RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 LCE6AA0A183 80 aa2.73□□□□□ -1.97
SDCBP-213ENST00000630925 UQCR11O14957 56 aa2.73□□□□□ -1.97
SDCBP-213ENST00000630925 DNAL4O96015 105 aa2.73□□□□□ -1.97
SDCBP-213ENST00000630925 NREPQ16612 68 aa2.73□□□□□ -1.97
SDCBP-213ENST00000630925 TENM2Q9NT68 2774 aa2.73□□□□□ -1.97
SDCBP-213ENST00000630925 CNTRLQ7Z7A1 2325 aa2.73□□□□□ -1.97
SDCBP-213ENST00000630925 COL7A1Q02388 2944 aa2.73□□□□□ -1.97
SDCBP-213ENST00000630925 HERC1Q15751 4861 aa2.73□□□□□ -1.97
SDCBP-213ENST00000630925 KIAA1109Q2LD37 5005 aa2.73□□□□□ -1.97
SDCBP-213ENST00000630925 SEC16AO15027 2179 aa2.72□□□□□ -1.97
SDCBP-213ENST00000630925 KRTAP29-1A8MX34 341 aaPredicted RBP2.72□□□□□ -1.97
SDCBP-213ENST00000630925 SPINK14Q6IE38 97 aa2.72□□□□□ -1.97
SDCBP-213ENST00000630925 A0A1W2PNN7 141 aa2.72□□□□□ -1.97
SDCBP-213ENST00000630925 PIN1P1O15428 100 aa2.72□□□□□ -1.97
SDCBP-213ENST00000630925 MGPP08493 103 aa2.72□□□□□ -1.97
SDCBP-213ENST00000630925 FCER1GP30273 86 aa2.72□□□□□ -1.97
SDCBP-213ENST00000630925 SPATA8Q6RVD6 105 aa2.72□□□□□ -1.97
SDCBP-213ENST00000630925 V9GYV3 84 aa2.72□□□□□ -1.97
SDCBP-213ENST00000630925 IGKV2-40A0A087WW87 121 aaPredicted RBP2.71□□□□□ -1.98
SDCBP-213ENST00000630925 TRAV21A0A0B4J279 112 aa2.71□□□□□ -1.98
SDCBP-213ENST00000630925 IGKV2D-40P01614 121 aaPredicted RBP2.71□□□□□ -1.98
SDCBP-213ENST00000630925 RNASE3P12724 160 aaKnown RBP2.71□□□□□ -1.98
SDCBP-213ENST00000630925 WFDC10AQ9H1F0 79 aa2.71□□□□□ -1.98
SDCBP-213ENST00000630925 NOTCH3Q9UM47 2321 aa2.71□□□□□ -1.98
SDCBP-213ENST00000630925 IGKV3D-15A0A087WSY6 115 aa2.7□□□□□ -1.98
SDCBP-213ENST00000630925 LINC00322Q6ZN03 302 aaPredicted RBP2.7□□□□□ -1.98
SDCBP-213ENST00000630925 TMEM263Q8WUH6 116 aaKnown RBP2.7□□□□□ -1.98
SDCBP-213ENST00000630925 ZCCHC13Q8WW36 166 aaKnown RBP2.7□□□□□ -1.98
SDCBP-213ENST00000630925 LINC00208Q96KT6 92 aa2.7□□□□□ -1.98
SDCBP-213ENST00000630925 OBSCN-AS1Q96MR7 158 aa2.7□□□□□ -1.98
SDCBP-213ENST00000630925 KLK9Q9UKQ9 250 aa2.7□□□□□ -1.98
SDCBP-213ENST00000630925 CTXND1A0A1B0GTU2 59 aa2.7□□□□□ -1.98
SDCBP-213ENST00000630925 H0Y9P7 68 aa2.7□□□□□ -1.98
SDCBP-213ENST00000630925 NDUFB1O75438 58 aa2.7□□□□□ -1.98
SDCBP-213ENST00000630925 FXYD3Q14802 87 aa2.7□□□□□ -1.98
SDCBP-213ENST00000630925 DNAH9Q9NYC9 4486 aa2.69□□□□□ -1.98
SDCBP-213ENST00000630925 TRAV40A0A0B4J280 105 aa2.69□□□□□ -1.98
SDCBP-213ENST00000630925 LINC00472Q9H8W2 130 aa2.69□□□□□ -1.98
SDCBP-213ENST00000630925 ABCA1O95477 2261 aa2.69□□□□□ -1.98
SDCBP-213ENST00000630925 ENHOQ6UWT2 76 aa2.69□□□□□ -1.98
SDCBP-213ENST00000630925 LINC00304Q8N9R0 145 aa2.69□□□□□ -1.98
SDCBP-213ENST00000630925 TTTY10Q9BZA0 68 aa2.69□□□□□ -1.98
SDCBP-213ENST00000630925 IGKV2-29A2NJV5 120 aaPredicted RBP2.68□□□□□ -1.98
SDCBP-213ENST00000630925 RPL37AP61513 92 aaKnown RBP2.68□□□□□ -1.98
SDCBP-213ENST00000630925 C5orf56Q8N8D9 126 aa2.68□□□□□ -1.98
SDCBP-213ENST00000630925 Q96NJ1 140 aa2.68□□□□□ -1.98
SDCBP-213ENST00000630925 LYSTQ99698 3801 aa2.68□□□□□ -1.98
SDCBP-213ENST00000630925 TXNDC17Q9BRA2 123 aa2.68□□□□□ -1.98
SDCBP-213ENST00000630925 SMIM27A0A1W2PRY6 76 aa2.67□□□□□ -1.98
SDCBP-213ENST00000630925 RPS27P42677 84 aaKnown RBP2.67□□□□□ -1.98
SDCBP-213ENST00000630925 FXYD6P3P58550 94 aa2.67□□□□□ -1.98
SDCBP-213ENST00000630925 KRTAP5-11Q6L8G4 156 aa2.67□□□□□ -1.98
SDCBP-213ENST00000630925 TRGV4A0A0C4DH28 118 aa2.67□□□□□ -1.98
SDCBP-213ENST00000630925 H3BSH0 61 aa2.66□□□□□ -1.98
SDCBP-213ENST00000630925 C10orf55Q5SWW7 151 aa2.66□□□□□ -1.98
SDCBP-213ENST00000630925 C10orf113Q5VZT2 155 aa2.66□□□□□ -1.98
SDCBP-213ENST00000630925 KRTAP11-1Q8IUC1 163 aa2.66□□□□□ -1.98
SDCBP-213ENST00000630925 FRAS1Q86XX4 4008 aa2.66□□□□□ -1.98
SDCBP-213ENST00000630925 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.65□□□□□ -1.98
SDCBP-213ENST00000630925 TRBV6-1A0A0K0K1D8 114 aa2.65□□□□□ -1.98
SDCBP-213ENST00000630925 CSMD3Q7Z407 3707 aa2.65□□□□□ -1.98
SDCBP-213ENST00000630925 A0A096LNT2 108 aa2.65□□□□□ -1.99
SDCBP-213ENST00000630925 LOC110117498A0A087WWA1 95 aa2.64□□□□□ -1.99
SDCBP-213ENST00000630925 TRGV1A0A0A0MS02 117 aa2.64□□□□□ -1.99
SDCBP-213ENST00000630925 LINC00959A0A1B0GUT2 108 aa2.64□□□□□ -1.99
SDCBP-213ENST00000630925 IGKV4-1P06312 121 aa2.64□□□□□ -1.99
SDCBP-213ENST00000630925 WFDC9Q8NEX5 89 aa2.64□□□□□ -1.99
SDCBP-213ENST00000630925 CCL19Q99731 98 aa2.64□□□□□ -1.99
SDCBP-213ENST00000630925 FXYD4P59646 89 aa2.63□□□□□ -1.99
SDCBP-213ENST00000630925 ROS1P08922 2347 aa2.62□□□□□ -1.99
SDCBP-213ENST00000630925 MRPL33O75394 65 aaKnown RBP2.62□□□□□ -1.99
SDCBP-213ENST00000630925 LINC00315P59091 139 aa2.62□□□□□ -1.99
SDCBP-213ENST00000630925 LINC01590Q5TEZ4 76 aa2.62□□□□□ -1.99
SDCBP-213ENST00000630925 UBL5Q9BZL1 73 aa2.62□□□□□ -1.99
SDCBP-213ENST00000630925 ALPK2Q86TB3 2170 aa2.62□□□□□ -1.99
SDCBP-213ENST00000630925 FREM1Q5H8C1 2179 aa2.62□□□□□ -1.99
SDCBP-213ENST00000630925 IGLV6-57P01721 117 aa2.62□□□□□ -1.99
SDCBP-213ENST00000630925 PRB2P02812 416 aaPredicted RBP2.62□□□□□ -1.99
SDCBP-213ENST00000630925 SERF2P84101 59 aa2.62□□□□□ -1.99
SDCBP-213ENST00000630925 ZNF625Q96I27 306 aaPredicted RBP2.62□□□□□ -1.99
SDCBP-213ENST00000630925 HECTD4Q9Y4D8 3996 aa2.62□□□□□ -1.99
SDCBP-213ENST00000630925 KRTAP5-2Q701N4 177 aa2.61□□□□□ -1.99
SDCBP-213ENST00000630925 DNAH3Q8TD57 4116 aa2.61□□□□□ -1.99
SDCBP-213ENST00000630925 TRGV2A0A075B6R0 118 aa2.61□□□□□ -1.99
SDCBP-213ENST00000630925 IGIPA6NJ69 53 aa2.61□□□□□ -1.99
SDCBP-213ENST00000630925 IGKV3-15P01624 115 aa2.61□□□□□ -1.99
SDCBP-213ENST00000630925 PLNP26678 52 aa2.61□□□□□ -1.99
SDCBP-213ENST00000630925 KRTAP10-8P60410 259 aa2.61□□□□□ -1.99
SDCBP-213ENST00000630925 COX17Q14061 63 aa2.61□□□□□ -1.99
SDCBP-213ENST00000630925 GAFA1Q96PS6 74 aa2.61□□□□□ -1.99
SDCBP-213ENST00000630925 TMEM14CQ9P0S9 112 aa2.61□□□□□ -1.99
SDCBP-213ENST00000630925 INE1O15225 51 aa2.6□□□□□ -1.99
SDCBP-213ENST00000630925 DEFB112Q30KQ8 113 aa2.6□□□□□ -1.99
SDCBP-213ENST00000630925 Q8N9L7 120 aa2.6□□□□□ -1.99
SDCBP-213ENST00000630925 H3BRN7 92 aa2.59□□□□□ -1.99
SDCBP-213ENST00000630925 DSCR10P59022 87 aa2.59□□□□□ -1.99
SDCBP-213ENST00000630925 STAB2Q8WWQ8 2551 aa2.59□□□□□ -1.99
SDCBP-213ENST00000630925 DEFB108AA8MXU0 73 aa2.59□□□□□ -2
SDCBP-213ENST00000630925 LINC01546A6NGU7 62 aa2.58□□□□□ -2
SDCBP-213ENST00000630925 M0R1W7 72 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms