RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 APLNQ9ULZ1 77 aa10.48□□□□□ -0.73
PRKCD-201ENST00000330452 A0A087WSZ3 146 aa10.47□□□□□ -0.73
PRKCD-201ENST00000330452 SPATA8Q6RVD6 105 aa10.45□□□□□ -0.74
PRKCD-201ENST00000330452 IGHV6-1A0A0B4J1U7 121 aa10.41□□□□□ -0.74
PRKCD-201ENST00000330452 ROMO1P60602 79 aa10.41□□□□□ -0.74
PRKCD-201ENST00000330452 DYNC2H1Q8NCM8 4307 aaKnown RBP10.4□□□□□ -0.74
PRKCD-201ENST00000330452 A8MWP4 228 aa10.39□□□□□ -0.75
PRKCD-201ENST00000330452 IGLV8-61A0A075B6I0 122 aa10.37□□□□□ -0.75
PRKCD-201ENST00000330452 C14orf177Q52M58 125 aa10.36□□□□□ -0.75
PRKCD-201ENST00000330452 MMP24-AS1A0A0U1RRL7 71 aa10.35□□□□□ -0.75
PRKCD-201ENST00000330452 DNAH2Q9P225 4427 aa10.35□□□□□ -0.75
PRKCD-201ENST00000330452 VPS13DQ5THJ4 4388 aa10.34□□□□□ -0.75
PRKCD-201ENST00000330452 PANO1I0J062 215 aa10.34□□□□□ -0.75
PRKCD-201ENST00000330452 MIR22HGQ0VDD5 57 aa10.32□□□□□ -0.76
PRKCD-201ENST00000330452 ALMS1Q8TCU4 4167 aa10.31□□□□□ -0.76
PRKCD-201ENST00000330452 NBDYA0A0U1RRE5 68 aa10.3□□□□□ -0.76
PRKCD-201ENST00000330452 LINC00472Q9H8W2 130 aa10.3□□□□□ -0.76
PRKCD-201ENST00000330452 ZNF861PO60384 105 aa10.28□□□□□ -0.76
PRKCD-201ENST00000330452 SPRR1BP22528 89 aa10.28□□□□□ -0.76
PRKCD-201ENST00000330452 TP53AIP1Q9HCN2 124 aa10.28□□□□□ -0.76
PRKCD-201ENST00000330452 A0A1B0GU69 56 aa10.28□□□□□ -0.76
PRKCD-201ENST00000330452 NUPR2A6NF83 97 aa10.28□□□□□ -0.76
PRKCD-201ENST00000330452 Q6ZRN7 208 aaPredicted RBP10.27□□□□□ -0.77
PRKCD-201ENST00000330452 A0A0A0MQY5 61 aa10.26□□□□□ -0.77
PRKCD-201ENST00000330452 UQCR11O14957 56 aa10.23□□□□□ -0.77
PRKCD-201ENST00000330452 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.23□□□□□ -0.77
PRKCD-201ENST00000330452 HECTD4Q9Y4D8 3996 aa10.22□□□□□ -0.77
PRKCD-201ENST00000330452 KRTAP13-1Q8IUC0 172 aa10.21□□□□□ -0.78
PRKCD-201ENST00000330452 HYDINQ4G0P3 5121 aa10.2□□□□□ -0.78
PRKCD-201ENST00000330452 LY6G6CO95867 125 aa10.2□□□□□ -0.78
PRKCD-201ENST00000330452 DNAH6Q9C0G6 4158 aa10.2□□□□□ -0.78
PRKCD-201ENST00000330452 FRAS1Q86XX4 4008 aa10.2□□□□□ -0.78
PRKCD-201ENST00000330452 P0C880 135 aa10.19□□□□□ -0.78
PRKCD-201ENST00000330452 KRTAP25-1Q3LHN0 102 aa10.18□□□□□ -0.78
PRKCD-201ENST00000330452 IGLV9-49A0A0B4J1Y8 123 aa10.17□□□□□ -0.78
PRKCD-201ENST00000330452 SPACA4Q8TDM5 124 aa10.17□□□□□ -0.78
PRKCD-201ENST00000330452 ACYP2P14621 99 aa10.16□□□□□ -0.78
PRKCD-201ENST00000330452 A0A087WTM6 91 aa10.12□□□□□ -0.79
PRKCD-201ENST00000330452 ANAPC11Q9NYG5 84 aa10.09□□□□□ -0.79
PRKCD-201ENST00000330452 C8orf17Q9NRJ1 99 aa10.08□□□□□ -0.8
PRKCD-201ENST00000330452 Q96NJ1 140 aa10.07□□□□□ -0.8
PRKCD-201ENST00000330452 PSORS1C2Q9UIG4 136 aa10.07□□□□□ -0.8
PRKCD-201ENST00000330452 DNAH11Q96DT5 4516 aa10.07□□□□□ -0.8
PRKCD-201ENST00000330452 DNAH17Q9UFH2 4485 aa10.06□□□□□ -0.8
PRKCD-201ENST00000330452 DMAC1Q96GE9 116 aa10.05□□□□□ -0.8
PRKCD-201ENST00000330452 DNAH8Q96JB1 4490 aa10.05□□□□□ -0.8
PRKCD-201ENST00000330452 LINC00483Q53H64 154 aa10.04□□□□□ -0.8
PRKCD-201ENST00000330452 IGLV5-52A0A0A0MRZ9 124 aa10.03□□□□□ -0.8
PRKCD-201ENST00000330452 WWC2-AS2Q96NR7 200 aa10.02□□□□□ -0.8
PRKCD-201ENST00000330452 A8MUU9 505 aa10.01□□□□□ -0.81
PRKCD-201ENST00000330452 MRPL34Q9BQ48 92 aaKnown RBP9.99□□□□□ -0.81
PRKCD-201ENST00000330452 DNAH5Q8TE73 4624 aa9.98□□□□□ -0.81
PRKCD-201ENST00000330452 KRTAP10-2P60368 255 aa9.97□□□□□ -0.81
PRKCD-201ENST00000330452 Q5W150 140 aa9.94□□□□□ -0.82
PRKCD-201ENST00000330452 NOTCH2NLQ7Z3S9 236 aa9.94□□□□□ -0.82
PRKCD-201ENST00000330452 PKHD1P08F94 4074 aa9.93□□□□□ -0.82
PRKCD-201ENST00000330452 A0A1B0GVX0 72 aa9.92□□□□□ -0.82
PRKCD-201ENST00000330452 KRTAP13-3Q3SY46 172 aa9.91□□□□□ -0.82
PRKCD-201ENST00000330452 FAT2Q9NYQ8 4349 aa9.91□□□□□ -0.82
PRKCD-201ENST00000330452 IGLV7-43P04211 117 aa9.91□□□□□ -0.82
PRKCD-201ENST00000330452 LINC00304Q8N9R0 145 aa9.89□□□□□ -0.83
PRKCD-201ENST00000330452 LRP1BQ9NZR2 4599 aa9.89□□□□□ -0.83
PRKCD-201ENST00000330452 CDK2AP2O75956 126 aa9.89□□□□□ -0.83
PRKCD-201ENST00000330452 PKD1P98161 4303 aa9.87□□□□□ -0.83
PRKCD-201ENST00000330452 SPINK6Q6UWN8 80 aa9.87□□□□□ -0.83
PRKCD-201ENST00000330452 CIRBP-AS1Q8TBR5 109 aa9.84□□□□□ -0.83
PRKCD-201ENST00000330452 SACSQ9NZJ4 4579 aa9.84□□□□□ -0.83
PRKCD-201ENST00000330452 KMT2CQ8NEZ4 4911 aaKnown RBP9.8□□□□□ -0.84
PRKCD-201ENST00000330452 KRTAP16-1A8MUX0 517 aa9.79□□□□□ -0.84
PRKCD-201ENST00000330452 KRTAP10-1P60331 282 aa9.79□□□□□ -0.84
PRKCD-201ENST00000330452 CRIPTQ9P021 101 aa9.79□□□□□ -0.84
PRKCD-201ENST00000330452 NDUFAF8A1L188 74 aa9.78□□□□□ -0.84
PRKCD-201ENST00000330452 C20orf166-AS1Q96NR2 134 aa9.75□□□□□ -0.85
PRKCD-201ENST00000330452 FLG2Q5D862 2391 aaPredicted RBP9.75□□□□□ -0.85
PRKCD-201ENST00000330452 VPS13BQ7Z7G8 4022 aa9.74□□□□□ -0.85
PRKCD-201ENST00000330452 KRTAP21-3Q3LHN1 58 aa9.72□□□□□ -0.85
PRKCD-201ENST00000330452 H0YAA0 97 aa9.71□□□□□ -0.86
PRKCD-201ENST00000330452 SSBP3-AS1Q7Z2R9 100 aa9.69□□□□□ -0.86
PRKCD-201ENST00000330452 KRTAP13-2Q52LG2 175 aa9.66□□□□□ -0.86
PRKCD-201ENST00000330452 SPINT4Q6UDR6 99 aa9.66□□□□□ -0.86
PRKCD-201ENST00000330452 FAT1Q14517 4588 aa9.65□□□□□ -0.87
PRKCD-201ENST00000330452 Q6ZSA8 131 aa9.64□□□□□ -0.87
PRKCD-201ENST00000330452 SMR3BP02814 79 aaPredicted RBP9.61□□□□□ -0.87
PRKCD-201ENST00000330452 IGKV2-30P06310 120 aa9.6□□□□□ -0.87
PRKCD-201ENST00000330452 DYNC1H1Q14204 4646 aaKnown RBP9.6□□□□□ -0.87
PRKCD-201ENST00000330452 KRTAP15-1Q3LI76 137 aa9.58□□□□□ -0.88
PRKCD-201ENST00000330452 RYR2Q92736 4967 aa9.55□□□□□ -0.88
PRKCD-201ENST00000330452 KRTAP1-4P0C5Y4 121 aa9.53□□□□□ -0.88
PRKCD-201ENST00000330452 FAM229AH3BQW9 127 aa9.52□□□□□ -0.88
PRKCD-201ENST00000330452 SPINK1P00995 79 aa9.51□□□□□ -0.89
PRKCD-201ENST00000330452 RYR3Q15413 4870 aa9.48□□□□□ -0.89
PRKCD-201ENST00000330452 IGKV2D-30A0A075B6S6 120 aa9.44□□□□□ -0.9
PRKCD-201ENST00000330452 APOBP04114 4563 aaKnown RBP9.43□□□□□ -0.9
PRKCD-201ENST00000330452 A0A1B0GU33 70 aa9.43□□□□□ -0.9
PRKCD-201ENST00000330452 TYMSOSQ8TAI1 123 aa9.41□□□□□ -0.9
PRKCD-201ENST00000330452 TPRXLQ17RH7 258 aa9.4□□□□□ -0.9
PRKCD-201ENST00000330452 LUZP6Q538Z0 58 aa9.39□□□□□ -0.91
PRKCD-201ENST00000330452 K7ERS5 55 aa9.38□□□□□ -0.91
PRKCD-201ENST00000330452 H1FX-AS1Q4G0G2 97 aa9.36□□□□□ -0.91
PRKCD-201ENST00000330452 A0A1B0GVY2 172 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms