RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 WFDC10BQ8IUB3 73 aa4.81□□□□□ -1.64
UBE2D3-204ENST00000349311 KRTAP4-16G5E9R7 235 aaPredicted RBP4.8□□□□□ -1.64
UBE2D3-204ENST00000349311 KRTAP10-12P60413 245 aa4.8□□□□□ -1.64
UBE2D3-204ENST00000349311 C11orf45Q8TAV5 145 aa4.8□□□□□ -1.64
UBE2D3-204ENST00000349311 IGLV8-61A0A075B6I0 122 aa4.79□□□□□ -1.64
UBE2D3-204ENST00000349311 RPL37AP8A6NKH3 93 aa4.79□□□□□ -1.64
UBE2D3-204ENST00000349311 TLX1NBP0CAT3 122 aa4.79□□□□□ -1.64
UBE2D3-204ENST00000349311 SPART-AS1P0CW21 52 aa4.79□□□□□ -1.64
UBE2D3-204ENST00000349311 C15orf56Q8N910 161 aa4.79□□□□□ -1.64
UBE2D3-204ENST00000349311 IGLV1-50A0A075B6I6 118 aa4.78□□□□□ -1.64
UBE2D3-204ENST00000349311 H3BNG1 76 aa4.78□□□□□ -1.64
UBE2D3-204ENST00000349311 CNBPP62633 177 aaKnown RBP4.78□□□□□ -1.64
UBE2D3-204ENST00000349311 KRTAP26-1Q6PEX3 210 aa4.78□□□□□ -1.64
UBE2D3-204ENST00000349311 K7EIL1 84 aa4.77□□□□□ -1.65
UBE2D3-204ENST00000349311 IGFL1Q6UW32 110 aa4.77□□□□□ -1.65
UBE2D3-204ENST00000349311 PRKDCP78527 4128 aaKnown RBP4.77□□□□□ -1.65
UBE2D3-204ENST00000349311 MEGF8Q7Z7M0 2845 aa4.77□□□□□ -1.65
UBE2D3-204ENST00000349311 NDUFAF8A1L188 74 aa4.76□□□□□ -1.65
UBE2D3-204ENST00000349311 A8MWP4 228 aa4.76□□□□□ -1.65
UBE2D3-204ENST00000349311 TP53AIP1Q9HCN2 124 aa4.76□□□□□ -1.65
UBE2D3-204ENST00000349311 HUWE1Q7Z6Z7 4374 aaKnown RBP4.76□□□□□ -1.65
UBE2D3-204ENST00000349311 TGP01266 2768 aa4.76□□□□□ -1.65
UBE2D3-204ENST00000349311 COL7A1Q02388 2944 aa4.75□□□□□ -1.65
UBE2D3-204ENST00000349311 HTN3P15516 51 aa4.75□□□□□ -1.65
UBE2D3-204ENST00000349311 DEFB116Q30KQ4 102 aa4.75□□□□□ -1.65
UBE2D3-204ENST00000349311 DNAH9Q9NYC9 4486 aa4.74□□□□□ -1.65
UBE2D3-204ENST00000349311 A0A087WSZ3 146 aa4.74□□□□□ -1.65
UBE2D3-204ENST00000349311 SPAG11AQ6PDA7 123 aa4.74□□□□□ -1.65
UBE2D3-204ENST00000349311 STAB2Q8WWQ8 2551 aa4.74□□□□□ -1.65
UBE2D3-204ENST00000349311 SPINK7P58062 85 aa4.73□□□□□ -1.65
UBE2D3-204ENST00000349311 LINC00313P59037 77 aa4.73□□□□□ -1.65
UBE2D3-204ENST00000349311 KRTAP10-5P60370 271 aa4.73□□□□□ -1.65
UBE2D3-204ENST00000349311 LINC01554Q52M75 96 aa4.73□□□□□ -1.65
UBE2D3-204ENST00000349311 REG3GQ6UW15 175 aa4.73□□□□□ -1.65
UBE2D3-204ENST00000349311 DEFB131BA0A096LNP1 70 aa4.72□□□□□ -1.65
UBE2D3-204ENST00000349311 DEFB4AO15263 64 aa4.72□□□□□ -1.65
UBE2D3-204ENST00000349311 RPL37AP61513 92 aaKnown RBP4.72□□□□□ -1.65
UBE2D3-204ENST00000349311 DYNC2H1Q8NCM8 4307 aaKnown RBP4.72□□□□□ -1.65
UBE2D3-204ENST00000349311 MMP24-AS1A0A0U1RRL7 71 aa4.71□□□□□ -1.66
UBE2D3-204ENST00000349311 DNAH7Q8WXX0 4024 aa4.7□□□□□ -1.66
UBE2D3-204ENST00000349311 Q6ZR54 194 aa4.7□□□□□ -1.66
UBE2D3-204ENST00000349311 LINC00472Q9H8W2 130 aa4.7□□□□□ -1.66
UBE2D3-204ENST00000349311 HRES1P13985 223 aa4.69□□□□□ -1.66
UBE2D3-204ENST00000349311 PCOTHQ58A44 107 aa4.69□□□□□ -1.66
UBE2D3-204ENST00000349311 LINC01556Q5JQF7 62 aa4.69□□□□□ -1.66
UBE2D3-204ENST00000349311 SPRR1BP22528 89 aa4.68□□□□□ -1.66
UBE2D3-204ENST00000349311 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.68□□□□□ -1.66
UBE2D3-204ENST00000349311 H0Y9J4 135 aa4.67□□□□□ -1.66
UBE2D3-204ENST00000349311 IGKV2-24A0A0C4DH68 120 aa4.65□□□□□ -1.67
UBE2D3-204ENST00000349311 FAM168BA1KXE4 195 aa4.65□□□□□ -1.67
UBE2D3-204ENST00000349311 RETNLBQ9BQ08 111 aa4.64□□□□□ -1.67
UBE2D3-204ENST00000349311 A0A0G2JQZ4 141 aa4.63□□□□□ -1.67
UBE2D3-204ENST00000349311 A0A1W2PNN7 141 aa4.63□□□□□ -1.67
UBE2D3-204ENST00000349311 SPATA8Q6RVD6 105 aa4.63□□□□□ -1.67
UBE2D3-204ENST00000349311 C8orf17Q9NRJ1 99 aa4.63□□□□□ -1.67
UBE2D3-204ENST00000349311 CSMD3Q7Z407 3707 aa4.62□□□□□ -1.67
UBE2D3-204ENST00000349311 RTL8CO15255 209 aa4.62□□□□□ -1.67
UBE2D3-204ENST00000349311 DNAH10OSP0CZ25 163 aa4.62□□□□□ -1.67
UBE2D3-204ENST00000349311 ACYP2P14621 99 aa4.62□□□□□ -1.67
UBE2D3-204ENST00000349311 DNAH6Q9C0G6 4158 aa4.6□□□□□ -1.67
UBE2D3-204ENST00000349311 DNAH1Q9P2D7 4330 aa4.6□□□□□ -1.67
UBE2D3-204ENST00000349311 A0A1B0GVY2 172 aa4.59□□□□□ -1.67
UBE2D3-204ENST00000349311 NUPR2A6NF83 97 aa4.59□□□□□ -1.67
UBE2D3-204ENST00000349311 PRLHP81277 87 aa4.59□□□□□ -1.67
UBE2D3-204ENST00000349311 MRPL34Q9BQ48 92 aaKnown RBP4.59□□□□□ -1.67
UBE2D3-204ENST00000349311 TENM2Q9NT68 2774 aa4.59□□□□□ -1.67
UBE2D3-204ENST00000349311 A0A1B0GU69 56 aa4.58□□□□□ -1.68
UBE2D3-204ENST00000349311 A0A1B0GVX0 72 aa4.58□□□□□ -1.68
UBE2D3-204ENST00000349311 APLNQ9ULZ1 77 aa4.58□□□□□ -1.68
UBE2D3-204ENST00000349311 KMT2CQ8NEZ4 4911 aaKnown RBP4.58□□□□□ -1.68
UBE2D3-204ENST00000349311 VPS13DQ5THJ4 4388 aa4.57□□□□□ -1.68
UBE2D3-204ENST00000349311 MIR22HGQ0VDD5 57 aa4.57□□□□□ -1.68
UBE2D3-204ENST00000349311 LCE3CQ5T5A8 94 aa4.57□□□□□ -1.68
UBE2D3-204ENST00000349311 ADM2Q7Z4H4 148 aa4.57□□□□□ -1.68
UBE2D3-204ENST00000349311 ALMS1Q8TCU4 4167 aa4.56□□□□□ -1.68
UBE2D3-204ENST00000349311 UQCR11O14957 56 aa4.56□□□□□ -1.68
UBE2D3-204ENST00000349311 Q96NJ1 140 aa4.55□□□□□ -1.68
UBE2D3-204ENST00000349311 DMAC1Q96GE9 116 aa4.54□□□□□ -1.68
UBE2D3-204ENST00000349311 LYSTQ99698 3801 aa4.54□□□□□ -1.68
UBE2D3-204ENST00000349311 RYR3Q15413 4870 aa4.54□□□□□ -1.68
UBE2D3-204ENST00000349311 IGHV6-1A0A0B4J1U7 121 aa4.53□□□□□ -1.68
UBE2D3-204ENST00000349311 PLECQ15149 4684 aaKnown RBP4.53□□□□□ -1.68
UBE2D3-204ENST00000349311 A0A096LNI7 61 aa4.52□□□□□ -1.69
UBE2D3-204ENST00000349311 CSAG1Q6PB30 78 aa4.52□□□□□ -1.69
UBE2D3-204ENST00000349311 STARD9Q9P2P6 4700 aa4.51□□□□□ -1.69
UBE2D3-204ENST00000349311 CASC10Q5T4H9 136 aa4.51□□□□□ -1.69
UBE2D3-204ENST00000349311 UBE2DNLQ8IWF7 75 aa4.5□□□□□ -1.69
UBE2D3-204ENST00000349311 KRTAP13-3Q3SY46 172 aa4.49□□□□□ -1.69
UBE2D3-204ENST00000349311 ZNF706Q9Y5V0 76 aaPredicted RBP4.49□□□□□ -1.69
UBE2D3-204ENST00000349311 NBDYA0A0U1RRE5 68 aa4.47□□□□□ -1.69
UBE2D3-204ENST00000349311 ZNF861PO60384 105 aa4.46□□□□□ -1.7
UBE2D3-204ENST00000349311 LINC00483Q53H64 154 aa4.46□□□□□ -1.7
UBE2D3-204ENST00000349311 KMT2AQ03164 3969 aa4.46□□□□□ -1.7
UBE2D3-204ENST00000349311 KRTAP9-6A8MVA2 160 aa4.45□□□□□ -1.7
UBE2D3-204ENST00000349311 C1orf134Q5TEV5 83 aa4.45□□□□□ -1.7
UBE2D3-204ENST00000349311 Q6ZRN7 208 aaPredicted RBP4.45□□□□□ -1.7
UBE2D3-204ENST00000349311 KRTAP13-1Q8IUC0 172 aa4.45□□□□□ -1.7
UBE2D3-204ENST00000349311 HECTD4Q9Y4D8 3996 aa4.45□□□□□ -1.7
UBE2D3-204ENST00000349311 DNAH10Q8IVF4 4471 aa4.45□□□□□ -1.7
UBE2D3-204ENST00000349311 FRAS1Q86XX4 4008 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms