RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 J3QKU1 62 aa6.56□□□□□ -1.36
SNX20-201ENST00000300590 PLA2G1BP04054 148 aaKnown RBP6.56□□□□□ -1.36
SNX20-201ENST00000300590 ACYP2P14621 99 aa6.55□□□□□ -1.36
SNX20-201ENST00000300590 MIR22HGQ0VDD5 57 aa6.53□□□□□ -1.36
SNX20-201ENST00000300590 ZNF706Q9Y5V0 76 aaPredicted RBP6.53□□□□□ -1.36
SNX20-201ENST00000300590 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.51□□□□□ -1.37
SNX20-201ENST00000300590 C14orf177Q52M58 125 aa6.5□□□□□ -1.37
SNX20-201ENST00000300590 CIRBP-AS1Q8TBR5 109 aa6.5□□□□□ -1.37
SNX20-201ENST00000300590 KRTAP13-1Q8IUC0 172 aa6.5□□□□□ -1.37
SNX20-201ENST00000300590 DNAH1Q9P2D7 4330 aa6.5□□□□□ -1.37
SNX20-201ENST00000300590 UQCR11O14957 56 aa6.48□□□□□ -1.37
SNX20-201ENST00000300590 WWC2-AS2Q96NR7 200 aa6.48□□□□□ -1.37
SNX20-201ENST00000300590 DNAH9Q9NYC9 4486 aa6.48□□□□□ -1.37
SNX20-201ENST00000300590 KRTAP24-1Q3LI83 254 aa6.47□□□□□ -1.37
SNX20-201ENST00000300590 C1orf134Q5TEV5 83 aa6.47□□□□□ -1.37
SNX20-201ENST00000300590 FLG2Q5D862 2391 aaPredicted RBP6.46□□□□□ -1.38
SNX20-201ENST00000300590 RTL8CO15255 209 aa6.45□□□□□ -1.38
SNX20-201ENST00000300590 PSORS1C2Q9UIG4 136 aa6.45□□□□□ -1.38
SNX20-201ENST00000300590 SPINK1P00995 79 aa6.43□□□□□ -1.38
SNX20-201ENST00000300590 SPATA8Q6RVD6 105 aa6.42□□□□□ -1.38
SNX20-201ENST00000300590 DMAC1Q96GE9 116 aa6.42□□□□□ -1.38
SNX20-201ENST00000300590 IGKV2D-30A0A075B6S6 120 aa6.41□□□□□ -1.38
SNX20-201ENST00000300590 IGKV2-30P06310 120 aa6.41□□□□□ -1.38
SNX20-201ENST00000300590 KRTAP13-3Q3SY46 172 aa6.41□□□□□ -1.38
SNX20-201ENST00000300590 LINC00483Q53H64 154 aa6.41□□□□□ -1.38
SNX20-201ENST00000300590 TGP01266 2768 aa6.4□□□□□ -1.38
SNX20-201ENST00000300590 SPACA4Q8TDM5 124 aa6.39□□□□□ -1.39
SNX20-201ENST00000300590 HUWE1Q7Z6Z7 4374 aaKnown RBP6.39□□□□□ -1.39
SNX20-201ENST00000300590 APLNQ9ULZ1 77 aa6.38□□□□□ -1.39
SNX20-201ENST00000300590 FRAS1Q86XX4 4008 aa6.38□□□□□ -1.39
SNX20-201ENST00000300590 ZNF861PO60384 105 aa6.38□□□□□ -1.39
SNX20-201ENST00000300590 NBDYA0A0U1RRE5 68 aa6.37□□□□□ -1.39
SNX20-201ENST00000300590 IGLV5-52A0A0A0MRZ9 124 aa6.37□□□□□ -1.39
SNX20-201ENST00000300590 DNAH7Q8WXX0 4024 aa6.36□□□□□ -1.39
SNX20-201ENST00000300590 FBN3Q75N90 2809 aa6.34□□□□□ -1.39
SNX20-201ENST00000300590 FAM229AH3BQW9 127 aa6.34□□□□□ -1.39
SNX20-201ENST00000300590 CMYA5Q8N3K9 4069 aa6.34□□□□□ -1.39
SNX20-201ENST00000300590 CRIPTQ9P021 101 aa6.33□□□□□ -1.4
SNX20-201ENST00000300590 MEGF8Q7Z7M0 2845 aa6.32□□□□□ -1.4
SNX20-201ENST00000300590 ALMS1Q8TCU4 4167 aa6.31□□□□□ -1.4
SNX20-201ENST00000300590 Q6ZRN7 208 aaPredicted RBP6.31□□□□□ -1.4
SNX20-201ENST00000300590 A0A087WTM6 91 aa6.29□□□□□ -1.4
SNX20-201ENST00000300590 Q8N1X5 172 aa6.29□□□□□ -1.4
SNX20-201ENST00000300590 ROMO1P60602 79 aa6.28□□□□□ -1.4
SNX20-201ENST00000300590 DNAH8Q96JB1 4490 aa6.28□□□□□ -1.4
SNX20-201ENST00000300590 IGLV7-43P04211 117 aa6.26□□□□□ -1.41
SNX20-201ENST00000300590 DNAH3Q8TD57 4116 aa6.24□□□□□ -1.41
SNX20-201ENST00000300590 PLECQ15149 4684 aaKnown RBP6.23□□□□□ -1.41
SNX20-201ENST00000300590 DMBT1Q9UGM3 2413 aaPredicted RBP6.23□□□□□ -1.41
SNX20-201ENST00000300590 KRTAP25-1Q3LHN0 102 aa6.23□□□□□ -1.41
SNX20-201ENST00000300590 SSBP3-AS1Q7Z2R9 100 aa6.22□□□□□ -1.41
SNX20-201ENST00000300590 DNAH17Q9UFH2 4485 aa6.17□□□□□ -1.42
SNX20-201ENST00000300590 KRTAP16-1A8MUX0 517 aa6.16□□□□□ -1.42
SNX20-201ENST00000300590 KRTAP13-2Q52LG2 175 aa6.16□□□□□ -1.42
SNX20-201ENST00000300590 SPINT4Q6UDR6 99 aa6.16□□□□□ -1.42
SNX20-201ENST00000300590 Q6ZSA8 131 aa6.15□□□□□ -1.42
SNX20-201ENST00000300590 A8MUU9 505 aa6.15□□□□□ -1.43
SNX20-201ENST00000300590 H0YAA0 97 aa6.15□□□□□ -1.43
SNX20-201ENST00000300590 NUPR2A6NF83 97 aa6.14□□□□□ -1.43
SNX20-201ENST00000300590 TYMSOSQ8TAI1 123 aa6.14□□□□□ -1.43
SNX20-201ENST00000300590 LINC00304Q8N9R0 145 aa6.14□□□□□ -1.43
SNX20-201ENST00000300590 HECTD4Q9Y4D8 3996 aa6.13□□□□□ -1.43
SNX20-201ENST00000300590 K7ERS5 55 aa6.12□□□□□ -1.43
SNX20-201ENST00000300590 KMT2AQ03164 3969 aa6.11□□□□□ -1.43
SNX20-201ENST00000300590 LY6G6CO95867 125 aa6.1□□□□□ -1.43
SNX20-201ENST00000300590 A0A1B0GU33 70 aa6.09□□□□□ -1.43
SNX20-201ENST00000300590 P0C880 135 aa6.07□□□□□ -1.44
SNX20-201ENST00000300590 STARD9Q9P2P6 4700 aa6.07□□□□□ -1.44
SNX20-201ENST00000300590 KRTAP10-2P60368 255 aa6.05□□□□□ -1.44
SNX20-201ENST00000300590 NDUFAF8A1L188 74 aa6.03□□□□□ -1.44
SNX20-201ENST00000300590 C9orf92A6NGG3 77 aa6.03□□□□□ -1.44
SNX20-201ENST00000300590 DNAH6Q9C0G6 4158 aa6.03□□□□□ -1.44
SNX20-201ENST00000300590 VPS13DQ5THJ4 4388 aa6.02□□□□□ -1.45
SNX20-201ENST00000300590 DNAH2Q9P225 4427 aa6.01□□□□□ -1.45
SNX20-201ENST00000300590 H1FX-AS1Q4G0G2 97 aa6□□□□□ -1.45
SNX20-201ENST00000300590 DNAH11Q96DT5 4516 aa6□□□□□ -1.45
SNX20-201ENST00000300590 KRTAP1-4P0C5Y4 121 aa5.97□□□□□ -1.45
SNX20-201ENST00000300590 LRP1BQ9NZR2 4599 aa5.96□□□□□ -1.46
SNX20-201ENST00000300590 DYNC2H1Q8NCM8 4307 aaKnown RBP5.96□□□□□ -1.46
SNX20-201ENST00000300590 KRTAP10-1P60331 282 aa5.95□□□□□ -1.46
SNX20-201ENST00000300590 KRTAP3-1Q9BYR8 98 aa5.95□□□□□ -1.46
SNX20-201ENST00000300590 A0A0D9SG42 100 aa5.94□□□□□ -1.46
SNX20-201ENST00000300590 COX6B2Q6YFQ2 88 aa5.92□□□□□ -1.46
SNX20-201ENST00000300590 A0A0A0MQY5 61 aa5.92□□□□□ -1.46
SNX20-201ENST00000300590 C20orf166-AS1Q96NR2 134 aa5.89□□□□□ -1.47
SNX20-201ENST00000300590 C10orf95Q9H7T3 257 aa5.89□□□□□ -1.47
SNX20-201ENST00000300590 PRKDCP78527 4128 aaKnown RBP5.86□□□□□ -1.47
SNX20-201ENST00000300590 DNAH5Q8TE73 4624 aa5.86□□□□□ -1.47
SNX20-201ENST00000300590 VPS13BQ7Z7G8 4022 aa5.85□□□□□ -1.47
SNX20-201ENST00000300590 SMR3BP02814 79 aaPredicted RBP5.82□□□□□ -1.48
SNX20-201ENST00000300590 TPRXLQ17RH7 258 aa5.81□□□□□ -1.48
SNX20-201ENST00000300590 RPL37P61927 97 aaKnown RBP5.81□□□□□ -1.48
SNX20-201ENST00000300590 KRTAP13-4Q3LI77 160 aa5.77□□□□□ -1.48
SNX20-201ENST00000300590 FAT2Q9NYQ8 4349 aa5.76□□□□□ -1.49
SNX20-201ENST00000300590 DNHD1Q96M86 4753 aa5.75□□□□□ -1.49
SNX20-201ENST00000300590 KRTAP10-6P60371 365 aaPredicted RBP5.71□□□□□ -1.5
SNX20-201ENST00000300590 KRTAP15-1Q3LI76 137 aa5.69□□□□□ -1.5
SNX20-201ENST00000300590 HYDINQ4G0P3 5121 aa5.69□□□□□ -1.5
SNX20-201ENST00000300590 LUZP6Q538Z0 58 aa5.68□□□□□ -1.5
SNX20-201ENST00000300590 PKD1P98161 4303 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms