RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 LINC00474Q9P2X8 69 aa9.41□□□□□ -0.9
TRIM3-215ENST00000639856 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.41□□□□□ -0.9
TRIM3-215ENST00000639856 ALMS1Q8TCU4 4167 aa9.41□□□□□ -0.9
TRIM3-215ENST00000639856 HECTD4Q9Y4D8 3996 aa9.41□□□□□ -0.9
TRIM3-215ENST00000639856 J3KT08 172 aa9.41□□□□□ -0.9
TRIM3-215ENST00000639856 HIGD2AQ9BW72 106 aa9.41□□□□□ -0.9
TRIM3-215ENST00000639856 F8WEM9 126 aa9.4□□□□□ -0.91
TRIM3-215ENST00000639856 BPY2O14599 106 aa9.4□□□□□ -0.91
TRIM3-215ENST00000639856 DNAH6Q9C0G6 4158 aa9.39□□□□□ -0.91
TRIM3-215ENST00000639856 H0Y9J4 135 aa9.39□□□□□ -0.91
TRIM3-215ENST00000639856 TRAV7A0A075B6U4 112 aa9.38□□□□□ -0.91
TRIM3-215ENST00000639856 IGKV4-1P06312 121 aa9.38□□□□□ -0.91
TRIM3-215ENST00000639856 Q8N9L7 120 aa9.37□□□□□ -0.91
TRIM3-215ENST00000639856 SPACA4Q8TDM5 124 aa9.37□□□□□ -0.91
TRIM3-215ENST00000639856 DPH3Q96FX2 82 aa9.37□□□□□ -0.91
TRIM3-215ENST00000639856 EPM2AB3EWF7 344 aa9.37□□□□□ -0.91
TRIM3-215ENST00000639856 TMEM258P61165 79 aa9.37□□□□□ -0.91
TRIM3-215ENST00000639856 C5orf47Q569G3 176 aa9.37□□□□□ -0.91
TRIM3-215ENST00000639856 DNAH17Q9UFH2 4485 aa9.36□□□□□ -0.91
TRIM3-215ENST00000639856 IGLV5-52A0A0A0MRZ9 124 aa9.35□□□□□ -0.91
TRIM3-215ENST00000639856 IGLV8-61A0A075B6I0 122 aa9.35□□□□□ -0.91
TRIM3-215ENST00000639856 RPS28P62857 69 aaKnown RBP9.35□□□□□ -0.91
TRIM3-215ENST00000639856 IGFL1Q6UW32 110 aa9.34□□□□□ -0.91
TRIM3-215ENST00000639856 OXTP01178 125 aa9.33□□□□□ -0.92
TRIM3-215ENST00000639856 HYDINQ4G0P3 5121 aa9.33□□□□□ -0.92
TRIM3-215ENST00000639856 UBE2AP49459 152 aa9.32□□□□□ -0.92
TRIM3-215ENST00000639856 C20orf197Q8N268 126 aa9.32□□□□□ -0.92
TRIM3-215ENST00000639856 FRAS1Q86XX4 4008 aa9.32□□□□□ -0.92
TRIM3-215ENST00000639856 SPRR1BP22528 89 aa9.32□□□□□ -0.92
TRIM3-215ENST00000639856 A0A0G2JQZ4 141 aa9.31□□□□□ -0.92
TRIM3-215ENST00000639856 SRRM2Q9UQ35 2752 aaKnown RBP9.31□□□□□ -0.92
TRIM3-215ENST00000639856 KRTAP10-2P60368 255 aa9.31□□□□□ -0.92
TRIM3-215ENST00000639856 KRTAP13-1Q8IUC0 172 aa9.28□□□□□ -0.92
TRIM3-215ENST00000639856 DSCR10P59022 87 aa9.26□□□□□ -0.93
TRIM3-215ENST00000639856 KLKP1Q107X0 134 aa9.26□□□□□ -0.93
TRIM3-215ENST00000639856 PLAC8Q9NZF1 115 aa9.25□□□□□ -0.93
TRIM3-215ENST00000639856 A0A087WSZ3 146 aa9.24□□□□□ -0.93
TRIM3-215ENST00000639856 DNAH11Q96DT5 4516 aa9.24□□□□□ -0.93
TRIM3-215ENST00000639856 OCR1Q9BZK8 76 aa9.23□□□□□ -0.93
TRIM3-215ENST00000639856 FAT2Q9NYQ8 4349 aa9.23□□□□□ -0.93
TRIM3-215ENST00000639856 C4orf26Q17RF5 130 aa9.23□□□□□ -0.93
TRIM3-215ENST00000639856 K7EQZ3 153 aa9.22□□□□□ -0.93
TRIM3-215ENST00000639856 Q5XG85 94 aa9.22□□□□□ -0.93
TRIM3-215ENST00000639856 FAM30AQ9NZY2 134 aa9.22□□□□□ -0.93
TRIM3-215ENST00000639856 H7BZZ5 65 aa9.21□□□□□ -0.94
TRIM3-215ENST00000639856 SNURFQ9Y675 71 aa9.21□□□□□ -0.94
TRIM3-215ENST00000639856 PKD1P98161 4303 aa9.21□□□□□ -0.94
TRIM3-215ENST00000639856 DNAH5Q8TE73 4624 aa9.2□□□□□ -0.94
TRIM3-215ENST00000639856 DNAH8Q96JB1 4490 aa9.19□□□□□ -0.94
TRIM3-215ENST00000639856 SACSQ9NZJ4 4579 aa9.19□□□□□ -0.94
TRIM3-215ENST00000639856 PSORS1C2Q9UIG4 136 aa9.19□□□□□ -0.94
TRIM3-215ENST00000639856 LCE6AA0A183 80 aa9.17□□□□□ -0.94
TRIM3-215ENST00000639856 KRTAP10-1P60331 282 aa9.17□□□□□ -0.94
TRIM3-215ENST00000639856 DEFB116Q30KQ4 102 aa9.17□□□□□ -0.94
TRIM3-215ENST00000639856 HRCT1Q6UXD1 115 aa9.17□□□□□ -0.94
TRIM3-215ENST00000639856 TMEM254Q8TBM7 123 aa9.17□□□□□ -0.94
TRIM3-215ENST00000639856 CIRBP-AS1Q8TBR5 109 aa9.15□□□□□ -0.94
TRIM3-215ENST00000639856 NDUFC1O43677 76 aa9.14□□□□□ -0.95
TRIM3-215ENST00000639856 HCG22E2RYF7 251 aa9.14□□□□□ -0.95
TRIM3-215ENST00000639856 LINC00483Q53H64 154 aa9.14□□□□□ -0.95
TRIM3-215ENST00000639856 FAM236DA0A1B0GTK5 79 aa9.13□□□□□ -0.95
TRIM3-215ENST00000639856 FAM236CP0DP71 79 aa9.13□□□□□ -0.95
TRIM3-215ENST00000639856 Q6ZSA8 131 aa9.12□□□□□ -0.95
TRIM3-215ENST00000639856 ZNF706Q9Y5V0 76 aaPredicted RBP9.12□□□□□ -0.95
TRIM3-215ENST00000639856 A0A0U1RQV1 116 aa9.11□□□□□ -0.95
TRIM3-215ENST00000639856 IGLV9-49A0A0B4J1Y8 123 aa9.11□□□□□ -0.95
TRIM3-215ENST00000639856 LINC00472Q9H8W2 130 aa9.11□□□□□ -0.95
TRIM3-215ENST00000639856 ZNF861PO60384 105 aa9.1□□□□□ -0.95
TRIM3-215ENST00000639856 RPL37AP61513 92 aaKnown RBP9.1□□□□□ -0.95
TRIM3-215ENST00000639856 A8MWP4 228 aa9.07□□□□□ -0.96
TRIM3-215ENST00000639856 PRR15Q8IV56 129 aa9.07□□□□□ -0.96
TRIM3-215ENST00000639856 SERP1Q9Y6X1 66 aa9.07□□□□□ -0.96
TRIM3-215ENST00000639856 PKHD1P08F94 4074 aa9.06□□□□□ -0.96
TRIM3-215ENST00000639856 ATP5EP56381 51 aaPredicted RBP9.05□□□□□ -0.96
TRIM3-215ENST00000639856 WFDC13Q8IUB5 93 aa9.05□□□□□ -0.96
TRIM3-215ENST00000639856 IGLV7-43P04211 117 aa9.05□□□□□ -0.96
TRIM3-215ENST00000639856 KRTAP29-1A8MX34 341 aaPredicted RBP9.04□□□□□ -0.96
TRIM3-215ENST00000639856 KMT2CQ8NEZ4 4911 aaKnown RBP9.03□□□□□ -0.96
TRIM3-215ENST00000639856 LINC00336Q6ZUF6 198 aa9.02□□□□□ -0.96
TRIM3-215ENST00000639856 ANAPC11Q9NYG5 84 aa9.02□□□□□ -0.96
TRIM3-215ENST00000639856 MOBPQ13875 183 aa9.02□□□□□ -0.97
TRIM3-215ENST00000639856 LRP1BQ9NZR2 4599 aa9.01□□□□□ -0.97
TRIM3-215ENST00000639856 CASC2Q6XLA1 102 aa9.01□□□□□ -0.97
TRIM3-215ENST00000639856 RYR2Q92736 4967 aa9□□□□□ -0.97
TRIM3-215ENST00000639856 Q96NJ1 140 aa9□□□□□ -0.97
TRIM3-215ENST00000639856 A0A1B0GVY2 172 aa8.99□□□□□ -0.97
TRIM3-215ENST00000639856 ZCCHC13Q8WW36 166 aaKnown RBP8.98□□□□□ -0.97
TRIM3-215ENST00000639856 NDUFB1O75438 58 aa8.97□□□□□ -0.97
TRIM3-215ENST00000639856 FP248Q71RG6 208 aaPredicted RBP8.96□□□□□ -0.98
TRIM3-215ENST00000639856 MMP24-AS1A0A0U1RRL7 71 aa8.95□□□□□ -0.98
TRIM3-215ENST00000639856 SMIM26A0A096LP01 95 aa8.93□□□□□ -0.98
TRIM3-215ENST00000639856 MP68P56378 58 aa8.92□□□□□ -0.98
TRIM3-215ENST00000639856 PRO0628Q9UI54 55 aa8.91□□□□□ -0.98
TRIM3-215ENST00000639856 hDV103S1A0JD37 113 aa8.9□□□□□ -0.98
TRIM3-215ENST00000639856 DYNC1H1Q14204 4646 aaKnown RBP8.9□□□□□ -0.98
TRIM3-215ENST00000639856 VPS13BQ7Z7G8 4022 aa8.9□□□□□ -0.99
TRIM3-215ENST00000639856 ASB16-AS1Q495Z4 193 aa8.89□□□□□ -0.99
TRIM3-215ENST00000639856 A0A1B0GVX0 72 aa8.87□□□□□ -0.99
TRIM3-215ENST00000639856 H0Y9P7 68 aa8.87□□□□□ -0.99
TRIM3-215ENST00000639856 SSBP3-AS1Q7Z2R9 100 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms