RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 A8MWP4 228 aa6.3□□□□□ -1.4
SF3B2-201ENST00000322535 KRTAP4-16G5E9R7 235 aaPredicted RBP6.29□□□□□ -1.4
SF3B2-201ENST00000322535 DYNC2H1Q8NCM8 4307 aaKnown RBP6.28□□□□□ -1.4
SF3B2-201ENST00000322535 ZNF861PO60384 105 aa6.28□□□□□ -1.4
SF3B2-201ENST00000322535 VPS13DQ5THJ4 4388 aa6.28□□□□□ -1.4
SF3B2-201ENST00000322535 IGKV2-24A0A0C4DH68 120 aa6.27□□□□□ -1.41
SF3B2-201ENST00000322535 HYDINQ4G0P3 5121 aa6.27□□□□□ -1.41
SF3B2-201ENST00000322535 MMP24-AS1A0A0U1RRL7 71 aa6.26□□□□□ -1.41
SF3B2-201ENST00000322535 DNAH2Q9P225 4427 aa6.26□□□□□ -1.41
SF3B2-201ENST00000322535 NUPR2A6NF83 97 aa6.26□□□□□ -1.41
SF3B2-201ENST00000322535 LY6G6CO95867 125 aa6.25□□□□□ -1.41
SF3B2-201ENST00000322535 A0A1B0GU69 56 aa6.24□□□□□ -1.41
SF3B2-201ENST00000322535 KRTAP25-1Q3LHN0 102 aa6.24□□□□□ -1.41
SF3B2-201ENST00000322535 SPRR1AP35321 89 aa6.23□□□□□ -1.41
SF3B2-201ENST00000322535 FRAS1Q86XX4 4008 aa6.23□□□□□ -1.41
SF3B2-201ENST00000322535 IGLV8-61A0A075B6I0 122 aa6.22□□□□□ -1.41
SF3B2-201ENST00000322535 KRTAP7-1Q8IUC3 87 aa6.22□□□□□ -1.41
SF3B2-201ENST00000322535 LINC00472Q9H8W2 130 aa6.22□□□□□ -1.41
SF3B2-201ENST00000322535 KRTAP21-3Q3LHN1 58 aa6.22□□□□□ -1.41
SF3B2-201ENST00000322535 NBDYA0A0U1RRE5 68 aa6.21□□□□□ -1.42
SF3B2-201ENST00000322535 FLG2Q5D862 2391 aaPredicted RBP6.18□□□□□ -1.42
SF3B2-201ENST00000322535 A8MUU9 505 aa6.18□□□□□ -1.42
SF3B2-201ENST00000322535 CHTF8P0CG12 524 aa6.18□□□□□ -1.42
SF3B2-201ENST00000322535 DNAH6Q9C0G6 4158 aa6.18□□□□□ -1.42
SF3B2-201ENST00000322535 TP53AIP1Q9HCN2 124 aa6.17□□□□□ -1.42
SF3B2-201ENST00000322535 ALMS1Q8TCU4 4167 aa6.17□□□□□ -1.42
SF3B2-201ENST00000322535 UQCR11O14957 56 aa6.17□□□□□ -1.42
SF3B2-201ENST00000322535 LINC00483Q53H64 154 aa6.17□□□□□ -1.42
SF3B2-201ENST00000322535 IGLV5-52A0A0A0MRZ9 124 aa6.16□□□□□ -1.42
SF3B2-201ENST00000322535 HECTD4Q9Y4D8 3996 aa6.16□□□□□ -1.42
SF3B2-201ENST00000322535 KRTAP16-1A8MUX0 517 aa6.15□□□□□ -1.42
SF3B2-201ENST00000322535 WWC2-AS2Q96NR7 200 aa6.15□□□□□ -1.42
SF3B2-201ENST00000322535 NDUFAF8A1L188 74 aa6.14□□□□□ -1.43
SF3B2-201ENST00000322535 ACYP2P14621 99 aa6.14□□□□□ -1.43
SF3B2-201ENST00000322535 C8orf17Q9NRJ1 99 aa6.14□□□□□ -1.43
SF3B2-201ENST00000322535 KMT2CQ8NEZ4 4911 aaKnown RBP6.13□□□□□ -1.43
SF3B2-201ENST00000322535 Q6ZRN7 208 aaPredicted RBP6.13□□□□□ -1.43
SF3B2-201ENST00000322535 CRIPTQ9P021 101 aa6.13□□□□□ -1.43
SF3B2-201ENST00000322535 PANO1I0J062 215 aa6.12□□□□□ -1.43
SF3B2-201ENST00000322535 IGLV9-49A0A0B4J1Y8 123 aa6.12□□□□□ -1.43
SF3B2-201ENST00000322535 PLA2G2DQ9UNK4 145 aa6.12□□□□□ -1.43
SF3B2-201ENST00000322535 NOTCH2NLQ7Z3S9 236 aa6.11□□□□□ -1.43
SF3B2-201ENST00000322535 CDK2AP2O75956 126 aa6.11□□□□□ -1.43
SF3B2-201ENST00000322535 PKHD1P08F94 4074 aa6.09□□□□□ -1.44
SF3B2-201ENST00000322535 Q5W150 140 aa6.09□□□□□ -1.44
SF3B2-201ENST00000322535 TLX1NBP0CAT3 122 aa6.08□□□□□ -1.44
SF3B2-201ENST00000322535 MRPL34Q9BQ48 92 aaKnown RBP6.08□□□□□ -1.44
SF3B2-201ENST00000322535 SACSQ9NZJ4 4579 aa6.08□□□□□ -1.44
SF3B2-201ENST00000322535 DNAH11Q96DT5 4516 aa6.08□□□□□ -1.44
SF3B2-201ENST00000322535 A0A087WTM6 91 aa6.08□□□□□ -1.44
SF3B2-201ENST00000322535 C20orf166-AS1Q96NR2 134 aa6.07□□□□□ -1.44
SF3B2-201ENST00000322535 SPINK6Q6UWN8 80 aa6.06□□□□□ -1.44
SF3B2-201ENST00000322535 KRTAP11-1Q8IUC1 163 aa6.06□□□□□ -1.44
SF3B2-201ENST00000322535 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.05□□□□□ -1.44
SF3B2-201ENST00000322535 A0A1B0GVX0 72 aa6.05□□□□□ -1.44
SF3B2-201ENST00000322535 DNAH17Q9UFH2 4485 aa6.04□□□□□ -1.44
SF3B2-201ENST00000322535 KRTAP10-2P60368 255 aa6.04□□□□□ -1.44
SF3B2-201ENST00000322535 LINC00304Q8N9R0 145 aa6.04□□□□□ -1.44
SF3B2-201ENST00000322535 Q96NJ1 140 aa6.04□□□□□ -1.44
SF3B2-201ENST00000322535 FAT2Q9NYQ8 4349 aa6.03□□□□□ -1.44
SF3B2-201ENST00000322535 DMAC1Q96GE9 116 aa6.03□□□□□ -1.44
SF3B2-201ENST00000322535 DNAH5Q8TE73 4624 aa6.03□□□□□ -1.44
SF3B2-201ENST00000322535 SPINK1P00995 79 aa6.01□□□□□ -1.45
SF3B2-201ENST00000322535 C14orf177Q52M58 125 aa6.01□□□□□ -1.45
SF3B2-201ENST00000322535 DNAH8Q96JB1 4490 aa6.01□□□□□ -1.45
SF3B2-201ENST00000322535 PKD1P98161 4303 aa5.99□□□□□ -1.45
SF3B2-201ENST00000322535 SPINT4Q6UDR6 99 aa5.98□□□□□ -1.45
SF3B2-201ENST00000322535 IGLV7-43P04211 117 aa5.96□□□□□ -1.45
SF3B2-201ENST00000322535 ANAPC11Q9NYG5 84 aa5.95□□□□□ -1.46
SF3B2-201ENST00000322535 RYR3Q15413 4870 aa5.95□□□□□ -1.46
SF3B2-201ENST00000322535 LRP1BQ9NZR2 4599 aa5.95□□□□□ -1.46
SF3B2-201ENST00000322535 SSBP3-AS1Q7Z2R9 100 aa5.94□□□□□ -1.46
SF3B2-201ENST00000322535 SPRR1BP22528 89 aa5.94□□□□□ -1.46
SF3B2-201ENST00000322535 SPACA4Q8TDM5 124 aa5.93□□□□□ -1.46
SF3B2-201ENST00000322535 RYR2Q92736 4967 aa5.93□□□□□ -1.46
SF3B2-201ENST00000322535 LUZP6Q538Z0 58 aa5.92□□□□□ -1.46
SF3B2-201ENST00000322535 KRTAP10-1P60331 282 aa5.92□□□□□ -1.46
SF3B2-201ENST00000322535 KRTAP15-1Q3LI76 137 aa5.91□□□□□ -1.46
SF3B2-201ENST00000322535 CIRBP-AS1Q8TBR5 109 aa5.9□□□□□ -1.47
SF3B2-201ENST00000322535 IGKV2D-30A0A075B6S6 120 aa5.89□□□□□ -1.47
SF3B2-201ENST00000322535 IGKV2-30P06310 120 aa5.89□□□□□ -1.47
SF3B2-201ENST00000322535 VPS13BQ7Z7G8 4022 aa5.89□□□□□ -1.47
SF3B2-201ENST00000322535 KRTAP13-3Q3SY46 172 aa5.89□□□□□ -1.47
SF3B2-201ENST00000322535 H0YAA0 97 aa5.88□□□□□ -1.47
SF3B2-201ENST00000322535 PSORS1C2Q9UIG4 136 aa5.88□□□□□ -1.47
SF3B2-201ENST00000322535 FAT1Q14517 4588 aa5.86□□□□□ -1.47
SF3B2-201ENST00000322535 SMR3BP02814 79 aaPredicted RBP5.86□□□□□ -1.47
SF3B2-201ENST00000322535 DYNC1H1Q14204 4646 aaKnown RBP5.85□□□□□ -1.47
SF3B2-201ENST00000322535 DMBT1Q9UGM3 2413 aaPredicted RBP5.85□□□□□ -1.47
SF3B2-201ENST00000322535 Q6ZSA8 131 aa5.82□□□□□ -1.48
SF3B2-201ENST00000322535 Q8N1X5 172 aa5.81□□□□□ -1.48
SF3B2-201ENST00000322535 FAM229AH3BQW9 127 aa5.8□□□□□ -1.48
SF3B2-201ENST00000322535 TPRXLQ17RH7 258 aa5.78□□□□□ -1.48
SF3B2-201ENST00000322535 KRTAP13-1Q8IUC0 172 aa5.77□□□□□ -1.49
SF3B2-201ENST00000322535 EPPK1P58107 5090 aaKnown RBP5.76□□□□□ -1.49
SF3B2-201ENST00000322535 APOBP04114 4563 aaKnown RBP5.76□□□□□ -1.49
SF3B2-201ENST00000322535 TYMSOSQ8TAI1 123 aa5.75□□□□□ -1.49
SF3B2-201ENST00000322535 A0A1B0GU33 70 aa5.74□□□□□ -1.49
SF3B2-201ENST00000322535 A0A1B0GVY2 172 aa5.74□□□□□ -1.49
SF3B2-201ENST00000322535 K7ERS5 55 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms