RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 CXCL6P80162 114 aa7.88□□□□□ -1.15
SYNGAP1-207ENST00000628646 PLA2G1BP04054 148 aaKnown RBP7.88□□□□□ -1.15
SYNGAP1-207ENST00000628646 ZNF706Q9Y5V0 76 aaPredicted RBP7.87□□□□□ -1.15
SYNGAP1-207ENST00000628646 FAM236DA0A1B0GTK5 79 aa7.86□□□□□ -1.15
SYNGAP1-207ENST00000628646 FAM236CP0DP71 79 aa7.86□□□□□ -1.15
SYNGAP1-207ENST00000628646 SPACA4Q8TDM5 124 aa7.86□□□□□ -1.15
SYNGAP1-207ENST00000628646 FAM30AQ9NZY2 134 aa7.86□□□□□ -1.15
SYNGAP1-207ENST00000628646 C4orf48Q5BLP8 95 aa7.85□□□□□ -1.15
SYNGAP1-207ENST00000628646 LINC01547P58512 204 aaPredicted RBP7.85□□□□□ -1.15
SYNGAP1-207ENST00000628646 BCE1O60756 84 aa7.84□□□□□ -1.15
SYNGAP1-207ENST00000628646 PLECQ15149 4684 aaKnown RBP7.84□□□□□ -1.15
SYNGAP1-207ENST00000628646 NDUFB1O75438 58 aa7.83□□□□□ -1.16
SYNGAP1-207ENST00000628646 PANO1I0J062 215 aa7.83□□□□□ -1.16
SYNGAP1-207ENST00000628646 KRTAP7-1Q8IUC3 87 aa7.83□□□□□ -1.16
SYNGAP1-207ENST00000628646 PSORS1C2Q9UIG4 136 aa7.83□□□□□ -1.16
SYNGAP1-207ENST00000628646 A0A087WVE0 104 aa7.83□□□□□ -1.16
SYNGAP1-207ENST00000628646 TRBV7-4A0A0J9YYF1 115 aa7.83□□□□□ -1.16
SYNGAP1-207ENST00000628646 IGLV9-49A0A0B4J1Y8 123 aa7.82□□□□□ -1.16
SYNGAP1-207ENST00000628646 EPM2AB3EWF7 344 aa7.82□□□□□ -1.16
SYNGAP1-207ENST00000628646 Q9BRP9 147 aa7.81□□□□□ -1.16
SYNGAP1-207ENST00000628646 TRAV7A0A075B6U4 112 aa7.8□□□□□ -1.16
SYNGAP1-207ENST00000628646 PLAC8Q9NZF1 115 aa7.8□□□□□ -1.16
SYNGAP1-207ENST00000628646 Q8NBF4 154 aa7.79□□□□□ -1.16
SYNGAP1-207ENST00000628646 NDUFS5O43920 106 aa7.79□□□□□ -1.16
SYNGAP1-207ENST00000628646 Q8N377 158 aa7.79□□□□□ -1.16
SYNGAP1-207ENST00000628646 C1orf195Q5TG92 126 aa7.78□□□□□ -1.16
SYNGAP1-207ENST00000628646 KRTAP4-16G5E9R7 235 aaPredicted RBP7.78□□□□□ -1.16
SYNGAP1-207ENST00000628646 CYSTM1Q9H1C7 97 aa7.78□□□□□ -1.16
SYNGAP1-207ENST00000628646 C20orf197Q8N268 126 aa7.77□□□□□ -1.17
SYNGAP1-207ENST00000628646 ST20-AS1Q8NBB2 130 aa7.76□□□□□ -1.17
SYNGAP1-207ENST00000628646 SPRR1AP35321 89 aa7.76□□□□□ -1.17
SYNGAP1-207ENST00000628646 IGLV7-43P04211 117 aa7.75□□□□□ -1.17
SYNGAP1-207ENST00000628646 NDUFC1O43677 76 aa7.74□□□□□ -1.17
SYNGAP1-207ENST00000628646 ZNF861PO60384 105 aa7.74□□□□□ -1.17
SYNGAP1-207ENST00000628646 DMBT1Q9UGM3 2413 aaPredicted RBP7.74□□□□□ -1.17
SYNGAP1-207ENST00000628646 STARD9Q9P2P6 4700 aa7.74□□□□□ -1.17
SYNGAP1-207ENST00000628646 IGLV5-48A0A075B6I7 105 aa7.74□□□□□ -1.17
SYNGAP1-207ENST00000628646 CRYGAP11844 174 aa7.73□□□□□ -1.17
SYNGAP1-207ENST00000628646 TMEM258P61165 79 aa7.73□□□□□ -1.17
SYNGAP1-207ENST00000628646 MP68P56378 58 aa7.73□□□□□ -1.17
SYNGAP1-207ENST00000628646 VPS13DQ5THJ4 4388 aa7.72□□□□□ -1.17
SYNGAP1-207ENST00000628646 Q5VSD8 79 aa7.72□□□□□ -1.17
SYNGAP1-207ENST00000628646 A0A087WSZ3 146 aa7.71□□□□□ -1.18
SYNGAP1-207ENST00000628646 H0Y9J4 135 aa7.71□□□□□ -1.18
SYNGAP1-207ENST00000628646 MPLKIPQ8TAP9 179 aa7.7□□□□□ -1.18
SYNGAP1-207ENST00000628646 J3QL48 77 aa7.7□□□□□ -1.18
SYNGAP1-207ENST00000628646 HECTD4Q9Y4D8 3996 aa7.7□□□□□ -1.18
SYNGAP1-207ENST00000628646 ANAPC11Q9NYG5 84 aa7.69□□□□□ -1.18
SYNGAP1-207ENST00000628646 DNAH2Q9P225 4427 aa7.68□□□□□ -1.18
SYNGAP1-207ENST00000628646 ERC2-IT1O76042 136 aa7.67□□□□□ -1.18
SYNGAP1-207ENST00000628646 MOBPQ13875 183 aa7.66□□□□□ -1.18
SYNGAP1-207ENST00000628646 ATP5EP56381 51 aaPredicted RBP7.65□□□□□ -1.18
SYNGAP1-207ENST00000628646 TYMSOSQ8TAI1 123 aa7.65□□□□□ -1.18
SYNGAP1-207ENST00000628646 A0A1B0GVY2 172 aa7.65□□□□□ -1.19
SYNGAP1-207ENST00000628646 KMT2AQ03164 3969 aa7.65□□□□□ -1.19
SYNGAP1-207ENST00000628646 PRO0628Q9UI54 55 aa7.64□□□□□ -1.19
SYNGAP1-207ENST00000628646 A0A1W2PNM2 257 aa7.64□□□□□ -1.19
SYNGAP1-207ENST00000628646 PRR4Q16378 134 aa7.63□□□□□ -1.19
SYNGAP1-207ENST00000628646 IGFL1Q6UW32 110 aa7.63□□□□□ -1.19
SYNGAP1-207ENST00000628646 Q8N9L7 120 aa7.62□□□□□ -1.19
SYNGAP1-207ENST00000628646 HCG22E2RYF7 251 aa7.62□□□□□ -1.19
SYNGAP1-207ENST00000628646 WFDC13Q8IUB5 93 aa7.62□□□□□ -1.19
SYNGAP1-207ENST00000628646 SPINK6Q6UWN8 80 aa7.61□□□□□ -1.19
SYNGAP1-207ENST00000628646 SPRR4Q96PI1 79 aa7.61□□□□□ -1.19
SYNGAP1-207ENST00000628646 Q6ZSA8 131 aa7.6□□□□□ -1.19
SYNGAP1-207ENST00000628646 SNURFQ9Y675 71 aa7.6□□□□□ -1.19
SYNGAP1-207ENST00000628646 SMIM29Q86T20 159 aa7.6□□□□□ -1.19
SYNGAP1-207ENST00000628646 KRTAP11-1Q8IUC1 163 aa7.6□□□□□ -1.19
SYNGAP1-207ENST00000628646 FRAS1Q86XX4 4008 aa7.59□□□□□ -1.19
SYNGAP1-207ENST00000628646 TMEM254Q8TBM7 123 aa7.59□□□□□ -1.19
SYNGAP1-207ENST00000628646 DNAH8Q96JB1 4490 aa7.59□□□□□ -1.19
SYNGAP1-207ENST00000628646 SRRM2Q9UQ35 2752 aaKnown RBP7.58□□□□□ -1.2
SYNGAP1-207ENST00000628646 SPRR1BP22528 89 aa7.58□□□□□ -1.2
SYNGAP1-207ENST00000628646 DNAH17Q9UFH2 4485 aa7.58□□□□□ -1.2
SYNGAP1-207ENST00000628646 IGKV4-1P06312 121 aa7.58□□□□□ -1.2
SYNGAP1-207ENST00000628646 CASC2Q6XLA1 102 aa7.58□□□□□ -1.2
SYNGAP1-207ENST00000628646 IGLV8-61A0A075B6I0 122 aa7.56□□□□□ -1.2
SYNGAP1-207ENST00000628646 PRR26Q8N8Z3 221 aa7.56□□□□□ -1.2
SYNGAP1-207ENST00000628646 DEFB116Q30KQ4 102 aa7.55□□□□□ -1.2
SYNGAP1-207ENST00000628646 SPTSSBQ8NFR3 76 aa7.55□□□□□ -1.2
SYNGAP1-207ENST00000628646 ALMS1Q8TCU4 4167 aa7.55□□□□□ -1.2
SYNGAP1-207ENST00000628646 Q8N1X5 172 aa7.54□□□□□ -1.2
SYNGAP1-207ENST00000628646 OXTP01178 125 aa7.53□□□□□ -1.2
SYNGAP1-207ENST00000628646 A8MWP4 228 aa7.52□□□□□ -1.21
SYNGAP1-207ENST00000628646 RPS28P62857 69 aaKnown RBP7.52□□□□□ -1.21
SYNGAP1-207ENST00000628646 K7EQZ3 153 aa7.51□□□□□ -1.21
SYNGAP1-207ENST00000628646 KLKP1Q107X0 134 aa7.51□□□□□ -1.21
SYNGAP1-207ENST00000628646 SSBP3-AS1Q7Z2R9 100 aa7.51□□□□□ -1.21
SYNGAP1-207ENST00000628646 LINC00304Q8N9R0 145 aa7.51□□□□□ -1.21
SYNGAP1-207ENST00000628646 SERP1Q9Y6X1 66 aa7.51□□□□□ -1.21
SYNGAP1-207ENST00000628646 A0A0G2JQZ4 141 aa7.5□□□□□ -1.21
SYNGAP1-207ENST00000628646 H7BZZ5 65 aa7.5□□□□□ -1.21
SYNGAP1-207ENST00000628646 H3BPC8 53 aa7.49□□□□□ -1.21
SYNGAP1-207ENST00000628646 PRR15Q8IV56 129 aa7.49□□□□□ -1.21
SYNGAP1-207ENST00000628646 LIMD2Q9BT23 127 aa7.48□□□□□ -1.21
SYNGAP1-207ENST00000628646 OCR1Q9BZK8 76 aa7.48□□□□□ -1.21
SYNGAP1-207ENST00000628646 TP53AIP1Q9HCN2 124 aa7.48□□□□□ -1.21
SYNGAP1-207ENST00000628646 DNAH6Q9C0G6 4158 aa7.48□□□□□ -1.21
SYNGAP1-207ENST00000628646 LINC00208Q96KT6 92 aa7.47□□□□□ -1.21
SYNGAP1-207ENST00000628646 IGHV6-1A0A0B4J1U7 121 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms