RNA–Protein interactions for RNA: ENST00000261667.7

KPNA3-201, Transcript of karyopherin subunit alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA3, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3-201ENST00000261667 NSD1Q96L73 2696 aaPredicted RBP6.56□□□□□ -1.36
KPNA3-201ENST00000261667 ANAPC11Q9NYG5 84 aa6.55□□□□□ -1.36
KPNA3-201ENST00000261667 A0A087X002 238 aa6.54□□□□□ -1.36
KPNA3-201ENST00000261667 NF1P21359 2839 aa6.53□□□□□ -1.36
KPNA3-201ENST00000261667 TNP2Q05952 138 aa6.53□□□□□ -1.36
KPNA3-201ENST00000261667 NBEAL2Q6ZNJ1 2754 aa6.53□□□□□ -1.36
KPNA3-201ENST00000261667 K7EIL1 84 aa6.51□□□□□ -1.37
KPNA3-201ENST00000261667 IGLV5-52A0A0A0MRZ9 124 aa6.5□□□□□ -1.37
KPNA3-201ENST00000261667 SPRR1AP35321 89 aa6.5□□□□□ -1.37
KPNA3-201ENST00000261667 Q5W150 140 aa6.5□□□□□ -1.37
KPNA3-201ENST00000261667 A8MUU9 505 aa6.49□□□□□ -1.37
KPNA3-201ENST00000261667 C20orf166-AS1Q96NR2 134 aa6.48□□□□□ -1.37
KPNA3-201ENST00000261667 ZNF861PO60384 105 aa6.47□□□□□ -1.37
KPNA3-201ENST00000261667 CASC10Q5T4H9 136 aa6.46□□□□□ -1.37
KPNA3-201ENST00000261667 NIPBLQ6KC79 2804 aaeCLIP6.46□□□□□ -1.38
KPNA3-201ENST00000261667 CMYA5Q8N3K9 4069 aa6.45□□□□□ -1.38
KPNA3-201ENST00000261667 LINC00483Q53H64 154 aa6.44□□□□□ -1.38
KPNA3-201ENST00000261667 RPL37P61927 97 aaKnown RBP6.44□□□□□ -1.38
KPNA3-201ENST00000261667 SEC61BP60468 96 aaKnown RBP6.43□□□□□ -1.38
KPNA3-201ENST00000261667 KRTAP26-1Q6PEX3 210 aa6.43□□□□□ -1.38
KPNA3-201ENST00000261667 PSORS1C2Q9UIG4 136 aa6.42□□□□□ -1.38
KPNA3-201ENST00000261667 KRTAP10-3P60369 221 aa6.41□□□□□ -1.38
KPNA3-201ENST00000261667 H1FX-AS1Q4G0G2 97 aa6.41□□□□□ -1.38
KPNA3-201ENST00000261667 HIVEP1P15822 2718 aa6.4□□□□□ -1.38
KPNA3-201ENST00000261667 DNAH3Q8TD57 4116 aa6.39□□□□□ -1.39
KPNA3-201ENST00000261667 TYMSOSQ8TAI1 123 aa6.39□□□□□ -1.39
KPNA3-201ENST00000261667 STAB2Q8WWQ8 2551 aa6.37□□□□□ -1.39
KPNA3-201ENST00000261667 TENM1Q9UKZ4 2725 aa6.36□□□□□ -1.39
KPNA3-201ENST00000261667 VWFP04275 2813 aa6.36□□□□□ -1.39
KPNA3-201ENST00000261667 SPRR1BP22528 89 aa6.35□□□□□ -1.39
KPNA3-201ENST00000261667 PANO1I0J062 215 aa6.34□□□□□ -1.39
KPNA3-201ENST00000261667 KRTAP11-1Q8IUC1 163 aa6.33□□□□□ -1.4
KPNA3-201ENST00000261667 C9orf92A6NGG3 77 aa6.33□□□□□ -1.4
KPNA3-201ENST00000261667 LINC00304Q8N9R0 145 aa6.33□□□□□ -1.4
KPNA3-201ENST00000261667 TRRAPQ9Y4A5 3859 aa6.33□□□□□ -1.4
KPNA3-201ENST00000261667 ANK2Q01484 3957 aa6.33□□□□□ -1.4
KPNA3-201ENST00000261667 KRTAP4-16G5E9R7 235 aaPredicted RBP6.33□□□□□ -1.4
KPNA3-201ENST00000261667 KRTAP10-11P60412 298 aa6.32□□□□□ -1.4
KPNA3-201ENST00000261667 PLAC8Q9NZF1 115 aa6.3□□□□□ -1.4
KPNA3-201ENST00000261667 FBN1P35555 2871 aaKnown RBP6.28□□□□□ -1.4
KPNA3-201ENST00000261667 NOTCH2NLQ7Z3S9 236 aa6.28□□□□□ -1.4
KPNA3-201ENST00000261667 NBDYA0A0U1RRE5 68 aa6.27□□□□□ -1.41
KPNA3-201ENST00000261667 CAMK2N1Q7Z7J9 78 aa6.23□□□□□ -1.41
KPNA3-201ENST00000261667 WWC2-AS2Q96NR7 200 aa6.2□□□□□ -1.42
KPNA3-201ENST00000261667 PKD1L1Q8TDX9 2849 aa6.17□□□□□ -1.42
KPNA3-201ENST00000261667 C10orf95Q9H7T3 257 aa6.16□□□□□ -1.42
KPNA3-201ENST00000261667 Q6ZSA8 131 aa6.13□□□□□ -1.43
KPNA3-201ENST00000261667 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.13□□□□□ -1.43
KPNA3-201ENST00000261667 A0A087WTM6 91 aa6.1□□□□□ -1.43
KPNA3-201ENST00000261667 SMR3BP02814 79 aaPredicted RBP6.1□□□□□ -1.43
KPNA3-201ENST00000261667 HUWE1Q7Z6Z7 4374 aaKnown RBP6.09□□□□□ -1.43
KPNA3-201ENST00000261667 COX6B2Q6YFQ2 88 aa6.09□□□□□ -1.44
KPNA3-201ENST00000261667 H0YAA0 97 aa6.08□□□□□ -1.44
KPNA3-201ENST00000261667 DNAH1Q9P2D7 4330 aa6.08□□□□□ -1.44
KPNA3-201ENST00000261667 DYNC2H1Q8NCM8 4307 aaKnown RBP6.06□□□□□ -1.44
KPNA3-201ENST00000261667 S4R3F8 94 aa6.05□□□□□ -1.44
KPNA3-201ENST00000261667 P0C880 135 aa6.04□□□□□ -1.44
KPNA3-201ENST00000261667 PLAC4Q8WY50 150 aa6.04□□□□□ -1.44
KPNA3-201ENST00000261667 KRTAP7-1Q8IUC3 87 aa6.03□□□□□ -1.44
KPNA3-201ENST00000261667 DNAH9Q9NYC9 4486 aa6.02□□□□□ -1.44
KPNA3-201ENST00000261667 COL7A1Q02388 2944 aa6□□□□□ -1.45
KPNA3-201ENST00000261667 TENM3Q9P273 2699 aa6□□□□□ -1.45
KPNA3-201ENST00000261667 R4GN34 69 aa5.99□□□□□ -1.45
KPNA3-201ENST00000261667 DNAH7Q8WXX0 4024 aa5.97□□□□□ -1.45
KPNA3-201ENST00000261667 CSMD3Q7Z407 3707 aa5.96□□□□□ -1.45
KPNA3-201ENST00000261667 LYSTQ99698 3801 aa5.96□□□□□ -1.46
KPNA3-201ENST00000261667 M0QZ58 72 aa5.93□□□□□ -1.46
KPNA3-201ENST00000261667 DNHD1Q96M86 4753 aa5.93□□□□□ -1.46
KPNA3-201ENST00000261667 J3QL48 77 aa5.92□□□□□ -1.46
KPNA3-201ENST00000261667 PRKDCP78527 4128 aaKnown RBP5.91□□□□□ -1.46
KPNA3-201ENST00000261667 KRTAP1-5Q9BYS1 174 aa5.91□□□□□ -1.46
KPNA3-201ENST00000261667 PLECQ15149 4684 aaKnown RBP5.85□□□□□ -1.47
KPNA3-201ENST00000261667 STARD9Q9P2P6 4700 aa5.84□□□□□ -1.47
KPNA3-201ENST00000261667 DNAH10Q8IVF4 4471 aa5.83□□□□□ -1.48
KPNA3-201ENST00000261667 MEGF8Q7Z7M0 2845 aa5.83□□□□□ -1.48
KPNA3-201ENST00000261667 VPS13DQ5THJ4 4388 aa5.81□□□□□ -1.48
KPNA3-201ENST00000261667 TPRXLQ17RH7 258 aa5.8□□□□□ -1.48
KPNA3-201ENST00000261667 KRTAP13-1Q8IUC0 172 aa5.8□□□□□ -1.48
KPNA3-201ENST00000261667 KRTAP10-8P60410 259 aa5.76□□□□□ -1.49
KPNA3-201ENST00000261667 SRRM2Q9UQ35 2752 aaKnown RBP5.76□□□□□ -1.49
KPNA3-201ENST00000261667 DNAH6Q9C0G6 4158 aa5.76□□□□□ -1.49
KPNA3-201ENST00000261667 TENM2Q9NT68 2774 aa5.75□□□□□ -1.49
KPNA3-201ENST00000261667 Q6ZRN7 208 aaPredicted RBP5.75□□□□□ -1.49
KPNA3-201ENST00000261667 DNAH2Q9P225 4427 aa5.73□□□□□ -1.49
KPNA3-201ENST00000261667 KRTAP21-3Q3LHN1 58 aa5.72□□□□□ -1.49
KPNA3-201ENST00000261667 TGP01266 2768 aa5.71□□□□□ -1.5
KPNA3-201ENST00000261667 KRTAP10-2P60368 255 aa5.71□□□□□ -1.5
KPNA3-201ENST00000261667 FRAS1Q86XX4 4008 aa5.71□□□□□ -1.5
KPNA3-201ENST00000261667 KMT2AQ03164 3969 aa5.71□□□□□ -1.5
KPNA3-201ENST00000261667 KRTAP13-3Q3SY46 172 aa5.7□□□□□ -1.5
KPNA3-201ENST00000261667 HECTD4Q9Y4D8 3996 aa5.7□□□□□ -1.5
KPNA3-201ENST00000261667 KRTAP15-1Q3LI76 137 aa5.7□□□□□ -1.5
KPNA3-201ENST00000261667 FBN3Q75N90 2809 aa5.68□□□□□ -1.5
KPNA3-201ENST00000261667 KRTAP10-1P60331 282 aa5.67□□□□□ -1.5
KPNA3-201ENST00000261667 PP632Q6XCG6 107 aa5.66□□□□□ -1.5
KPNA3-201ENST00000261667 KRTAP13-2Q52LG2 175 aa5.64□□□□□ -1.51
KPNA3-201ENST00000261667 DNAH17Q9UFH2 4485 aa5.64□□□□□ -1.51
KPNA3-201ENST00000261667 ALMS1Q8TCU4 4167 aa5.63□□□□□ -1.51
KPNA3-201ENST00000261667 HYDINQ4G0P3 5121 aa5.6□□□□□ -1.51
KPNA3-201ENST00000261667 DNAH11Q96DT5 4516 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms