RNA–Protein interactions for RNA: ENST00000269141.7

CDH2-201, Transcript of cadherin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH2, Length 4,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH2-201ENST00000269141 TLX1NBP0CAT3 122 aa6.99□□□□□ -1.29
CDH2-201ENST00000269141 CNBPP62633 177 aaKnown RBP6.98□□□□□ -1.29
CDH2-201ENST00000269141 HRES1P13985 223 aa6.98□□□□□ -1.29
CDH2-201ENST00000269141 PSORS1C2Q9UIG4 136 aa6.96□□□□□ -1.3
CDH2-201ENST00000269141 AKAP9Q99996 3911 aa6.94□□□□□ -1.3
CDH2-201ENST00000269141 SPACA4Q8TDM5 124 aa6.92□□□□□ -1.3
CDH2-201ENST00000269141 PANO1I0J062 215 aa6.91□□□□□ -1.3
CDH2-201ENST00000269141 IGKV2D-30A0A075B6S6 120 aa6.9□□□□□ -1.3
CDH2-201ENST00000269141 IGKV2-30P06310 120 aa6.9□□□□□ -1.3
CDH2-201ENST00000269141 DMAC1Q96GE9 116 aa6.9□□□□□ -1.31
CDH2-201ENST00000269141 PLA2G2DQ9UNK4 145 aa6.9□□□□□ -1.31
CDH2-201ENST00000269141 IGLV5-48A0A075B6I7 105 aa6.89□□□□□ -1.31
CDH2-201ENST00000269141 IGFL1Q6UW32 110 aa6.89□□□□□ -1.31
CDH2-201ENST00000269141 ZNF861PO60384 105 aa6.87□□□□□ -1.31
CDH2-201ENST00000269141 KRTAP25-1Q3LHN0 102 aa6.87□□□□□ -1.31
CDH2-201ENST00000269141 KRTAP10-2P60368 255 aa6.87□□□□□ -1.31
CDH2-201ENST00000269141 SRRM2Q9UQ35 2752 aaKnown RBP6.87□□□□□ -1.31
CDH2-201ENST00000269141 LCE6AA0A183 80 aa6.85□□□□□ -1.31
CDH2-201ENST00000269141 TYMSOSQ8TAI1 123 aa6.83□□□□□ -1.32
CDH2-201ENST00000269141 IGLV5-37A0A075B6J1 123 aa6.83□□□□□ -1.32
CDH2-201ENST00000269141 IGLV7-43P04211 117 aa6.83□□□□□ -1.32
CDH2-201ENST00000269141 SPATA8Q6RVD6 105 aa6.83□□□□□ -1.32
CDH2-201ENST00000269141 MRPL34Q9BQ48 92 aaKnown RBP6.83□□□□□ -1.32
CDH2-201ENST00000269141 FAM229AH3BQW9 127 aa6.81□□□□□ -1.32
CDH2-201ENST00000269141 SPRR4Q96PI1 79 aa6.81□□□□□ -1.32
CDH2-201ENST00000269141 FBN3Q75N90 2809 aa6.81□□□□□ -1.32
CDH2-201ENST00000269141 C8orf17Q9NRJ1 99 aa6.8□□□□□ -1.32
CDH2-201ENST00000269141 KRTAP10-1P60331 282 aa6.78□□□□□ -1.32
CDH2-201ENST00000269141 KRTAP11-1Q8IUC1 163 aa6.77□□□□□ -1.33
CDH2-201ENST00000269141 Q6ZRN7 208 aaPredicted RBP6.77□□□□□ -1.33
CDH2-201ENST00000269141 C20orf166-AS1Q96NR2 134 aa6.77□□□□□ -1.33
CDH2-201ENST00000269141 SPRR1AP35321 89 aa6.76□□□□□ -1.33
CDH2-201ENST00000269141 COL7A1Q02388 2944 aa6.76□□□□□ -1.33
CDH2-201ENST00000269141 SEC61BP60468 96 aaKnown RBP6.76□□□□□ -1.33
CDH2-201ENST00000269141 KRTAP7-1Q8IUC3 87 aa6.76□□□□□ -1.33
CDH2-201ENST00000269141 A8MUU9 505 aa6.74□□□□□ -1.33
CDH2-201ENST00000269141 PLAC8Q9NZF1 115 aa6.73□□□□□ -1.33
CDH2-201ENST00000269141 LINC00483Q53H64 154 aa6.72□□□□□ -1.33
CDH2-201ENST00000269141 CSMD3Q7Z407 3707 aa6.69□□□□□ -1.34
CDH2-201ENST00000269141 MMP24-AS1A0A0U1RRL7 71 aa6.68□□□□□ -1.34
CDH2-201ENST00000269141 KRTAP4-16G5E9R7 235 aaPredicted RBP6.68□□□□□ -1.34
CDH2-201ENST00000269141 A0A087X002 238 aa6.68□□□□□ -1.34
CDH2-201ENST00000269141 A0A1B0GVX0 72 aa6.68□□□□□ -1.34
CDH2-201ENST00000269141 KRTAP29-1A8MX34 341 aaPredicted RBP6.66□□□□□ -1.34
CDH2-201ENST00000269141 LINC00304Q8N9R0 145 aa6.66□□□□□ -1.34
CDH2-201ENST00000269141 MEGF8Q7Z7M0 2845 aa6.66□□□□□ -1.34
CDH2-201ENST00000269141 A0A1B0GU33 70 aa6.65□□□□□ -1.34
CDH2-201ENST00000269141 C9orf92A6NGG3 77 aa6.65□□□□□ -1.34
CDH2-201ENST00000269141 KRTAP21-3Q3LHN1 58 aa6.65□□□□□ -1.35
CDH2-201ENST00000269141 A0A0D9SG42 100 aa6.64□□□□□ -1.35
CDH2-201ENST00000269141 Q96NJ1 140 aa6.64□□□□□ -1.35
CDH2-201ENST00000269141 Q8N1X5 172 aa6.59□□□□□ -1.36
CDH2-201ENST00000269141 J3QL48 77 aa6.55□□□□□ -1.36
CDH2-201ENST00000269141 LINC00472Q9H8W2 130 aa6.55□□□□□ -1.36
CDH2-201ENST00000269141 SPRR1BP22528 89 aa6.54□□□□□ -1.36
CDH2-201ENST00000269141 P0C880 135 aa6.51□□□□□ -1.37
CDH2-201ENST00000269141 Q5VSD8 79 aa6.5□□□□□ -1.37
CDH2-201ENST00000269141 DNHD1Q96M86 4753 aa6.5□□□□□ -1.37
CDH2-201ENST00000269141 HUWE1Q7Z6Z7 4374 aaKnown RBP6.46□□□□□ -1.37
CDH2-201ENST00000269141 NOTCH2NLQ7Z3S9 236 aa6.45□□□□□ -1.38
CDH2-201ENST00000269141 KRTAP13-1Q8IUC0 172 aa6.44□□□□□ -1.38
CDH2-201ENST00000269141 Q5W150 140 aa6.43□□□□□ -1.38
CDH2-201ENST00000269141 KRTAP13-2Q52LG2 175 aa6.4□□□□□ -1.39
CDH2-201ENST00000269141 RPL37P61927 97 aaKnown RBP6.37□□□□□ -1.39
CDH2-201ENST00000269141 H1FX-AS1Q4G0G2 97 aa6.36□□□□□ -1.39
CDH2-201ENST00000269141 CAMK2N1Q7Z7J9 78 aa6.36□□□□□ -1.39
CDH2-201ENST00000269141 C10orf95Q9H7T3 257 aa6.35□□□□□ -1.39
CDH2-201ENST00000269141 Q6ZSA8 131 aa6.34□□□□□ -1.39
CDH2-201ENST00000269141 DNAH9Q9NYC9 4486 aa6.33□□□□□ -1.4
CDH2-201ENST00000269141 ANK2Q01484 3957 aa6.32□□□□□ -1.4
CDH2-201ENST00000269141 PRKDCP78527 4128 aaKnown RBP6.28□□□□□ -1.4
CDH2-201ENST00000269141 PLECQ15149 4684 aaKnown RBP6.27□□□□□ -1.41
CDH2-201ENST00000269141 CMYA5Q8N3K9 4069 aa6.25□□□□□ -1.41
CDH2-201ENST00000269141 KRTAP1-4P0C5Y4 121 aa6.25□□□□□ -1.41
CDH2-201ENST00000269141 H0YAA0 97 aa6.23□□□□□ -1.41
CDH2-201ENST00000269141 DNAH3Q8TD57 4116 aa6.21□□□□□ -1.42
CDH2-201ENST00000269141 COX6B2Q6YFQ2 88 aa6.2□□□□□ -1.42
CDH2-201ENST00000269141 DNAH10Q8IVF4 4471 aa6.2□□□□□ -1.42
CDH2-201ENST00000269141 STARD9Q9P2P6 4700 aa6.17□□□□□ -1.42
CDH2-201ENST00000269141 A0A1B0GVY2 172 aa6.15□□□□□ -1.43
CDH2-201ENST00000269141 LYSTQ99698 3801 aa6.09□□□□□ -1.43
CDH2-201ENST00000269141 DNAH11Q96DT5 4516 aa6.08□□□□□ -1.44
CDH2-201ENST00000269141 PLAC4Q8WY50 150 aa6.07□□□□□ -1.44
CDH2-201ENST00000269141 DNAH1Q9P2D7 4330 aa6.05□□□□□ -1.44
CDH2-201ENST00000269141 KMT2AQ03164 3969 aa6.05□□□□□ -1.44
CDH2-201ENST00000269141 TPRXLQ17RH7 258 aa6.05□□□□□ -1.44
CDH2-201ENST00000269141 VPS13DQ5THJ4 4388 aa6.03□□□□□ -1.44
CDH2-201ENST00000269141 KRTAP15-1Q3LI76 137 aa6.03□□□□□ -1.44
CDH2-201ENST00000269141 RPS29P62273 56 aaKnown RBP6.01□□□□□ -1.45
CDH2-201ENST00000269141 DNAH5Q8TE73 4624 aa6□□□□□ -1.45
CDH2-201ENST00000269141 FAT1Q14517 4588 aa5.95□□□□□ -1.46
CDH2-201ENST00000269141 DNAH7Q8WXX0 4024 aa5.94□□□□□ -1.46
CDH2-201ENST00000269141 M0R2T5 61 aa5.93□□□□□ -1.46
CDH2-201ENST00000269141 S4R3F8 94 aa5.93□□□□□ -1.46
CDH2-201ENST00000269141 DYNC2H1Q8NCM8 4307 aaKnown RBP5.9□□□□□ -1.46
CDH2-201ENST00000269141 DNAH17Q9UFH2 4485 aa5.9□□□□□ -1.47
CDH2-201ENST00000269141 KRTAP10-8P60410 259 aa5.89□□□□□ -1.47
CDH2-201ENST00000269141 XP32Q5T750 250 aa5.89□□□□□ -1.47
CDH2-201ENST00000269141 ALMS1Q8TCU4 4167 aa5.89□□□□□ -1.47
CDH2-201ENST00000269141 LRP1BQ9NZR2 4599 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms