RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 LINC00476Q8WZB0 136 aa12.22□□□□□ -0.45
CHRNA4-209ENST00000627000 SMIM29Q86T20 159 aa12.22□□□□□ -0.45
CHRNA4-209ENST00000627000 EPM2AB3EWF7 344 aa12.21□□□□□ -0.45
CHRNA4-209ENST00000627000 HAMPP81172 84 aa12.2□□□□□ -0.46
CHRNA4-209ENST00000627000 C1orf137Q5JT78 98 aa12.18□□□□□ -0.46
CHRNA4-209ENST00000627000 DNAH6Q9C0G6 4158 aa12.17□□□□□ -0.46
CHRNA4-209ENST00000627000 TRAV7A0A075B6U4 112 aa12.17□□□□□ -0.46
CHRNA4-209ENST00000627000 C3orf84H3BNL1 204 aa12.17□□□□□ -0.46
CHRNA4-209ENST00000627000 A0A1W2PNM2 257 aa12.16□□□□□ -0.46
CHRNA4-209ENST00000627000 IGLV5-52A0A0A0MRZ9 124 aa12.16□□□□□ -0.46
CHRNA4-209ENST00000627000 UBE2AP49459 152 aa12.16□□□□□ -0.46
CHRNA4-209ENST00000627000 H0Y9J4 135 aa12.15□□□□□ -0.46
CHRNA4-209ENST00000627000 CXCL6P80162 114 aa12.14□□□□□ -0.47
CHRNA4-209ENST00000627000 SCXQ7RTU7 201 aa12.14□□□□□ -0.47
CHRNA4-209ENST00000627000 A0A0G2JQZ4 141 aa12.13□□□□□ -0.47
CHRNA4-209ENST00000627000 SRRM2Q9UQ35 2752 aaKnown RBP12.13□□□□□ -0.47
CHRNA4-209ENST00000627000 C20orf197Q8N268 126 aa12.12□□□□□ -0.47
CHRNA4-209ENST00000627000 HYDINQ4G0P3 5121 aa12.12□□□□□ -0.47
CHRNA4-209ENST00000627000 ALMS1Q8TCU4 4167 aa12.12□□□□□ -0.47
CHRNA4-209ENST00000627000 FAM236DA0A1B0GTK5 79 aa12.11□□□□□ -0.47
CHRNA4-209ENST00000627000 FAM236CP0DP71 79 aa12.11□□□□□ -0.47
CHRNA4-209ENST00000627000 KRTAP13-1Q8IUC0 172 aa12.11□□□□□ -0.47
CHRNA4-209ENST00000627000 F8WEM9 126 aa12.1□□□□□ -0.47
CHRNA4-209ENST00000627000 Q8NBF4 154 aa12.1□□□□□ -0.47
CHRNA4-209ENST00000627000 DNAH8Q96JB1 4490 aa12.1□□□□□ -0.47
CHRNA4-209ENST00000627000 NREPQ16612 68 aa12.08□□□□□ -0.48
CHRNA4-209ENST00000627000 PLAC8Q9NZF1 115 aa12.08□□□□□ -0.48
CHRNA4-209ENST00000627000 FRAS1Q86XX4 4008 aa12.08□□□□□ -0.48
CHRNA4-209ENST00000627000 IGFL1Q6UW32 110 aa12.07□□□□□ -0.48
CHRNA4-209ENST00000627000 SERP1Q9Y6X1 66 aa12.06□□□□□ -0.48
CHRNA4-209ENST00000627000 SPRR1BP22528 89 aa12.05□□□□□ -0.48
CHRNA4-209ENST00000627000 KRTAP10-2P60368 255 aa12.05□□□□□ -0.48
CHRNA4-209ENST00000627000 KLKP1Q107X0 134 aa12.05□□□□□ -0.48
CHRNA4-209ENST00000627000 SPRR4Q96PI1 79 aa12.05□□□□□ -0.48
CHRNA4-209ENST00000627000 DNAH11Q96DT5 4516 aa12.05□□□□□ -0.48
CHRNA4-209ENST00000627000 DNAH5Q8TE73 4624 aa12.05□□□□□ -0.48
CHRNA4-209ENST00000627000 OXTP01178 125 aa12.05□□□□□ -0.48
CHRNA4-209ENST00000627000 IGLV8-61A0A075B6I0 122 aa12.03□□□□□ -0.48
CHRNA4-209ENST00000627000 PSORS1C2Q9UIG4 136 aa12.03□□□□□ -0.48
CHRNA4-209ENST00000627000 NDUFC1O43677 76 aa12.03□□□□□ -0.48
CHRNA4-209ENST00000627000 A0A1B0GW54 56 aa12.01□□□□□ -0.49
CHRNA4-209ENST00000627000 Q8N9L7 120 aa12.01□□□□□ -0.49
CHRNA4-209ENST00000627000 H7BZZ5 65 aa12.01□□□□□ -0.49
CHRNA4-209ENST00000627000 ATP5EP56381 51 aaPredicted RBP11.99□□□□□ -0.49
CHRNA4-209ENST00000627000 Q5XG85 94 aa11.99□□□□□ -0.49
CHRNA4-209ENST00000627000 BPY2O14599 106 aa11.98□□□□□ -0.49
CHRNA4-209ENST00000627000 FAM30AQ9NZY2 134 aa11.98□□□□□ -0.49
CHRNA4-209ENST00000627000 FAT2Q9NYQ8 4349 aa11.96□□□□□ -0.5
CHRNA4-209ENST00000627000 C4orf26Q17RF5 130 aa11.95□□□□□ -0.5
CHRNA4-209ENST00000627000 IGKV4-1P06312 121 aa11.95□□□□□ -0.5
CHRNA4-209ENST00000627000 PKD1P98161 4303 aa11.93□□□□□ -0.5
CHRNA4-209ENST00000627000 HRCT1Q6UXD1 115 aa11.92□□□□□ -0.5
CHRNA4-209ENST00000627000 A0A087WSZ3 146 aa11.92□□□□□ -0.5
CHRNA4-209ENST00000627000 CIRBP-AS1Q8TBR5 109 aa11.91□□□□□ -0.5
CHRNA4-209ENST00000627000 ZNF861PO60384 105 aa11.9□□□□□ -0.5
CHRNA4-209ENST00000627000 SNURFQ9Y675 71 aa11.9□□□□□ -0.5
CHRNA4-209ENST00000627000 SMIM26A0A096LP01 95 aa11.89□□□□□ -0.51
CHRNA4-209ENST00000627000 KRTAP10-1P60331 282 aa11.89□□□□□ -0.51
CHRNA4-209ENST00000627000 IGLV9-49A0A0B4J1Y8 123 aa11.88□□□□□ -0.51
CHRNA4-209ENST00000627000 LINC00483Q53H64 154 aa11.88□□□□□ -0.51
CHRNA4-209ENST00000627000 DSCR10P59022 87 aa11.87□□□□□ -0.51
CHRNA4-209ENST00000627000 ANAPC11Q9NYG5 84 aa11.87□□□□□ -0.51
CHRNA4-209ENST00000627000 SACSQ9NZJ4 4579 aa11.87□□□□□ -0.51
CHRNA4-209ENST00000627000 DEFB116Q30KQ4 102 aa11.86□□□□□ -0.51
CHRNA4-209ENST00000627000 IGLV7-43P04211 117 aa11.84□□□□□ -0.51
CHRNA4-209ENST00000627000 ZNF706Q9Y5V0 76 aaPredicted RBP11.84□□□□□ -0.51
CHRNA4-209ENST00000627000 Q6ZSA8 131 aa11.83□□□□□ -0.52
CHRNA4-209ENST00000627000 TMEM254Q8TBM7 123 aa11.83□□□□□ -0.52
CHRNA4-209ENST00000627000 K7EQZ3 153 aa11.82□□□□□ -0.52
CHRNA4-209ENST00000627000 LRP1BQ9NZR2 4599 aa11.78□□□□□ -0.52
CHRNA4-209ENST00000627000 MOBPQ13875 183 aa11.77□□□□□ -0.53
CHRNA4-209ENST00000627000 RPL37AP61513 92 aaKnown RBP11.75□□□□□ -0.53
CHRNA4-209ENST00000627000 PRO0628Q9UI54 55 aa11.75□□□□□ -0.53
CHRNA4-209ENST00000627000 OCR1Q9BZK8 76 aa11.74□□□□□ -0.53
CHRNA4-209ENST00000627000 LINC00472Q9H8W2 130 aa11.73□□□□□ -0.53
CHRNA4-209ENST00000627000 A0A0U1RQV1 116 aa11.72□□□□□ -0.53
CHRNA4-209ENST00000627000 LCE6AA0A183 80 aa11.7□□□□□ -0.54
CHRNA4-209ENST00000627000 FP248Q71RG6 208 aaPredicted RBP11.7□□□□□ -0.54
CHRNA4-209ENST00000627000 PKHD1P08F94 4074 aa11.66□□□□□ -0.54
CHRNA4-209ENST00000627000 HCG22E2RYF7 251 aa11.65□□□□□ -0.54
CHRNA4-209ENST00000627000 LINC00336Q6ZUF6 198 aa11.65□□□□□ -0.54
CHRNA4-209ENST00000627000 Q96NJ1 140 aa11.64□□□□□ -0.55
CHRNA4-209ENST00000627000 WFDC13Q8IUB5 93 aa11.62□□□□□ -0.55
CHRNA4-209ENST00000627000 A8MWP4 228 aa11.62□□□□□ -0.55
CHRNA4-209ENST00000627000 PRR15Q8IV56 129 aa11.61□□□□□ -0.55
CHRNA4-209ENST00000627000 VPS13BQ7Z7G8 4022 aa11.59□□□□□ -0.55
CHRNA4-209ENST00000627000 RYR2Q92736 4967 aa11.58□□□□□ -0.55
CHRNA4-209ENST00000627000 DYNC1H1Q14204 4646 aaKnown RBP11.58□□□□□ -0.56
CHRNA4-209ENST00000627000 A0A087X002 238 aa11.57□□□□□ -0.56
CHRNA4-209ENST00000627000 A0A1B0GVY2 172 aa11.55□□□□□ -0.56
CHRNA4-209ENST00000627000 KRTAP29-1A8MX34 341 aaPredicted RBP11.55□□□□□ -0.56
CHRNA4-209ENST00000627000 KRTAP13-2Q52LG2 175 aa11.54□□□□□ -0.56
CHRNA4-209ENST00000627000 KMT2CQ8NEZ4 4911 aaKnown RBP11.52□□□□□ -0.57
CHRNA4-209ENST00000627000 CASC2Q6XLA1 102 aa11.52□□□□□ -0.57
CHRNA4-209ENST00000627000 SSBP3-AS1Q7Z2R9 100 aa11.52□□□□□ -0.57
CHRNA4-209ENST00000627000 KRTAP1-4P0C5Y4 121 aa11.5□□□□□ -0.57
CHRNA4-209ENST00000627000 NDUFB1O75438 58 aa11.5□□□□□ -0.57
CHRNA4-209ENST00000627000 FAM229BQ4G0N7 80 aa11.5□□□□□ -0.57
CHRNA4-209ENST00000627000 MPLKIPQ8TAP9 179 aa11.5□□□□□ -0.57
CHRNA4-209ENST00000627000 MMP24-AS1A0A0U1RRL7 71 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms