RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 C8orf17Q9NRJ1 99 aa9.45□□□□□ -0.9
CTDSP1-201ENST00000273062 KRTAP11-1Q8IUC1 163 aa9.44□□□□□ -0.9
CTDSP1-201ENST00000273062 STARD9Q9P2P6 4700 aa9.43□□□□□ -0.9
CTDSP1-201ENST00000273062 A0A087X002 238 aa9.43□□□□□ -0.9
CTDSP1-201ENST00000273062 NOTCH2NLQ7Z3S9 236 aa9.43□□□□□ -0.9
CTDSP1-201ENST00000273062 IGHV6-1A0A0B4J1U7 121 aa9.43□□□□□ -0.9
CTDSP1-201ENST00000273062 DNHD1Q96M86 4753 aa9.42□□□□□ -0.9
CTDSP1-201ENST00000273062 A0A1B0GU69 56 aa9.42□□□□□ -0.9
CTDSP1-201ENST00000273062 ZNF706Q9Y5V0 76 aaPredicted RBP9.42□□□□□ -0.9
CTDSP1-201ENST00000273062 MIR22HGQ0VDD5 57 aa9.41□□□□□ -0.9
CTDSP1-201ENST00000273062 C1orf134Q5TEV5 83 aa9.41□□□□□ -0.9
CTDSP1-201ENST00000273062 MEGF8Q7Z7M0 2845 aa9.39□□□□□ -0.91
CTDSP1-201ENST00000273062 Q5W150 140 aa9.39□□□□□ -0.91
CTDSP1-201ENST00000273062 CHTF8P0CG12 524 aa9.35□□□□□ -0.91
CTDSP1-201ENST00000273062 ACYP2P14621 99 aa9.35□□□□□ -0.91
CTDSP1-201ENST00000273062 MRPL34Q9BQ48 92 aaKnown RBP9.34□□□□□ -0.91
CTDSP1-201ENST00000273062 ZNF861PO60384 105 aa9.33□□□□□ -0.92
CTDSP1-201ENST00000273062 SPRR1BP22528 89 aa9.33□□□□□ -0.92
CTDSP1-201ENST00000273062 UQCR11O14957 56 aa9.32□□□□□ -0.92
CTDSP1-201ENST00000273062 A0A1B0GVX0 72 aa9.32□□□□□ -0.92
CTDSP1-201ENST00000273062 NBDYA0A0U1RRE5 68 aa9.3□□□□□ -0.92
CTDSP1-201ENST00000273062 KMT2AQ03164 3969 aa9.29□□□□□ -0.92
CTDSP1-201ENST00000273062 IGLV9-49A0A0B4J1Y8 123 aa9.29□□□□□ -0.92
CTDSP1-201ENST00000273062 NUPR2A6NF83 97 aa9.29□□□□□ -0.92
CTDSP1-201ENST00000273062 KRTAP13-3Q3SY46 172 aa9.28□□□□□ -0.92
CTDSP1-201ENST00000273062 ROMO1P60602 79 aa9.27□□□□□ -0.93
CTDSP1-201ENST00000273062 Q6ZRN7 208 aaPredicted RBP9.26□□□□□ -0.93
CTDSP1-201ENST00000273062 DMAC1Q96GE9 116 aa9.26□□□□□ -0.93
CTDSP1-201ENST00000273062 PANO1I0J062 215 aa9.26□□□□□ -0.93
CTDSP1-201ENST00000273062 VPS13DQ5THJ4 4388 aa9.25□□□□□ -0.93
CTDSP1-201ENST00000273062 C14orf177Q52M58 125 aa9.21□□□□□ -0.93
CTDSP1-201ENST00000273062 DNAH2Q9P225 4427 aa9.21□□□□□ -0.93
CTDSP1-201ENST00000273062 CDK2AP2O75956 126 aa9.18□□□□□ -0.94
CTDSP1-201ENST00000273062 TGP01266 2768 aa9.18□□□□□ -0.94
CTDSP1-201ENST00000273062 FBN3Q75N90 2809 aa9.18□□□□□ -0.94
CTDSP1-201ENST00000273062 HECTD4Q9Y4D8 3996 aa9.17□□□□□ -0.94
CTDSP1-201ENST00000273062 KRTAP25-1Q3LHN0 102 aa9.16□□□□□ -0.94
CTDSP1-201ENST00000273062 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.16□□□□□ -0.94
CTDSP1-201ENST00000273062 FRAS1Q86XX4 4008 aa9.14□□□□□ -0.95
CTDSP1-201ENST00000273062 FLG2Q5D862 2391 aaPredicted RBP9.14□□□□□ -0.95
CTDSP1-201ENST00000273062 P0C880 135 aa9.14□□□□□ -0.95
CTDSP1-201ENST00000273062 SPINK6Q6UWN8 80 aa9.13□□□□□ -0.95
CTDSP1-201ENST00000273062 A0A087WTM6 91 aa9.13□□□□□ -0.95
CTDSP1-201ENST00000273062 ANAPC11Q9NYG5 84 aa9.1□□□□□ -0.95
CTDSP1-201ENST00000273062 KRTAP21-3Q3LHN1 58 aa9.09□□□□□ -0.95
CTDSP1-201ENST00000273062 IGLV5-52A0A0A0MRZ9 124 aa9.09□□□□□ -0.95
CTDSP1-201ENST00000273062 SPACA4Q8TDM5 124 aa9.09□□□□□ -0.95
CTDSP1-201ENST00000273062 KRTAP13-1Q8IUC0 172 aa9.08□□□□□ -0.96
CTDSP1-201ENST00000273062 IGLV7-43P04211 117 aa9.08□□□□□ -0.96
CTDSP1-201ENST00000273062 CRIPTQ9P021 101 aa9.07□□□□□ -0.96
CTDSP1-201ENST00000273062 A8MUU9 505 aa9.05□□□□□ -0.96
CTDSP1-201ENST00000273062 DNAH17Q9UFH2 4485 aa9.05□□□□□ -0.96
CTDSP1-201ENST00000273062 LINC00304Q8N9R0 145 aa9.04□□□□□ -0.96
CTDSP1-201ENST00000273062 LY6G6CO95867 125 aa9.04□□□□□ -0.96
CTDSP1-201ENST00000273062 DNAH6Q9C0G6 4158 aa9.02□□□□□ -0.96
CTDSP1-201ENST00000273062 DNAH8Q96JB1 4490 aa9.02□□□□□ -0.97
CTDSP1-201ENST00000273062 WWC2-AS2Q96NR7 200 aa9□□□□□ -0.97
CTDSP1-201ENST00000273062 H0YAA0 97 aa8.99□□□□□ -0.97
CTDSP1-201ENST00000273062 HYDINQ4G0P3 5121 aa8.98□□□□□ -0.97
CTDSP1-201ENST00000273062 SPINK1P00995 79 aa8.98□□□□□ -0.97
CTDSP1-201ENST00000273062 IGKV2-30P06310 120 aa8.98□□□□□ -0.97
CTDSP1-201ENST00000273062 PSORS1C2Q9UIG4 136 aa8.96□□□□□ -0.97
CTDSP1-201ENST00000273062 DNAH5Q8TE73 4624 aa8.95□□□□□ -0.98
CTDSP1-201ENST00000273062 LINC00483Q53H64 154 aa8.95□□□□□ -0.98
CTDSP1-201ENST00000273062 Q6ZSA8 131 aa8.93□□□□□ -0.98
CTDSP1-201ENST00000273062 KRTAP10-2P60368 255 aa8.91□□□□□ -0.98
CTDSP1-201ENST00000273062 DNAH11Q96DT5 4516 aa8.91□□□□□ -0.98
CTDSP1-201ENST00000273062 IGKV2D-30A0A075B6S6 120 aa8.9□□□□□ -0.98
CTDSP1-201ENST00000273062 FAM229AH3BQW9 127 aa8.89□□□□□ -0.99
CTDSP1-201ENST00000273062 KRTAP16-1A8MUX0 517 aa8.85□□□□□ -0.99
CTDSP1-201ENST00000273062 FAT2Q9NYQ8 4349 aa8.85□□□□□ -0.99
CTDSP1-201ENST00000273062 PKD1P98161 4303 aa8.83□□□□□ -1
CTDSP1-201ENST00000273062 TYMSOSQ8TAI1 123 aa8.82□□□□□ -1
CTDSP1-201ENST00000273062 CIRBP-AS1Q8TBR5 109 aa8.82□□□□□ -1
CTDSP1-201ENST00000273062 SSBP3-AS1Q7Z2R9 100 aa8.81□□□□□ -1
CTDSP1-201ENST00000273062 Q8N1X5 172 aa8.81□□□□□ -1
CTDSP1-201ENST00000273062 LRP1BQ9NZR2 4599 aa8.79□□□□□ -1
CTDSP1-201ENST00000273062 KRTAP10-1P60331 282 aa8.77□□□□□ -1.01
CTDSP1-201ENST00000273062 NDUFAF8A1L188 74 aa8.75□□□□□ -1.01
CTDSP1-201ENST00000273062 A0A1B0GU33 70 aa8.7□□□□□ -1.02
CTDSP1-201ENST00000273062 PKHD1P08F94 4074 aa8.7□□□□□ -1.02
CTDSP1-201ENST00000273062 A0A0A0MQY5 61 aa8.7□□□□□ -1.02
CTDSP1-201ENST00000273062 SPINT4Q6UDR6 99 aa8.7□□□□□ -1.02
CTDSP1-201ENST00000273062 SACSQ9NZJ4 4579 aa8.68□□□□□ -1.02
CTDSP1-201ENST00000273062 VPS13BQ7Z7G8 4022 aa8.67□□□□□ -1.02
CTDSP1-201ENST00000273062 C20orf166-AS1Q96NR2 134 aa8.65□□□□□ -1.03
CTDSP1-201ENST00000273062 H1FX-AS1Q4G0G2 97 aa8.64□□□□□ -1.03
CTDSP1-201ENST00000273062 TPRXLQ17RH7 258 aa8.62□□□□□ -1.03
CTDSP1-201ENST00000273062 KRTAP13-2Q52LG2 175 aa8.6□□□□□ -1.03
CTDSP1-201ENST00000273062 KRTAP15-1Q3LI76 137 aa8.58□□□□□ -1.04
CTDSP1-201ENST00000273062 C10orf95Q9H7T3 257 aa8.56□□□□□ -1.04
CTDSP1-201ENST00000273062 KRTAP1-4P0C5Y4 121 aa8.53□□□□□ -1.04
CTDSP1-201ENST00000273062 DMBT1Q9UGM3 2413 aaPredicted RBP8.53□□□□□ -1.04
CTDSP1-201ENST00000273062 DYNC1H1Q14204 4646 aaKnown RBP8.53□□□□□ -1.04
CTDSP1-201ENST00000273062 K7ERS5 55 aa8.5□□□□□ -1.05
CTDSP1-201ENST00000273062 KMT2CQ8NEZ4 4911 aaKnown RBP8.49□□□□□ -1.05
CTDSP1-201ENST00000273062 COX6B2Q6YFQ2 88 aa8.49□□□□□ -1.05
CTDSP1-201ENST00000273062 SMR3BP02814 79 aaPredicted RBP8.48□□□□□ -1.05
CTDSP1-201ENST00000273062 RYR2Q92736 4967 aa8.47□□□□□ -1.05
CTDSP1-201ENST00000273062 KRTAP3-1Q9BYR8 98 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms