RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 CPSF4LA6NMK7 179 aaKnown RBP0.72□□□□□ -2.29
ATM-230ENST00000640388 CCKP06307 115 aa0.72□□□□□ -2.29
ATM-230ENST00000640388 UBE2D3P61077 147 aa0.72□□□□□ -2.29
ATM-230ENST00000640388 MIC13Q5XKP0 118 aa0.72□□□□□ -2.29
ATM-230ENST00000640388 LINC00474Q9P2X8 69 aa0.72□□□□□ -2.29
ATM-230ENST00000640388 NDUFA12Q9UI09 145 aa0.72□□□□□ -2.29
ATM-230ENST00000640388 APOC1P02654 83 aa0.71□□□□□ -2.3
ATM-230ENST00000640388 SFTA3P0C7M3 94 aa0.71□□□□□ -2.3
ATM-230ENST00000640388 SLC25A6P12236 298 aa0.71□□□□□ -2.3
ATM-230ENST00000640388 RPL38P63173 70 aaKnown RBP0.71□□□□□ -2.3
ATM-230ENST00000640388 PRCDQ00LT1 54 aa0.71□□□□□ -2.3
ATM-230ENST00000640388 SPANXN1Q5VSR9 72 aa0.71□□□□□ -2.3
ATM-230ENST00000640388 RPL13AP3Q6NVV1 102 aa0.71□□□□□ -2.3
ATM-230ENST00000640388 ENHOQ6UWT2 76 aa0.71□□□□□ -2.3
ATM-230ENST00000640388 PSMG3Q9BT73 122 aaPredicted RBP0.71□□□□□ -2.3
ATM-230ENST00000640388 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
ATM-230ENST00000640388 LOC101927531A0A1B0GV80 90 aa0.7□□□□□ -2.3
ATM-230ENST00000640388 A6NIN4 97 aa0.7□□□□□ -2.3
ATM-230ENST00000640388 M0R129 80 aa0.7□□□□□ -2.3
ATM-230ENST00000640388 CYB5AP00167 134 aa0.7□□□□□ -2.3
ATM-230ENST00000640388 KLKP1Q107X0 134 aa0.7□□□□□ -2.3
ATM-230ENST00000640388 IQCJQ1A5X6 159 aa0.7□□□□□ -2.3
ATM-230ENST00000640388 Q56UQ5 140 aa0.7□□□□□ -2.3
ATM-230ENST00000640388 SPAG11AQ6PDA7 123 aa0.7□□□□□ -2.3
ATM-230ENST00000640388 KCNRGQ8N5I3 272 aa0.7□□□□□ -2.3
ATM-230ENST00000640388 PPP1R1CQ8WVI7 109 aa0.7□□□□□ -2.3
ATM-230ENST00000640388 COPS9Q8WXC6 57 aa0.7□□□□□ -2.3
ATM-230ENST00000640388 I3L2K1 104 aa0.69□□□□□ -2.3
ATM-230ENST00000640388 K7EIM0 57 aa0.69□□□□□ -2.3
ATM-230ENST00000640388 SPINK4O60575 86 aa0.69□□□□□ -2.3
ATM-230ENST00000640388 FGF7P21781 194 aa0.69□□□□□ -2.3
ATM-230ENST00000640388 MT1XP80297 61 aa0.69□□□□□ -2.3
ATM-230ENST00000640388 Q0VG73 95 aa0.69□□□□□ -2.3
ATM-230ENST00000640388 C9orf116Q5BN46 136 aaPredicted RBP0.69□□□□□ -2.3
ATM-230ENST00000640388 GNG7O60262 68 aa0.68□□□□□ -2.3
ATM-230ENST00000640388 FXYD6P3P58550 94 aa0.68□□□□□ -2.3
ATM-230ENST00000640388 Q86TA4 180 aa0.68□□□□□ -2.3
ATM-230ENST00000640388 TMEM141Q96I45 108 aa0.68□□□□□ -2.3
ATM-230ENST00000640388 LINC00208Q96KT6 92 aa0.68□□□□□ -2.3
ATM-230ENST00000640388 TMEM242Q9NWH2 141 aa0.68□□□□□ -2.3
ATM-230ENST00000640388 FXYD6-FXYD2A0A087WZ82 144 aa0.67□□□□□ -2.3
ATM-230ENST00000640388 IGLC7A0M8Q6 106 aa0.67□□□□□ -2.3
ATM-230ENST00000640388 MIF4GDA9UHW6 222 aaKnown RBP0.67□□□□□ -2.3
ATM-230ENST00000640388 NDUFB6O95139 128 aa0.67□□□□□ -2.3
ATM-230ENST00000640388 IL5P05113 134 aa0.67□□□□□ -2.3
ATM-230ENST00000640388 ZNF56Q15929 161 aa0.67□□□□□ -2.3
ATM-230ENST00000640388 CYP2G1PQ6ZSU1 146 aa0.67□□□□□ -2.3
ATM-230ENST00000640388 TMEM203Q969S6 136 aa0.67□□□□□ -2.3
ATM-230ENST00000640388 IFI27L1Q96BM0 104 aa0.67□□□□□ -2.3
ATM-230ENST00000640388 TRAV12-3A0A0B4J271 114 aa0.66□□□□□ -2.3
ATM-230ENST00000640388 TCRBV3S1A0A5B6 114 aa0.66□□□□□ -2.3
ATM-230ENST00000640388 FAM25AB3EWG3 89 aa0.66□□□□□ -2.3
ATM-230ENST00000640388 FAM25CB3EWG5 89 aa0.66□□□□□ -2.3
ATM-230ENST00000640388 FAM25GB3EWG6 89 aa0.66□□□□□ -2.3
ATM-230ENST00000640388 MCRIP1C9JLW8 97 aa0.66□□□□□ -2.3
ATM-230ENST00000640388 DLEU1O43261 78 aa0.66□□□□□ -2.3
ATM-230ENST00000640388 C12orf73Q69YU5 71 aa0.66□□□□□ -2.3
ATM-230ENST00000640388 CLPSL2Q6UWE3 100 aa0.66□□□□□ -2.3
ATM-230ENST00000640388 MT1MQ8N339 61 aa0.66□□□□□ -2.3
ATM-230ENST00000640388 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.66□□□□□ -2.3
ATM-230ENST00000640388 PLAC4Q8WY50 150 aa0.66□□□□□ -2.3
ATM-230ENST00000640388 PDCD10Q9BUL8 212 aa0.66□□□□□ -2.3
ATM-230ENST00000640388 SPRR2GQ9BYE4 73 aa0.66□□□□□ -2.3
ATM-230ENST00000640388 BET1LQ9NYM9 111 aa0.66□□□□□ -2.3
ATM-230ENST00000640388 IER3IP1Q9Y5U9 82 aa0.66□□□□□ -2.3
ATM-230ENST00000640388 FAM24AA6NFZ4 105 aa0.65□□□□□ -2.31
ATM-230ENST00000640388 NPC2P61916 151 aa0.65□□□□□ -2.31
ATM-230ENST00000640388 SSBP1Q04837 148 aaKnown RBP0.65□□□□□ -2.31
ATM-230ENST00000640388 KRTAP21-1Q3LI58 79 aa0.65□□□□□ -2.31
ATM-230ENST00000640388 PIGYQ3MUY2 71 aa0.65□□□□□ -2.31
ATM-230ENST00000640388 MEIG1Q5JSS6 88 aa0.65□□□□□ -2.31
ATM-230ENST00000640388 Q6AWC8 147 aa0.65□□□□□ -2.31
ATM-230ENST00000640388 C2orf88Q9BSF0 95 aa0.65□□□□□ -2.31
ATM-230ENST00000640388 AGPAT4-IT1Q9H0P7 198 aa0.65□□□□□ -2.31
ATM-230ENST00000640388 NAA60Q9H7X0 242 aa0.65□□□□□ -2.31
ATM-230ENST00000640388 RPRMQ9NS64 109 aa0.65□□□□□ -2.31
ATM-230ENST00000640388 SERP1Q9Y6X1 66 aa0.65□□□□□ -2.31
ATM-230ENST00000640388 V9GYS6 101 aa0.65□□□□□ -2.31
ATM-230ENST00000640388 A0A1B0GV90 55 aa0.64□□□□□ -2.31
ATM-230ENST00000640388 RBAKDNA6NC62 111 aa0.64□□□□□ -2.31
ATM-230ENST00000640388 FXYD1O00168 92 aa0.64□□□□□ -2.31
ATM-230ENST00000640388 SPINK1P00995 79 aa0.64□□□□□ -2.31
ATM-230ENST00000640388 MT1EP04732 61 aa0.64□□□□□ -2.31
ATM-230ENST00000640388 LINC00032P0C843 101 aa0.64□□□□□ -2.31
ATM-230ENST00000640388 SEC11CQ9BY50 192 aa0.64□□□□□ -2.31
ATM-230ENST00000640388 PIGBOS1A0A0B4J2F0 54 aa0.63□□□□□ -2.31
ATM-230ENST00000640388 TRBV10-3A0A0K0K1G6 114 aa0.63□□□□□ -2.31
ATM-230ENST00000640388 H0YAA0 97 aa0.63□□□□□ -2.31
ATM-230ENST00000640388 SNCGO76070 127 aa0.63□□□□□ -2.31
ATM-230ENST00000640388 HIST1H1DP16402 221 aaKnown RBP0.63□□□□□ -2.31
ATM-230ENST00000640388 RBP2P50120 134 aa0.63□□□□□ -2.31
ATM-230ENST00000640388 ELOF1P60002 83 aaKnown RBP0.63□□□□□ -2.31
ATM-230ENST00000640388 WT1-ASQ06250 92 aa0.63□□□□□ -2.31
ATM-230ENST00000640388 KRTAP19-7Q3SYF9 63 aa0.63□□□□□ -2.31
ATM-230ENST00000640388 RPL7L1Q6DKI1 246 aaKnown RBP0.63□□□□□ -2.31
ATM-230ENST00000640388 ZNF818PQ6ZRF7 136 aa0.63□□□□□ -2.31
ATM-230ENST00000640388 PP6455Q8WZ26 134 aa0.63□□□□□ -2.31
ATM-230ENST00000640388 DSCR8Q96T75 97 aa0.63□□□□□ -2.31
ATM-230ENST00000640388 MT1GP13640 62 aa0.62□□□□□ -2.31
ATM-230ENST00000640388 UBE2G1P62253 170 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms