□□□□□ -2.79
RNU4-1-201ENST00000363925 TJP1Q07157 1748 aa-2.39□□□□□ -2.79
RNU4-1-201ENST00000363925 DNAH17Q9UFH2 4485 aa-2.39□□□□□ -2.79
RNU4-1-201ENST00000363925 TRRAPQ9Y4A5 3859 aa-2.39□□□□□ -2.79
RNU4-1-201ENST00000363925 ATP5EP2Q5VTU8 51 aa-2.39□□□□□ -2.79
RNU4-1-201ENST00000363925 SPTAN1Q13813 2472 aaKnown RBP-2.39□□□□□ -2.79
RNU4-1-201ENST00000363925 CHD7Q9P2D1 2997 aa-2.39□□□□□ -2.79
RNU4-1-201ENST00000363925 ZC3H13Q5T200 1668 aaKnown RBP-2.4□□□□□ -2.79
RNU4-1-201ENST00000363925 LRBAP50851 2863 aa-2.4□□□□□ -2.79
RNU4-1-201ENST00000363925 IGLV5-48A0A075B6I7 105 aa-2.4□□□□□ -2.79
RNU4-1-201ENST00000363925 ABCC3O15438 1527 aa-2.41□□□□□ -2.79
RNU4-1-201ENST00000363925 HMGA1P17096 107 aaKnown RBP-2.42□□□□□ -2.8
RNU4-1-201ENST00000363925 UBL5Q9BZL1 73 aa-2.42□□□□□ -2.8
RNU4-1-201ENST00000363925 ITSN2Q9NZM3 1697 aa-2.42□□□□□ -2.8
RNU4-1-201ENST00000363925 HFM1A2PYH4 1435 aa-2.42□□□□□ -2.8
RNU4-1-201ENST00000363925 CDC42BPAQ5VT25 1732 aa-2.44□□□□□ -2.8
RNU4-1-201ENST00000363925 NRAPQ86VF7 1730 aa-2.44□□□□□ -2.8
RNU4-1-201ENST00000363925 SMIM13P0DJ93 91 aa-2.44□□□□□ -2.8
RNU4-1-201ENST00000363925 MINOS1Q5TGZ0 78 aa-2.44□□□□□ -2.8
RNU4-1-201ENST00000363925 KIF1AQ12756 1690 aa-2.44□□□□□ -2.8
RNU4-1-201ENST00000363925 CRIP1P50238 77 aa-2.45□□□□□ -2.8
RNU4-1-201ENST00000363925 BVES-AS1Q5T3Y7 98 aa-2.45□□□□□ -2.8
RNU4-1-201ENST00000363925 ARHGAP35Q9NRY4 1499 aa-2.45□□□□□ -2.8
RNU4-1-201ENST00000363925 LY75O60449 1722 aa-2.46□□□□□ -2.8
RNU4-1-201ENST00000363925 DNAH5Q8TE73 4624 aa-2.46□□□□□ -2.8
RNU4-1-201ENST00000363925 CEP295Q9C0D2 2601 aa-2.46□□□□□ -2.8
RNU4-1-201ENST00000363925 CELSR3Q9NYQ7 3312 aa-2.47□□□□□ -2.81
RNU4-1-201ENST00000363925 RPS27P42677 84 aaKnown RBP-2.48□□□□□ -2.81
RNU4-1-201ENST00000363925 RPS27LQ71UM5 84 aaKnown RBP-2.48□□□□□ -2.81
RNU4-1-201ENST00000363925 CSMD1Q96PZ7 3565 aa-2.49□□□□□ -2.81
RNU4-1-201ENST00000363925 RALGAPBQ86X10 1494 aa-2.49□□□□□ -2.81
RNU4-1-201ENST00000363925 KCNQ1DNQ9H478 68 aa-2.49□□□□□ -2.81
RNU4-1-201ENST00000363925 NOP10Q9NPE3 64 aaKnown RBP-2.49□□□□□ -2.81
RNU4-1-201ENST00000363925 H3BUA1 57 aa-2.5□□□□□ -2.81
RNU4-1-201ENST00000363925 KRTAP8-1Q8IUC2 63 aa-2.51□□□□□ -2.81
RNU4-1-201ENST00000363925 TDRG1Q3Y452 100 aa-2.52□□□□□ -2.81
RNU4-1-201ENST00000363925 KDM5DQ9BY66 1539 aa-2.52□□□□□ -2.81
RNU4-1-201ENST00000363925 MT1EP04732 61 aa-2.53□□□□□ -2.81
RNU4-1-201ENST00000363925 UACAQ9BZF9 1416 aa-2.53□□□□□ -2.81
RNU4-1-201ENST00000363925 MT1HL1P0DM35 61 aa-2.54□□□□□ -2.82
RNU4-1-201ENST00000363925 FCER1GP30273 86 aa-2.54□□□□□ -2.82
RNU4-1-201ENST00000363925 COL6A5A8TX70 2615 aa-2.55□□□□□ -2.82
RNU4-1-201ENST00000363925 DEFB121Q5J5C9 76 aa-2.55□□□□□ -2.82
RNU4-1-201ENST00000363925 ADGRG4Q8IZF6 3080 aa-2.55□□□□□ -2.82
RNU4-1-201ENST00000363925 LRRIQ1Q96JM4 1722 aa-2.55□□□□□ -2.82
RNU4-1-201ENST00000363925 RNF17Q9BXT8 1623 aaKnown RBP-2.56□□□□□ -2.82
RNU4-1-201ENST00000363925 TTC37Q6PGP7 1564 aa-2.56□□□□□ -2.82
RNU4-1-201ENST00000363925 SFTA3P0C7M3 94 aa-2.56□□□□□ -2.82
RNU4-1-201ENST00000363925 ADIRFQ15847 76 aa-2.56□□□□□ -2.82
RNU4-1-201ENST00000363925 DNAH10Q8IVF4 4471 aa-2.57□□□□□ -2.82
RNU4-1-201ENST00000363925 ST20Q9HBF5 79 aa-2.57□□□□□ -2.82
RNU4-1-201ENST00000363925 C6orf48Q9UBA6 75 aa-2.57□□□□□ -2.82
RNU4-1-201ENST00000363925 ETDCA0A1B0GVM5 59 aa-2.58□□□□□ -2.82
RNU4-1-201ENST00000363925 ENHOQ6UWT2 76 aa-2.59□□□□□ -2.82
RNU4-1-201ENST00000363925 INO80Q9ULG1 1556 aaPredicted RBP-2.6□□□□□ -2.83
RNU4-1-201ENST00000363925 H3BUT2 72 aa-2.6□□□□□ -2.83
RNU4-1-201ENST00000363925 MT1LQ93083 61 aa-2.6□□□□□ -2.83
RNU4-1-201ENST00000363925 NCBP2-AS2Q69YL0 99 aa-2.61□□□□□ -2.83
RNU4-1-201ENST00000363925 CFAP46Q8IYW2 2715 aa-2.61□□□□□ -2.83
RNU4-1-201ENST00000363925 SMG1Q96Q15 3661 aaKnown RBP-2.61□□□□□ -2.83
RNU4-1-201ENST00000363925 EYSQ5T1H1 3165 aa-2.65□□□□□ -2.83
RNU4-1-201ENST00000363925 MGAQ8IWI9 3026 aa-2.66□□□□□ -2.83
RNU4-1-201ENST00000363925 S100A13Q99584 98 aa-2.66□□□□□ -2.84
RNU4-1-201ENST00000363925 MAST1Q9Y2H9 1570 aa-2.66□□□□□ -2.84
RNU4-1-201ENST00000363925 NHSQ6T4R5 1651 aa-2.66□□□□□ -2.84
RNU4-1-201ENST00000363925 MYO5CQ9NQX4 1742 aa-2.67□□□□□ -2.84
RNU4-1-201ENST00000363925 H3BVH4 76 aa-2.68□□□□□ -2.84
RNU4-1-201ENST00000363925 EIF2AK4Q9P2K8 1649 aaKnown RBP-2.68□□□□□ -2.84
RNU4-1-201ENST00000363925 LMTK2Q8IWU2 1503 aa-2.68□□□□□ -2.84
RNU4-1-201ENST00000363925 M0QY20 66 aa-2.7□□□□□ -2.84
RNU4-1-201ENST00000363925 ABCC1P33527 1531 aa-2.71□□□□□ -2.84
RNU4-1-201ENST00000363925 MT1GP13640 62 aa-2.72□□□□□ -2.84
RNU4-1-201ENST00000363925 A0A1B0GUL6 1792 aa-2.73□□□□□ -2.85
RNU4-1-201ENST00000363925 LINC01546A6NGU7 62 aa-2.73□□□□□ -2.85
RNU4-1-201ENST00000363925 CDC42BPGQ6DT37 1551 aa-2.74□□□□□ -2.85
RNU4-1-201ENST00000363925 M0QZ58 72 aa-2.75□□□□□ -2.85
RNU4-1-201ENST00000363925 DCAF1Q9Y4B6 1507 aa-2.75□□□□□ -2.85
RNU4-1-201ENST00000363925 CD163L1Q9NR16 1453 aa-2.77□□□□□ -2.85
RNU4-1-201ENST00000363925 ABCC6O95255 1503 aa-2.77□□□□□ -2.85
RNU4-1-201ENST00000363925 DEFB114Q30KQ6 69 aa-2.8□□□□□ -2.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms