RNA–Protein interactions for RNA: ENST00000637538.1

CLCN2-220, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 1,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-220ENST00000637538 IGLV7-43P04211 117 aa10.2□□□□□ -0.78
CLCN2-220ENST00000637538 ZNF861PO60384 105 aa10.19□□□□□ -0.78
CLCN2-220ENST00000637538 Q8N377 158 aa10.19□□□□□ -0.78
CLCN2-220ENST00000637538 C14orf132Q9NPU4 83 aa10.19□□□□□ -0.78
CLCN2-220ENST00000637538 VPS13BQ7Z7G8 4022 aa10.19□□□□□ -0.78
CLCN2-220ENST00000637538 MT-ATP8P03928 68 aa10.17□□□□□ -0.78
CLCN2-220ENST00000637538 GAGE2AQ6NT46 116 aa10.17□□□□□ -0.78
CLCN2-220ENST00000637538 C21orf62-AS1Q17RA5 79 aa10.16□□□□□ -0.78
CLCN2-220ENST00000637538 A0A1B0GV72 72 aa10.15□□□□□ -0.78
CLCN2-220ENST00000637538 CCKP06307 115 aa10.15□□□□□ -0.78
CLCN2-220ENST00000637538 DEFB105AQ8NG35 78 aa10.15□□□□□ -0.78
CLCN2-220ENST00000637538 SPRR1BP22528 89 aa10.14□□□□□ -0.79
CLCN2-220ENST00000637538 RBM3P98179 157 aaKnown RBP10.14□□□□□ -0.79
CLCN2-220ENST00000637538 LAMTOR3Q9UHA4 124 aa10.14□□□□□ -0.79
CLCN2-220ENST00000637538 NDUFV3P56181 108 aaKnown RBP10.12□□□□□ -0.79
CLCN2-220ENST00000637538 Q6Q795 121 aa10.12□□□□□ -0.79
CLCN2-220ENST00000637538 SMIM29Q86T20 159 aa10.12□□□□□ -0.79
CLCN2-220ENST00000637538 PDE6GP18545 87 aa10.12□□□□□ -0.79
CLCN2-220ENST00000637538 HSPG2P98160 4391 aa10.11□□□□□ -0.79
CLCN2-220ENST00000637538 LOC110117498A0A087WWA1 95 aa10.11□□□□□ -0.79
CLCN2-220ENST00000637538 LINC00643Q86TS7 51 aa10.11□□□□□ -0.79
CLCN2-220ENST00000637538 SPRR4Q96PI1 79 aa10.11□□□□□ -0.79
CLCN2-220ENST00000637538 FAT1Q14517 4588 aa10.1□□□□□ -0.79
CLCN2-220ENST00000637538 SMR3BP02814 79 aaPredicted RBP10.09□□□□□ -0.79
CLCN2-220ENST00000637538 KRTAP10-4P60372 401 aaPredicted RBP10.09□□□□□ -0.79
CLCN2-220ENST00000637538 RPL37AP61513 92 aaKnown RBP10.09□□□□□ -0.79
CLCN2-220ENST00000637538 LINC00483Q53H64 154 aa10.09□□□□□ -0.79
CLCN2-220ENST00000637538 Q8N1X5 172 aa10.09□□□□□ -0.79
CLCN2-220ENST00000637538 C3orf22Q8N5N4 141 aa10.09□□□□□ -0.79
CLCN2-220ENST00000637538 DSCR8Q96T75 97 aa10.08□□□□□ -0.8
CLCN2-220ENST00000637538 Q6ZQT0 140 aa10.07□□□□□ -0.8
CLCN2-220ENST00000637538 ZNF706Q9Y5V0 76 aaPredicted RBP10.07□□□□□ -0.8
CLCN2-220ENST00000637538 IMUPQ9GZP8 106 aa10.05□□□□□ -0.8
CLCN2-220ENST00000637538 TRBV7-4A0A0J9YYF1 115 aa10.04□□□□□ -0.8
CLCN2-220ENST00000637538 TRBV7-7A0A0K0K1E9 115 aa10.04□□□□□ -0.8
CLCN2-220ENST00000637538 KRTAP4-5Q9BYR2 181 aa10.04□□□□□ -0.8
CLCN2-220ENST00000637538 LINC00846Q9NV44 126 aa10.04□□□□□ -0.8
CLCN2-220ENST00000637538 IGLV8-61A0A075B6I0 122 aa10.03□□□□□ -0.8
CLCN2-220ENST00000637538 SPINK6Q6UWN8 80 aa9.99□□□□□ -0.81
CLCN2-220ENST00000637538 F8WEM9 126 aa9.98□□□□□ -0.81
CLCN2-220ENST00000637538 Q6JHZ5 121 aa9.98□□□□□ -0.81
CLCN2-220ENST00000637538 ANAPC11Q9NYG5 84 aa9.98□□□□□ -0.81
CLCN2-220ENST00000637538 PKHD1L1Q86WI1 4243 aa9.98□□□□□ -0.81
CLCN2-220ENST00000637538 KRTAP1-4P0C5Y4 121 aa9.97□□□□□ -0.81
CLCN2-220ENST00000637538 HERC1Q15751 4861 aa9.97□□□□□ -0.81
CLCN2-220ENST00000637538 UBL5Q9BZL1 73 aa9.96□□□□□ -0.82
CLCN2-220ENST00000637538 FAM229AH3BQW9 127 aa9.95□□□□□ -0.82
CLCN2-220ENST00000637538 Q5VSD8 79 aa9.94□□□□□ -0.82
CLCN2-220ENST00000637538 IGFL1Q6UW32 110 aa9.94□□□□□ -0.82
CLCN2-220ENST00000637538 PLA2G1BP04054 148 aaKnown RBP9.93□□□□□ -0.82
CLCN2-220ENST00000637538 FAM229BQ4G0N7 80 aa9.93□□□□□ -0.82
CLCN2-220ENST00000637538 ATP5EP2Q5VTU8 51 aa9.93□□□□□ -0.82
CLCN2-220ENST00000637538 ANAPC13Q9BS18 74 aa9.92□□□□□ -0.82
CLCN2-220ENST00000637538 A0A1W2PNM2 257 aa9.92□□□□□ -0.82
CLCN2-220ENST00000637538 IGLV9-49A0A0B4J1Y8 123 aa9.91□□□□□ -0.82
CLCN2-220ENST00000637538 A0A0G2JQZ4 141 aa9.91□□□□□ -0.82
CLCN2-220ENST00000637538 A0A1B0GW54 56 aa9.91□□□□□ -0.82
CLCN2-220ENST00000637538 A0A087X002 238 aa9.89□□□□□ -0.83
CLCN2-220ENST00000637538 Q8NBF4 154 aa9.89□□□□□ -0.83
CLCN2-220ENST00000637538 IGKV3D-7A0A0C4DH55 119 aa9.88□□□□□ -0.83
CLCN2-220ENST00000637538 MOBPQ13875 183 aa9.88□□□□□ -0.83
CLCN2-220ENST00000637538 KRTAP13-2Q52LG2 175 aa9.88□□□□□ -0.83
CLCN2-220ENST00000637538 C9orf153Q5TBE3 101 aa9.88□□□□□ -0.83
CLCN2-220ENST00000637538 Q6ZVQ6 151 aa9.87□□□□□ -0.83
CLCN2-220ENST00000637538 CRYGAP11844 174 aa9.85□□□□□ -0.83
CLCN2-220ENST00000637538 SSBP3-AS1Q7Z2R9 100 aa9.83□□□□□ -0.84
CLCN2-220ENST00000637538 CXCL6P80162 114 aa9.82□□□□□ -0.84
CLCN2-220ENST00000637538 FAM236AA0A1B0GUQ0 79 aa9.82□□□□□ -0.84
CLCN2-220ENST00000637538 FAM236BA0A1B0GV22 79 aa9.82□□□□□ -0.84
CLCN2-220ENST00000637538 DMBT1Q9UGM3 2413 aaPredicted RBP9.8□□□□□ -0.84
CLCN2-220ENST00000637538 HIST1H4AP62805 103 aaKnown RBP9.8□□□□□ -0.84
CLCN2-220ENST00000637538 NREPQ16612 68 aa9.79□□□□□ -0.84
CLCN2-220ENST00000637538 PRR26Q8N8Z3 221 aa9.77□□□□□ -0.85
CLCN2-220ENST00000637538 CD164Q04900 197 aa9.76□□□□□ -0.85
CLCN2-220ENST00000637538 FLG2Q5D862 2391 aaPredicted RBP9.75□□□□□ -0.85
CLCN2-220ENST00000637538 A0A087WSZ3 146 aa9.75□□□□□ -0.85
CLCN2-220ENST00000637538 A0A087WVE0 104 aa9.73□□□□□ -0.85
CLCN2-220ENST00000637538 ATOX1O00244 68 aa9.73□□□□□ -0.85
CLCN2-220ENST00000637538 TYMSOSQ8TAI1 123 aa9.73□□□□□ -0.85
CLCN2-220ENST00000637538 HRCT1Q6UXD1 115 aa9.72□□□□□ -0.85
CLCN2-220ENST00000637538 FAT3Q8TDW7 4589 aa9.71□□□□□ -0.86
CLCN2-220ENST00000637538 LRP1Q07954 4544 aaKnown RBP9.71□□□□□ -0.86
CLCN2-220ENST00000637538 BPY2O14599 106 aa9.69□□□□□ -0.86
CLCN2-220ENST00000637538 UQCRQO14949 82 aa9.67□□□□□ -0.86
CLCN2-220ENST00000637538 MYCBP2O75592 4640 aa9.67□□□□□ -0.86
CLCN2-220ENST00000637538 TNXBP22105 4242 aa9.66□□□□□ -0.86
CLCN2-220ENST00000637538 KRTAP10-8P60410 259 aa9.65□□□□□ -0.86
CLCN2-220ENST00000637538 Q5XG85 94 aa9.65□□□□□ -0.86
CLCN2-220ENST00000637538 LINC00472Q9H8W2 130 aa9.65□□□□□ -0.86
CLCN2-220ENST00000637538 SS18L2Q9UHA2 77 aa9.65□□□□□ -0.86
CLCN2-220ENST00000637538 KRTAP29-1A8MX34 341 aaPredicted RBP9.64□□□□□ -0.87
CLCN2-220ENST00000637538 LINC00304Q8N9R0 145 aa9.63□□□□□ -0.87
CLCN2-220ENST00000637538 Q96NJ1 140 aa9.63□□□□□ -0.87
CLCN2-220ENST00000637538 ASB16-AS1Q495Z4 193 aa9.62□□□□□ -0.87
CLCN2-220ENST00000637538 CCDC179H3BU77 68 aa9.61□□□□□ -0.87
CLCN2-220ENST00000637538 SPINK1P00995 79 aa9.61□□□□□ -0.87
CLCN2-220ENST00000637538 OXTP01178 125 aa9.61□□□□□ -0.87
CLCN2-220ENST00000637538 IGKV4-1P06312 121 aa9.61□□□□□ -0.87
CLCN2-220ENST00000637538 SPAG11AQ6PDA7 123 aa9.61□□□□□ -0.87
CLCN2-220ENST00000637538 COX7CP15954 63 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms