RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 LCE6AA0A183 80 aa5.36□□□□□ -1.55
SEC16A-201ENST00000277537 IGKV2D-30A0A075B6S6 120 aa5.36□□□□□ -1.55
SEC16A-201ENST00000277537 IGKV2-30P06310 120 aa5.36□□□□□ -1.55
SEC16A-201ENST00000277537 TP53AIP1Q9HCN2 124 aa5.36□□□□□ -1.55
SEC16A-201ENST00000277537 A0A087X002 238 aa5.35□□□□□ -1.55
SEC16A-201ENST00000277537 LINC00483Q53H64 154 aa5.34□□□□□ -1.55
SEC16A-201ENST00000277537 LINC00304Q8N9R0 145 aa5.34□□□□□ -1.55
SEC16A-201ENST00000277537 Q96NJ1 140 aa5.34□□□□□ -1.56
SEC16A-201ENST00000277537 DNHD1Q96M86 4753 aa5.33□□□□□ -1.56
SEC16A-201ENST00000277537 CMYA5Q8N3K9 4069 aa5.33□□□□□ -1.56
SEC16A-201ENST00000277537 MMP24-AS1A0A0U1RRL7 71 aa5.32□□□□□ -1.56
SEC16A-201ENST00000277537 A8MU10 97 aa5.32□□□□□ -1.56
SEC16A-201ENST00000277537 C9orf92A6NGG3 77 aa5.31□□□□□ -1.56
SEC16A-201ENST00000277537 SPINK1P00995 79 aa5.3□□□□□ -1.56
SEC16A-201ENST00000277537 DNAH10Q8IVF4 4471 aa5.29□□□□□ -1.56
SEC16A-201ENST00000277537 PLECQ15149 4684 aaKnown RBP5.29□□□□□ -1.56
SEC16A-201ENST00000277537 COA5Q86WW8 74 aa5.29□□□□□ -1.56
SEC16A-201ENST00000277537 NOTCH2NLQ7Z3S9 236 aa5.29□□□□□ -1.56
SEC16A-201ENST00000277537 C8orf87E5RJ46 101 aa5.28□□□□□ -1.56
SEC16A-201ENST00000277537 H3BPC8 53 aa5.28□□□□□ -1.56
SEC16A-201ENST00000277537 PRKDCP78527 4128 aaKnown RBP5.27□□□□□ -1.57
SEC16A-201ENST00000277537 DNAH3Q8TD57 4116 aa5.26□□□□□ -1.57
SEC16A-201ENST00000277537 KRTAP13-2Q52LG2 175 aa5.25□□□□□ -1.57
SEC16A-201ENST00000277537 KRTAP29-1A8MX34 341 aaPredicted RBP5.25□□□□□ -1.57
SEC16A-201ENST00000277537 Q1T7F1 81 aa5.24□□□□□ -1.57
SEC16A-201ENST00000277537 LYSTQ99698 3801 aa5.24□□□□□ -1.57
SEC16A-201ENST00000277537 LOC101927531A0A1B0GV80 90 aa5.23□□□□□ -1.57
SEC16A-201ENST00000277537 Q6ZSA8 131 aa5.23□□□□□ -1.57
SEC16A-201ENST00000277537 STARD9Q9P2P6 4700 aa5.21□□□□□ -1.57
SEC16A-201ENST00000277537 Q8N9P0 234 aaPredicted RBP5.21□□□□□ -1.58
SEC16A-201ENST00000277537 Q5VV11 94 aa5.21□□□□□ -1.58
SEC16A-201ENST00000277537 C7orf65Q6ZTY9 151 aa5.2□□□□□ -1.58
SEC16A-201ENST00000277537 CYP4F30PQ9H0H9 118 aa5.18□□□□□ -1.58
SEC16A-201ENST00000277537 ACYP2P14621 99 aa5.17□□□□□ -1.58
SEC16A-201ENST00000277537 Q5VSD8 79 aa5.17□□□□□ -1.58
SEC16A-201ENST00000277537 ZCCHC13Q8WW36 166 aaKnown RBP5.17□□□□□ -1.58
SEC16A-201ENST00000277537 DNAH1Q9P2D7 4330 aa5.17□□□□□ -1.58
SEC16A-201ENST00000277537 Q5W150 140 aa5.16□□□□□ -1.58
SEC16A-201ENST00000277537 KRTAP1-4P0C5Y4 121 aa5.15□□□□□ -1.59
SEC16A-201ENST00000277537 SPANXA2-OT1Q8N9U9 137 aa5.14□□□□□ -1.59
SEC16A-201ENST00000277537 Q8N1X5 172 aa5.14□□□□□ -1.59
SEC16A-201ENST00000277537 KTN1-AS1Q86SY8 53 aa5.13□□□□□ -1.59
SEC16A-201ENST00000277537 KMT2AQ03164 3969 aa5.13□□□□□ -1.59
SEC16A-201ENST00000277537 SPINK7P58062 85 aa5.13□□□□□ -1.59
SEC16A-201ENST00000277537 ATP11AUNQ6ZP68 121 aa5.13□□□□□ -1.59
SEC16A-201ENST00000277537 HRES1P13985 223 aa5.13□□□□□ -1.59
SEC16A-201ENST00000277537 IGLV7-46A0A075B6I9 117 aa5.12□□□□□ -1.59
SEC16A-201ENST00000277537 A0A1B0GU69 56 aa5.12□□□□□ -1.59
SEC16A-201ENST00000277537 LCA10Q71F78 164 aa5.12□□□□□ -1.59
SEC16A-201ENST00000277537 PRAC1Q96KF2 57 aa5.12□□□□□ -1.59
SEC16A-201ENST00000277537 RBM12B-AS1Q9P1G2 102 aa5.12□□□□□ -1.59
SEC16A-201ENST00000277537 DNAH7Q8WXX0 4024 aa5.11□□□□□ -1.59
SEC16A-201ENST00000277537 VPS13DQ5THJ4 4388 aa5.09□□□□□ -1.59
SEC16A-201ENST00000277537 DNAH11Q96DT5 4516 aa5.09□□□□□ -1.6
SEC16A-201ENST00000277537 ASB16-AS1Q495Z4 193 aa5.08□□□□□ -1.6
SEC16A-201ENST00000277537 CDC42SE1Q9NRR8 79 aa5.08□□□□□ -1.6
SEC16A-201ENST00000277537 Q75L30 129 aa5.06□□□□□ -1.6
SEC16A-201ENST00000277537 A0A1B0GVY2 172 aa5.04□□□□□ -1.6
SEC16A-201ENST00000277537 SEC61BP60468 96 aaKnown RBP5.03□□□□□ -1.6
SEC16A-201ENST00000277537 LINC01558Q9Y6Z2 57 aa5.01□□□□□ -1.61
SEC16A-201ENST00000277537 DYNC2H1Q8NCM8 4307 aaKnown RBP5.01□□□□□ -1.61
SEC16A-201ENST00000277537 ADM2Q7Z4H4 148 aa5□□□□□ -1.61
SEC16A-201ENST00000277537 MIR22HGQ0VDD5 57 aa4.99□□□□□ -1.61
SEC16A-201ENST00000277537 UQCR11O14957 56 aa4.98□□□□□ -1.61
SEC16A-201ENST00000277537 DNAH5Q8TE73 4624 aa4.97□□□□□ -1.61
SEC16A-201ENST00000277537 DNAH2Q9P225 4427 aa4.97□□□□□ -1.61
SEC16A-201ENST00000277537 DNAH17Q9UFH2 4485 aa4.96□□□□□ -1.61
SEC16A-201ENST00000277537 RPS29P62273 56 aaKnown RBP4.96□□□□□ -1.61
SEC16A-201ENST00000277537 LRP1BQ9NZR2 4599 aa4.95□□□□□ -1.62
SEC16A-201ENST00000277537 A6NN06 94 aa4.94□□□□□ -1.62
SEC16A-201ENST00000277537 DMAC1Q96GE9 116 aa4.94□□□□□ -1.62
SEC16A-201ENST00000277537 FAT1Q14517 4588 aa4.93□□□□□ -1.62
SEC16A-201ENST00000277537 DNAH6Q9C0G6 4158 aa4.93□□□□□ -1.62
SEC16A-201ENST00000277537 KRTAP16-1A8MUX0 517 aa4.92□□□□□ -1.62
SEC16A-201ENST00000277537 CRIPTQ9P021 101 aa4.91□□□□□ -1.62
SEC16A-201ENST00000277537 HYDINQ4G0P3 5121 aa4.91□□□□□ -1.62
SEC16A-201ENST00000277537 FRAS1Q86XX4 4008 aa4.91□□□□□ -1.62
SEC16A-201ENST00000277537 DNAH8Q96JB1 4490 aa4.9□□□□□ -1.62
SEC16A-201ENST00000277537 CSAG1Q6PB30 78 aa4.89□□□□□ -1.63
SEC16A-201ENST00000277537 K7ERS5 55 aa4.89□□□□□ -1.63
SEC16A-201ENST00000277537 HECTD4Q9Y4D8 3996 aa4.87□□□□□ -1.63
SEC16A-201ENST00000277537 ALMS1Q8TCU4 4167 aa4.87□□□□□ -1.63
SEC16A-201ENST00000277537 LINC01554Q52M75 96 aa4.87□□□□□ -1.63
SEC16A-201ENST00000277537 DYNC1H1Q14204 4646 aaKnown RBP4.87□□□□□ -1.63
SEC16A-201ENST00000277537 A8MUU9 505 aa4.86□□□□□ -1.63
SEC16A-201ENST00000277537 C20orf166-AS1Q96NR2 134 aa4.86□□□□□ -1.63
SEC16A-201ENST00000277537 KRTAP13-3Q3SY46 172 aa4.85□□□□□ -1.63
SEC16A-201ENST00000277537 A0A0D9SG42 100 aa4.84□□□□□ -1.63
SEC16A-201ENST00000277537 KRTAP10-8P60410 259 aa4.83□□□□□ -1.64
SEC16A-201ENST00000277537 KRTAP10-4P60372 401 aaPredicted RBP4.82□□□□□ -1.64
SEC16A-201ENST00000277537 COX6B2Q6YFQ2 88 aa4.82□□□□□ -1.64
SEC16A-201ENST00000277537 VPS13BQ7Z7G8 4022 aa4.81□□□□□ -1.64
SEC16A-201ENST00000277537 PKHD1P08F94 4074 aa4.81□□□□□ -1.64
SEC16A-201ENST00000277537 SACSQ9NZJ4 4579 aa4.81□□□□□ -1.64
SEC16A-201ENST00000277537 RPL37P61927 97 aaKnown RBP4.8□□□□□ -1.64
SEC16A-201ENST00000277537 XP32Q5T750 250 aa4.79□□□□□ -1.64
SEC16A-201ENST00000277537 A0A1B0GU33 70 aa4.77□□□□□ -1.65
SEC16A-201ENST00000277537 S4R3F8 94 aa4.77□□□□□ -1.65
SEC16A-201ENST00000277537 KMT2CQ8NEZ4 4911 aaKnown RBP4.76□□□□□ -1.65
SEC16A-201ENST00000277537 SPATA8Q6RVD6 105 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 256 ms