RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 Q6ZR54 194 aa6.52□□□□□ -1.37
MSRB3-201ENST00000308259 LUZP6Q538Z0 58 aa6.52□□□□□ -1.37
MSRB3-201ENST00000308259 KRTAP7-1Q8IUC3 87 aa6.51□□□□□ -1.37
MSRB3-201ENST00000308259 NDUFAF8A1L188 74 aa6.51□□□□□ -1.37
MSRB3-201ENST00000308259 COL7A1Q02388 2944 aa6.5□□□□□ -1.37
MSRB3-201ENST00000308259 KRTAP29-1A8MX34 341 aaPredicted RBP6.46□□□□□ -1.37
MSRB3-201ENST00000308259 ASB16-AS1Q495Z4 193 aa6.46□□□□□ -1.38
MSRB3-201ENST00000308259 HUWE1Q7Z6Z7 4374 aaKnown RBP6.45□□□□□ -1.38
MSRB3-201ENST00000308259 IGKV2D-30A0A075B6S6 120 aa6.45□□□□□ -1.38
MSRB3-201ENST00000308259 KRTAP4-16G5E9R7 235 aaPredicted RBP6.45□□□□□ -1.38
MSRB3-201ENST00000308259 IGKV2-30P06310 120 aa6.45□□□□□ -1.38
MSRB3-201ENST00000308259 DNAH1Q9P2D7 4330 aa6.44□□□□□ -1.38
MSRB3-201ENST00000308259 IGLV5-37A0A075B6J1 123 aa6.44□□□□□ -1.38
MSRB3-201ENST00000308259 TNP2Q05952 138 aa6.44□□□□□ -1.38
MSRB3-201ENST00000308259 C8orf17Q9NRJ1 99 aa6.44□□□□□ -1.38
MSRB3-201ENST00000308259 RTL8CO15255 209 aa6.43□□□□□ -1.38
MSRB3-201ENST00000308259 MMP24-AS1A0A0U1RRL7 71 aa6.43□□□□□ -1.38
MSRB3-201ENST00000308259 CHTF8P0CG12 524 aa6.42□□□□□ -1.38
MSRB3-201ENST00000308259 MRPL34Q9BQ48 92 aaKnown RBP6.42□□□□□ -1.38
MSRB3-201ENST00000308259 DNAH9Q9NYC9 4486 aa6.41□□□□□ -1.38
MSRB3-201ENST00000308259 DNAH3Q8TD57 4116 aa6.41□□□□□ -1.38
MSRB3-201ENST00000308259 KRTAP1-5Q9BYS1 174 aa6.41□□□□□ -1.38
MSRB3-201ENST00000308259 DNAH7Q8WXX0 4024 aa6.4□□□□□ -1.38
MSRB3-201ENST00000308259 TLX1NBP0CAT3 122 aa6.4□□□□□ -1.38
MSRB3-201ENST00000308259 FAM229AH3BQW9 127 aa6.39□□□□□ -1.39
MSRB3-201ENST00000308259 SPRR1AP35321 89 aa6.39□□□□□ -1.39
MSRB3-201ENST00000308259 A0A087WTM6 91 aa6.39□□□□□ -1.39
MSRB3-201ENST00000308259 KRTAP11-1Q8IUC1 163 aa6.38□□□□□ -1.39
MSRB3-201ENST00000308259 KRTAP25-1Q3LHN0 102 aa6.38□□□□□ -1.39
MSRB3-201ENST00000308259 SPATA8Q6RVD6 105 aa6.38□□□□□ -1.39
MSRB3-201ENST00000308259 DMAC1Q96GE9 116 aa6.37□□□□□ -1.39
MSRB3-201ENST00000308259 PLA2G2DQ9UNK4 145 aa6.36□□□□□ -1.39
MSRB3-201ENST00000308259 LINC00472Q9H8W2 130 aa6.34□□□□□ -1.39
MSRB3-201ENST00000308259 PLAC8Q9NZF1 115 aa6.33□□□□□ -1.4
MSRB3-201ENST00000308259 A0A1B0GVX0 72 aa6.33□□□□□ -1.4
MSRB3-201ENST00000308259 PANO1I0J062 215 aa6.29□□□□□ -1.4
MSRB3-201ENST00000308259 PLECQ15149 4684 aaKnown RBP6.28□□□□□ -1.4
MSRB3-201ENST00000308259 C20orf166-AS1Q96NR2 134 aa6.28□□□□□ -1.4
MSRB3-201ENST00000308259 A8MUU9 505 aa6.27□□□□□ -1.41
MSRB3-201ENST00000308259 CIRBP-AS1Q8TBR5 109 aa6.27□□□□□ -1.41
MSRB3-201ENST00000308259 ZNF861PO60384 105 aa6.26□□□□□ -1.41
MSRB3-201ENST00000308259 FRAS1Q86XX4 4008 aa6.25□□□□□ -1.41
MSRB3-201ENST00000308259 LINC00483Q53H64 154 aa6.23□□□□□ -1.41
MSRB3-201ENST00000308259 ANAPC11Q9NYG5 84 aa6.22□□□□□ -1.41
MSRB3-201ENST00000308259 TGP01266 2768 aa6.21□□□□□ -1.42
MSRB3-201ENST00000308259 A0A0D9SG42 100 aa6.2□□□□□ -1.42
MSRB3-201ENST00000308259 IGLV7-43P04211 117 aa6.2□□□□□ -1.42
MSRB3-201ENST00000308259 Q5W150 140 aa6.2□□□□□ -1.42
MSRB3-201ENST00000308259 SEC61BP60468 96 aaKnown RBP6.19□□□□□ -1.42
MSRB3-201ENST00000308259 A0A087X002 238 aa6.19□□□□□ -1.42
MSRB3-201ENST00000308259 A0A1B0GU33 70 aa6.19□□□□□ -1.42
MSRB3-201ENST00000308259 NOTCH2NLQ7Z3S9 236 aa6.19□□□□□ -1.42
MSRB3-201ENST00000308259 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.19□□□□□ -1.42
MSRB3-201ENST00000308259 Q8N1X5 172 aa6.17□□□□□ -1.42
MSRB3-201ENST00000308259 KMT2AQ03164 3969 aa6.17□□□□□ -1.42
MSRB3-201ENST00000308259 STARD9Q9P2P6 4700 aa6.17□□□□□ -1.42
MSRB3-201ENST00000308259 J3QL48 77 aa6.13□□□□□ -1.43
MSRB3-201ENST00000308259 HECTD4Q9Y4D8 3996 aa6.12□□□□□ -1.43
MSRB3-201ENST00000308259 TYMSOSQ8TAI1 123 aa6.12□□□□□ -1.43
MSRB3-201ENST00000308259 PRKDCP78527 4128 aaKnown RBP6.12□□□□□ -1.43
MSRB3-201ENST00000308259 SPRR1BP22528 89 aa6.11□□□□□ -1.43
MSRB3-201ENST00000308259 DNAH8Q96JB1 4490 aa6.1□□□□□ -1.43
MSRB3-201ENST00000308259 LINC00304Q8N9R0 145 aa6.1□□□□□ -1.43
MSRB3-201ENST00000308259 SPACA4Q8TDM5 124 aa6.1□□□□□ -1.43
MSRB3-201ENST00000308259 Q6ZRN7 208 aaPredicted RBP6.1□□□□□ -1.43
MSRB3-201ENST00000308259 MEGF8Q7Z7M0 2845 aa6.1□□□□□ -1.43
MSRB3-201ENST00000308259 DNAH2Q9P225 4427 aa6.09□□□□□ -1.43
MSRB3-201ENST00000308259 KRTAP13-1Q8IUC0 172 aa6.09□□□□□ -1.43
MSRB3-201ENST00000308259 SMR3BP02814 79 aaPredicted RBP6.09□□□□□ -1.43
MSRB3-201ENST00000308259 PSORS1C2Q9UIG4 136 aa6.09□□□□□ -1.43
MSRB3-201ENST00000308259 Q96NJ1 140 aa6.09□□□□□ -1.44
MSRB3-201ENST00000308259 DYNC2H1Q8NCM8 4307 aaKnown RBP6.08□□□□□ -1.44
MSRB3-201ENST00000308259 P0C880 135 aa6.08□□□□□ -1.44
MSRB3-201ENST00000308259 FBN3Q75N90 2809 aa6.08□□□□□ -1.44
MSRB3-201ENST00000308259 DNAH17Q9UFH2 4485 aa6.06□□□□□ -1.44
MSRB3-201ENST00000308259 VPS13DQ5THJ4 4388 aa6.06□□□□□ -1.44
MSRB3-201ENST00000308259 DNAH6Q9C0G6 4158 aa6.05□□□□□ -1.44
MSRB3-201ENST00000308259 KRTAP10-1P60331 282 aa6□□□□□ -1.45
MSRB3-201ENST00000308259 KRTAP10-2P60368 255 aa6□□□□□ -1.45
MSRB3-201ENST00000308259 DNAH11Q96DT5 4516 aa5.97□□□□□ -1.45
MSRB3-201ENST00000308259 DNHD1Q96M86 4753 aa5.97□□□□□ -1.45
MSRB3-201ENST00000308259 ALMS1Q8TCU4 4167 aa5.95□□□□□ -1.46
MSRB3-201ENST00000308259 H0YAA0 97 aa5.95□□□□□ -1.46
MSRB3-201ENST00000308259 Q6ZSA8 131 aa5.95□□□□□ -1.46
MSRB3-201ENST00000308259 H1FX-AS1Q4G0G2 97 aa5.93□□□□□ -1.46
MSRB3-201ENST00000308259 C10orf95Q9H7T3 257 aa5.93□□□□□ -1.46
MSRB3-201ENST00000308259 RPL37P61927 97 aaKnown RBP5.93□□□□□ -1.46
MSRB3-201ENST00000308259 Q5VSD8 79 aa5.93□□□□□ -1.46
MSRB3-201ENST00000308259 DNAH5Q8TE73 4624 aa5.9□□□□□ -1.46
MSRB3-201ENST00000308259 LRP1BQ9NZR2 4599 aa5.9□□□□□ -1.47
MSRB3-201ENST00000308259 HYDINQ4G0P3 5121 aa5.84□□□□□ -1.47
MSRB3-201ENST00000308259 CAMK2N1Q7Z7J9 78 aa5.83□□□□□ -1.48
MSRB3-201ENST00000308259 VPS13BQ7Z7G8 4022 aa5.82□□□□□ -1.48
MSRB3-201ENST00000308259 KRTAP13-2Q52LG2 175 aa5.82□□□□□ -1.48
MSRB3-201ENST00000308259 KRTAP13-3Q3SY46 172 aa5.81□□□□□ -1.48
MSRB3-201ENST00000308259 FAT2Q9NYQ8 4349 aa5.81□□□□□ -1.48
MSRB3-201ENST00000308259 COX6B2Q6YFQ2 88 aa5.76□□□□□ -1.49
MSRB3-201ENST00000308259 PKHD1P08F94 4074 aa5.75□□□□□ -1.49
MSRB3-201ENST00000308259 PKD1P98161 4303 aa5.75□□□□□ -1.49
MSRB3-201ENST00000308259 C9orf92A6NGG3 77 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms