RNA–Protein interactions for RNA: ENST00000292729.12

USP41-201, Transcript of ubiquitin specific peptidase 41, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene USP41, Length 920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-201ENST00000292729 LCE2BO14633 110 aa5.38□□□□□ -1.55
USP41-201ENST00000292729 Q6ZQY7 126 aa5.38□□□□□ -1.55
USP41-201ENST00000292729 ACYP1P07311 99 aa5.37□□□□□ -1.55
USP41-201ENST00000292729 PDE6GP18545 87 aa5.37□□□□□ -1.55
USP41-201ENST00000292729 ATP11AUNQ6ZP68 121 aa5.36□□□□□ -1.55
USP41-201ENST00000292729 SMIM29Q86T20 159 aa5.36□□□□□ -1.55
USP41-201ENST00000292729 IGLV5-48A0A075B6I7 105 aa5.35□□□□□ -1.55
USP41-201ENST00000292729 MT2AP02795 61 aa5.35□□□□□ -1.55
USP41-201ENST00000292729 LOC110117498A0A087WWA1 95 aa5.33□□□□□ -1.56
USP41-201ENST00000292729 RBM3P98179 157 aaKnown RBP5.33□□□□□ -1.56
USP41-201ENST00000292729 VPS25Q9BRG1 176 aa5.33□□□□□ -1.56
USP41-201ENST00000292729 KRTAP6-3Q3LI67 103 aa5.32□□□□□ -1.56
USP41-201ENST00000292729 Q75L30 129 aa5.32□□□□□ -1.56
USP41-201ENST00000292729 NDUFV3P56181 108 aaKnown RBP5.31□□□□□ -1.56
USP41-201ENST00000292729 DSCR8Q96T75 97 aa5.31□□□□□ -1.56
USP41-201ENST00000292729 KRTAP9-3Q9BYQ3 159 aa5.31□□□□□ -1.56
USP41-201ENST00000292729 MT1FP04733 61 aa5.3□□□□□ -1.56
USP41-201ENST00000292729 C14orf132Q9NPU4 83 aa5.3□□□□□ -1.56
USP41-201ENST00000292729 TRBV7-4A0A0J9YYF1 115 aa5.29□□□□□ -1.56
USP41-201ENST00000292729 A0A1B0GW54 56 aa5.29□□□□□ -1.56
USP41-201ENST00000292729 CCKP06307 115 aa5.29□□□□□ -1.56
USP41-201ENST00000292729 KRTAP19-6Q3LI70 58 aa5.29□□□□□ -1.56
USP41-201ENST00000292729 KRTAP10-10P60014 251 aa5.28□□□□□ -1.56
USP41-201ENST00000292729 Q6ZQT0 140 aa5.28□□□□□ -1.56
USP41-201ENST00000292729 DEFB105AQ8NG35 78 aa5.28□□□□□ -1.56
USP41-201ENST00000292729 F8WEM9 126 aa5.27□□□□□ -1.57
USP41-201ENST00000292729 ATP5EP2Q5VTU8 51 aa5.25□□□□□ -1.57
USP41-201ENST00000292729 LINC00643Q86TS7 51 aa5.25□□□□□ -1.57
USP41-201ENST00000292729 SIGMAR1Q99720 223 aa5.25□□□□□ -1.57
USP41-201ENST00000292729 A0A0G2JQZ4 141 aa5.24□□□□□ -1.57
USP41-201ENST00000292729 NEBP20929 6669 aa5.23□□□□□ -1.57
USP41-201ENST00000292729 Q6JHZ5 121 aa5.23□□□□□ -1.57
USP41-201ENST00000292729 UBL5Q9BZL1 73 aa5.23□□□□□ -1.57
USP41-201ENST00000292729 IMUPQ9GZP8 106 aa5.23□□□□□ -1.57
USP41-201ENST00000292729 SCGB1A1P11684 91 aa5.22□□□□□ -1.57
USP41-201ENST00000292729 A0A1B0GV72 72 aa5.21□□□□□ -1.58
USP41-201ENST00000292729 TRBV7-7A0A0K0K1E9 115 aa5.2□□□□□ -1.58
USP41-201ENST00000292729 FAM236DA0A1B0GTK5 79 aa5.2□□□□□ -1.58
USP41-201ENST00000292729 FAM236CP0DP71 79 aa5.2□□□□□ -1.58
USP41-201ENST00000292729 C20orf166-AS1Q96NR2 134 aa5.2□□□□□ -1.58
USP41-201ENST00000292729 Q96NJ1 140 aa5.19□□□□□ -1.58
USP41-201ENST00000292729 MT-ATP8P03928 68 aa5.18□□□□□ -1.58
USP41-201ENST00000292729 CXCL6P80162 114 aa5.17□□□□□ -1.58
USP41-201ENST00000292729 A8MUU9 505 aa5.16□□□□□ -1.58
USP41-201ENST00000292729 IGFL1Q6UW32 110 aa5.16□□□□□ -1.58
USP41-201ENST00000292729 Q6ZVQ6 151 aa5.16□□□□□ -1.58
USP41-201ENST00000292729 A0A1W2PNM2 257 aa5.15□□□□□ -1.59
USP41-201ENST00000292729 RBM12B-AS1Q9P1G2 102 aa5.15□□□□□ -1.59
USP41-201ENST00000292729 NREPQ16612 68 aa5.13□□□□□ -1.59
USP41-201ENST00000292729 SS18L2Q9UHA2 77 aa5.12□□□□□ -1.59
USP41-201ENST00000292729 KRTAP20-1Q3LI63 56 aa5.11□□□□□ -1.59
USP41-201ENST00000292729 MPLKIPQ8TAP9 179 aa5.11□□□□□ -1.59
USP41-201ENST00000292729 IGKV3D-7A0A0C4DH55 119 aa5.09□□□□□ -1.59
USP41-201ENST00000292729 BPY2O14599 106 aa5.09□□□□□ -1.59
USP41-201ENST00000292729 A0A087WSZ3 146 aa5.08□□□□□ -1.6
USP41-201ENST00000292729 HRES1P13985 223 aa5.08□□□□□ -1.6
USP41-201ENST00000292729 J3KT08 172 aa5.07□□□□□ -1.6
USP41-201ENST00000292729 HIST1H4AP62805 103 aaKnown RBP5.07□□□□□ -1.6
USP41-201ENST00000292729 FAM236AA0A1B0GUQ0 79 aa5.06□□□□□ -1.6
USP41-201ENST00000292729 FAM236BA0A1B0GV22 79 aa5.06□□□□□ -1.6
USP41-201ENST00000292729 ATOX1O00244 68 aa5.06□□□□□ -1.6
USP41-201ENST00000292729 MUC12Q9UKN1 5478 aa5.06□□□□□ -1.6
USP41-201ENST00000292729 KRTAP16-1A8MUX0 517 aa5.05□□□□□ -1.6
USP41-201ENST00000292729 PCP4P48539 62 aa5.05□□□□□ -1.6
USP41-201ENST00000292729 A8MWP4 228 aa5.04□□□□□ -1.6
USP41-201ENST00000292729 SMIM20Q8N5G0 67 aa5.03□□□□□ -1.6
USP41-201ENST00000292729 LINC00472Q9H8W2 130 aa5.03□□□□□ -1.6
USP41-201ENST00000292729 IGKV4-1P06312 121 aa5.02□□□□□ -1.61
USP41-201ENST00000292729 NOTCH2NLQ7Z3S9 236 aa5.02□□□□□ -1.61
USP41-201ENST00000292729 ANAPC13Q9BS18 74 aa5.02□□□□□ -1.61
USP41-201ENST00000292729 A0A087WVE0 104 aa5.01□□□□□ -1.61
USP41-201ENST00000292729 DSCR10P59022 87 aa5.01□□□□□ -1.61
USP41-201ENST00000292729 NDUFB1O75438 58 aa5□□□□□ -1.61
USP41-201ENST00000292729 Q8N9P0 234 aaPredicted RBP4.99□□□□□ -1.61
USP41-201ENST00000292729 K7EQZ3 153 aa4.98□□□□□ -1.61
USP41-201ENST00000292729 LINC00313P59037 77 aa4.98□□□□□ -1.61
USP41-201ENST00000292729 PRR15Q8IV56 129 aa4.98□□□□□ -1.61
USP41-201ENST00000292729 HCG22E2RYF7 251 aa4.97□□□□□ -1.61
USP41-201ENST00000292729 UQCRQO14949 82 aa4.96□□□□□ -1.62
USP41-201ENST00000292729 SERP2Q8N6R1 65 aa4.96□□□□□ -1.62
USP41-201ENST00000292729 TRAV7A0A075B6U4 112 aa4.95□□□□□ -1.62
USP41-201ENST00000292729 COX7CP15954 63 aa4.95□□□□□ -1.62
USP41-201ENST00000292729 Q8N9L7 120 aa4.95□□□□□ -1.62
USP41-201ENST00000292729 A0A1B0GVX0 72 aa4.93□□□□□ -1.62
USP41-201ENST00000292729 C8orf87E5RJ46 101 aa4.93□□□□□ -1.62
USP41-201ENST00000292729 DEFB116Q30KQ4 102 aa4.92□□□□□ -1.62
USP41-201ENST00000292729 MMP24-AS1A0A0U1RRL7 71 aa4.9□□□□□ -1.63
USP41-201ENST00000292729 KRTAP5-9P26371 169 aa4.9□□□□□ -1.63
USP41-201ENST00000292729 CASC2Q6XLA1 102 aa4.9□□□□□ -1.63
USP41-201ENST00000292729 OCR1Q9BZK8 76 aa4.9□□□□□ -1.63
USP41-201ENST00000292729 C8orf17Q9NRJ1 99 aa4.9□□□□□ -1.63
USP41-201ENST00000292729 hDV103S1A0JD37 113 aa4.89□□□□□ -1.63
USP41-201ENST00000292729 A6NN06 94 aa4.89□□□□□ -1.63
USP41-201ENST00000292729 TMEM254Q8TBM7 123 aa4.89□□□□□ -1.63
USP41-201ENST00000292729 KRTAP2-3P0C7H8 128 aa4.88□□□□□ -1.63
USP41-201ENST00000292729 KRTAP2-4Q9BYR9 128 aa4.88□□□□□ -1.63
USP41-201ENST00000292729 SPINK7P58062 85 aa4.87□□□□□ -1.63
USP41-201ENST00000292729 WFDC13Q8IUB5 93 aa4.87□□□□□ -1.63
USP41-201ENST00000292729 TP53AIP1Q9HCN2 124 aa4.87□□□□□ -1.63
USP41-201ENST00000292729 IGHV6-1A0A0B4J1U7 121 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms