RNA–Protein interactions for RNA: ENST00000344337.10

KPNA1-201, Transcript of karyopherin subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA1, Length 6,830 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-201ENST00000344337 ZNF861PO60384 105 aa4.8□□□□□ -1.64
KPNA1-201ENST00000344337 A0A087WTM6 91 aa4.79□□□□□ -1.64
KPNA1-201ENST00000344337 SPRR4Q96PI1 79 aa4.79□□□□□ -1.64
KPNA1-201ENST00000344337 ADM2Q7Z4H4 148 aa4.79□□□□□ -1.64
KPNA1-201ENST00000344337 HRES1P13985 223 aa4.78□□□□□ -1.64
KPNA1-201ENST00000344337 CYP4F30PQ9H0H9 118 aa4.78□□□□□ -1.64
KPNA1-201ENST00000344337 TNP2Q05952 138 aa4.77□□□□□ -1.65
KPNA1-201ENST00000344337 H3BPC8 53 aa4.77□□□□□ -1.65
KPNA1-201ENST00000344337 CSAG1Q6PB30 78 aa4.77□□□□□ -1.65
KPNA1-201ENST00000344337 TLX1NBP0CAT3 122 aa4.77□□□□□ -1.65
KPNA1-201ENST00000344337 MMP24-AS1A0A0U1RRL7 71 aa4.76□□□□□ -1.65
KPNA1-201ENST00000344337 CDC42SE1Q9NRR8 79 aa4.76□□□□□ -1.65
KPNA1-201ENST00000344337 KRTAP26-1Q6PEX3 210 aa4.76□□□□□ -1.65
KPNA1-201ENST00000344337 H3BS24 57 aa4.76□□□□□ -1.65
KPNA1-201ENST00000344337 FBN3Q75N90 2809 aa4.75□□□□□ -1.65
KPNA1-201ENST00000344337 A0A1B0GW54 56 aa4.75□□□□□ -1.65
KPNA1-201ENST00000344337 LCA10Q71F78 164 aa4.75□□□□□ -1.65
KPNA1-201ENST00000344337 FAM229AH3BQW9 127 aa4.74□□□□□ -1.65
KPNA1-201ENST00000344337 IGLV7-43P04211 117 aa4.73□□□□□ -1.65
KPNA1-201ENST00000344337 IGLV7-46A0A075B6I9 117 aa4.73□□□□□ -1.65
KPNA1-201ENST00000344337 PLA2G2DQ9UNK4 145 aa4.72□□□□□ -1.65
KPNA1-201ENST00000344337 KRTAP7-1Q8IUC3 87 aa4.72□□□□□ -1.65
KPNA1-201ENST00000344337 LINC00472Q9H8W2 130 aa4.71□□□□□ -1.66
KPNA1-201ENST00000344337 SPANXA2-OT1Q8N9U9 137 aa4.7□□□□□ -1.66
KPNA1-201ENST00000344337 CMYA5Q8N3K9 4069 aa4.7□□□□□ -1.66
KPNA1-201ENST00000344337 Q5W150 140 aa4.69□□□□□ -1.66
KPNA1-201ENST00000344337 SPRR1AP35321 89 aa4.69□□□□□ -1.66
KPNA1-201ENST00000344337 DNAH7Q8WXX0 4024 aa4.69□□□□□ -1.66
KPNA1-201ENST00000344337 Q75L30 129 aa4.68□□□□□ -1.66
KPNA1-201ENST00000344337 LINC00304Q8N9R0 145 aa4.67□□□□□ -1.66
KPNA1-201ENST00000344337 SPATA8Q6RVD6 105 aa4.66□□□□□ -1.66
KPNA1-201ENST00000344337 IGLV5-37A0A075B6J1 123 aa4.66□□□□□ -1.66
KPNA1-201ENST00000344337 KRTAP4-16G5E9R7 235 aaPredicted RBP4.66□□□□□ -1.66
KPNA1-201ENST00000344337 MEGF8Q7Z7M0 2845 aa4.65□□□□□ -1.67
KPNA1-201ENST00000344337 DNAH10Q8IVF4 4471 aa4.65□□□□□ -1.67
KPNA1-201ENST00000344337 KRTAP10-2P60368 255 aa4.63□□□□□ -1.67
KPNA1-201ENST00000344337 LINC01558Q9Y6Z2 57 aa4.63□□□□□ -1.67
KPNA1-201ENST00000344337 WWC2-AS2Q96NR7 200 aa4.61□□□□□ -1.67
KPNA1-201ENST00000344337 A0A1B0GU33 70 aa4.6□□□□□ -1.67
KPNA1-201ENST00000344337 KRTAP29-1A8MX34 341 aaPredicted RBP4.6□□□□□ -1.67
KPNA1-201ENST00000344337 ZCCHC13Q8WW36 166 aaKnown RBP4.6□□□□□ -1.67
KPNA1-201ENST00000344337 DNAH9Q9NYC9 4486 aa4.57□□□□□ -1.68
KPNA1-201ENST00000344337 KRTAP10-1P60331 282 aa4.54□□□□□ -1.68
KPNA1-201ENST00000344337 DNAH1Q9P2D7 4330 aa4.54□□□□□ -1.68
KPNA1-201ENST00000344337 FRAS1Q86XX4 4008 aa4.52□□□□□ -1.69
KPNA1-201ENST00000344337 A6NN06 94 aa4.51□□□□□ -1.69
KPNA1-201ENST00000344337 PLAC8Q9NZF1 115 aa4.49□□□□□ -1.69
KPNA1-201ENST00000344337 COX6B2Q6YFQ2 88 aa4.48□□□□□ -1.69
KPNA1-201ENST00000344337 SPRR1BP22528 89 aa4.47□□□□□ -1.69
KPNA1-201ENST00000344337 Q6ZR54 194 aa4.47□□□□□ -1.69
KPNA1-201ENST00000344337 DMAC1Q96GE9 116 aa4.45□□□□□ -1.7
KPNA1-201ENST00000344337 LCE6AA0A183 80 aa4.42□□□□□ -1.7
KPNA1-201ENST00000344337 C10orf95Q9H7T3 257 aa4.42□□□□□ -1.7
KPNA1-201ENST00000344337 KRTAP13-2Q52LG2 175 aa4.41□□□□□ -1.7
KPNA1-201ENST00000344337 J3QL48 77 aa4.4□□□□□ -1.71
KPNA1-201ENST00000344337 H1FX-AS1Q4G0G2 97 aa4.39□□□□□ -1.71
KPNA1-201ENST00000344337 LINC00483Q53H64 154 aa4.38□□□□□ -1.71
KPNA1-201ENST00000344337 S4R3F8 94 aa4.38□□□□□ -1.71
KPNA1-201ENST00000344337 NDUFAF8A1L188 74 aa4.38□□□□□ -1.71
KPNA1-201ENST00000344337 Q6ZRN7 208 aaPredicted RBP4.38□□□□□ -1.71
KPNA1-201ENST00000344337 CAMK2N1Q7Z7J9 78 aa4.38□□□□□ -1.71
KPNA1-201ENST00000344337 Q6ZSA8 131 aa4.38□□□□□ -1.71
KPNA1-201ENST00000344337 DNAH3Q8TD57 4116 aa4.37□□□□□ -1.71
KPNA1-201ENST00000344337 FAT2Q9NYQ8 4349 aa4.35□□□□□ -1.71
KPNA1-201ENST00000344337 RPL37P61927 97 aaKnown RBP4.35□□□□□ -1.71
KPNA1-201ENST00000344337 ROMO1P60602 79 aa4.34□□□□□ -1.71
KPNA1-201ENST00000344337 KMT2AQ03164 3969 aa4.34□□□□□ -1.71
KPNA1-201ENST00000344337 KRTAP13-1Q8IUC0 172 aa4.34□□□□□ -1.71
KPNA1-201ENST00000344337 R4GN34 69 aa4.32□□□□□ -1.72
KPNA1-201ENST00000344337 KRTAP25-1Q3LHN0 102 aa4.32□□□□□ -1.72
KPNA1-201ENST00000344337 LUZP6Q538Z0 58 aa4.32□□□□□ -1.72
KPNA1-201ENST00000344337 M0QZ58 72 aa4.31□□□□□ -1.72
KPNA1-201ENST00000344337 DNAH2Q9P225 4427 aa4.3□□□□□ -1.72
KPNA1-201ENST00000344337 A8MUU9 505 aa4.3□□□□□ -1.72
KPNA1-201ENST00000344337 HECTD4Q9Y4D8 3996 aa4.29□□□□□ -1.72
KPNA1-201ENST00000344337 DNAH6Q9C0G6 4158 aa4.29□□□□□ -1.72
KPNA1-201ENST00000344337 Q5VSD8 79 aa4.28□□□□□ -1.72
KPNA1-201ENST00000344337 H0YAA0 97 aa4.27□□□□□ -1.73
KPNA1-201ENST00000344337 M0R2T5 61 aa4.27□□□□□ -1.73
KPNA1-201ENST00000344337 HUWE1Q7Z6Z7 4374 aaKnown RBP4.26□□□□□ -1.73
KPNA1-201ENST00000344337 PLECQ15149 4684 aaKnown RBP4.26□□□□□ -1.73
KPNA1-201ENST00000344337 DNHD1Q96M86 4753 aa4.23□□□□□ -1.73
KPNA1-201ENST00000344337 STARD9Q9P2P6 4700 aa4.23□□□□□ -1.73
KPNA1-201ENST00000344337 VPS13DQ5THJ4 4388 aa4.23□□□□□ -1.73
KPNA1-201ENST00000344337 PRKDCP78527 4128 aaKnown RBP4.22□□□□□ -1.73
KPNA1-201ENST00000344337 HYDINQ4G0P3 5121 aa4.22□□□□□ -1.73
KPNA1-201ENST00000344337 DNAH17Q9UFH2 4485 aa4.22□□□□□ -1.73
KPNA1-201ENST00000344337 DNAH8Q96JB1 4490 aa4.21□□□□□ -1.74
KPNA1-201ENST00000344337 ALMS1Q8TCU4 4167 aa4.19□□□□□ -1.74
KPNA1-201ENST00000344337 P0C880 135 aa4.16□□□□□ -1.74
KPNA1-201ENST00000344337 KRTAP1-4P0C5Y4 121 aa4.15□□□□□ -1.74
KPNA1-201ENST00000344337 KRTAP16-1A8MUX0 517 aa4.15□□□□□ -1.74
KPNA1-201ENST00000344337 A0A1B0GVY2 172 aa4.14□□□□□ -1.75
KPNA1-201ENST00000344337 KRTAP10-8P60410 259 aa4.13□□□□□ -1.75
KPNA1-201ENST00000344337 ASB16-AS1Q495Z4 193 aa4.12□□□□□ -1.75
KPNA1-201ENST00000344337 PKHD1P08F94 4074 aa4.08□□□□□ -1.76
KPNA1-201ENST00000344337 DYNC2H1Q8NCM8 4307 aaKnown RBP4.07□□□□□ -1.76
KPNA1-201ENST00000344337 C20orf166-AS1Q96NR2 134 aa4.07□□□□□ -1.76
KPNA1-201ENST00000344337 DNAH11Q96DT5 4516 aa4.06□□□□□ -1.76
KPNA1-201ENST00000344337 KRTAP13-3Q3SY46 172 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms