RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 Q5W150 140 aa1.52□□□□□ -2.17
CDKL5-208ENST00000624953 FAM104BQ5XKR9 115 aa1.52□□□□□ -2.17
CDKL5-208ENST00000624953 IGFL1Q6UW32 110 aa1.52□□□□□ -2.17
CDKL5-208ENST00000624953 TMEM136Q6ZRR5 245 aa1.52□□□□□ -2.17
CDKL5-208ENST00000624953 AMN1Q8IY45 258 aa1.52□□□□□ -2.17
CDKL5-208ENST00000624953 COPS9Q8WXC6 57 aa1.52□□□□□ -2.17
CDKL5-208ENST00000624953 PLEKHB2Q96CS7 222 aa1.52□□□□□ -2.17
CDKL5-208ENST00000624953 IGKV2D-26A0A0A0MRZ7 120 aa1.51□□□□□ -2.17
CDKL5-208ENST00000624953 A8MWP4 228 aa1.51□□□□□ -2.17
CDKL5-208ENST00000624953 LINC00587B1AMM8 73 aa1.51□□□□□ -2.17
CDKL5-208ENST00000624953 HIST1H2BKO60814 126 aa1.51□□□□□ -2.17
CDKL5-208ENST00000624953 LEPROTL1O95214 131 aa1.51□□□□□ -2.17
CDKL5-208ENST00000624953 MT2AP02795 61 aa1.51□□□□□ -2.17
CDKL5-208ENST00000624953 MT1FP04733 61 aa1.51□□□□□ -2.17
CDKL5-208ENST00000624953 HIST1H2BJP06899 126 aa1.51□□□□□ -2.17
CDKL5-208ENST00000624953 SCGB1C2P0DMR2 95 aa1.51□□□□□ -2.17
CDKL5-208ENST00000624953 HIST1H2BOP23527 126 aa1.51□□□□□ -2.17
CDKL5-208ENST00000624953 DDTP30046 118 aa1.51□□□□□ -2.17
CDKL5-208ENST00000624953 FCER1GP30273 86 aa1.51□□□□□ -2.17
CDKL5-208ENST00000624953 HIST1H2BBP33778 126 aa1.51□□□□□ -2.17
CDKL5-208ENST00000624953 NDUFA6P56556 154 aa1.51□□□□□ -2.17
CDKL5-208ENST00000624953 HIST1H2BDP58876 126 aa1.51□□□□□ -2.17
CDKL5-208ENST00000624953 HIST1H2BCP62807 126 aa1.51□□□□□ -2.17
CDKL5-208ENST00000624953 HIST2H2BEQ16778 126 aa1.51□□□□□ -2.17
CDKL5-208ENST00000624953 KRTAP19-6Q3LI70 58 aa1.51□□□□□ -2.17
CDKL5-208ENST00000624953 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.51□□□□□ -2.17
CDKL5-208ENST00000624953 MRPL54Q6P161 138 aaKnown RBP1.51□□□□□ -2.17
CDKL5-208ENST00000624953 SFTA2Q6UW10 78 aa1.51□□□□□ -2.17
CDKL5-208ENST00000624953 HIST1H2BHQ93079 126 aa1.51□□□□□ -2.17
CDKL5-208ENST00000624953 TMEM141Q96I45 108 aa1.51□□□□□ -2.17
CDKL5-208ENST00000624953 PRELID3AQ96N28 172 aa1.51□□□□□ -2.17
CDKL5-208ENST00000624953 HIST1H2BNQ99877 126 aa1.51□□□□□ -2.17
CDKL5-208ENST00000624953 HIST1H2BMQ99879 126 aa1.51□□□□□ -2.17
CDKL5-208ENST00000624953 PMCHL2Q9BQD1 86 aa1.51□□□□□ -2.17
CDKL5-208ENST00000624953 TIMM21Q9BVV7 248 aa1.51□□□□□ -2.17
CDKL5-208ENST00000624953 ST20Q9HBF5 79 aa1.51□□□□□ -2.17
CDKL5-208ENST00000624953 LINC01546A6NGU7 62 aa1.5□□□□□ -2.17
CDKL5-208ENST00000624953 A8MUU9 505 aa1.5□□□□□ -2.17
CDKL5-208ENST00000624953 M0R378 163 aa1.5□□□□□ -2.17
CDKL5-208ENST00000624953 HBDP02042 147 aa1.5□□□□□ -2.17
CDKL5-208ENST00000624953 FABP4P15090 132 aa1.5□□□□□ -2.17
CDKL5-208ENST00000624953 PLNP26678 52 aa1.5□□□□□ -2.17
CDKL5-208ENST00000624953 IFI27P40305 119 aaPredicted RBP1.5□□□□□ -2.17
CDKL5-208ENST00000624953 MRPS36P82909 103 aaKnown RBP1.5□□□□□ -2.17
CDKL5-208ENST00000624953 ANKRD29Q8N6D5 301 aa1.5□□□□□ -2.17
CDKL5-208ENST00000624953 Q8N8P6 123 aa1.5□□□□□ -2.17
CDKL5-208ENST00000624953 OR13C6PQ8NH95 151 aa1.5□□□□□ -2.17
CDKL5-208ENST00000624953 SPRR4Q96PI1 79 aa1.5□□□□□ -2.17
CDKL5-208ENST00000624953 C2orf88Q9BSF0 95 aa1.5□□□□□ -2.17
CDKL5-208ENST00000624953 TRAV12-1A0A0B4J245 112 aa1.49□□□□□ -2.17
CDKL5-208ENST00000624953 TMEM223A0PJW6 202 aa1.49□□□□□ -2.17
CDKL5-208ENST00000624953 C9orf92A6NGG3 77 aa1.49□□□□□ -2.17
CDKL5-208ENST00000624953 D6R8Y8 96 aa1.49□□□□□ -2.17
CDKL5-208ENST00000624953 H3BRM9 83 aa1.49□□□□□ -2.17
CDKL5-208ENST00000624953 SCGB1A1P11684 91 aa1.49□□□□□ -2.17
CDKL5-208ENST00000624953 MRPL51Q4U2R6 128 aaKnown RBP1.49□□□□□ -2.17
CDKL5-208ENST00000624953 LINC01545Q5VT33 79 aa1.49□□□□□ -2.17
CDKL5-208ENST00000624953 SPAG11AQ6PDA7 123 aa1.49□□□□□ -2.17
CDKL5-208ENST00000624953 HIST3H2BBQ8N257 126 aa1.49□□□□□ -2.17
CDKL5-208ENST00000624953 C18orf32Q8TCD1 76 aa1.49□□□□□ -2.17
CDKL5-208ENST00000624953 IFI27L1Q96BM0 104 aa1.49□□□□□ -2.17
CDKL5-208ENST00000624953 HIST1H2BLQ99880 126 aa1.49□□□□□ -2.17
CDKL5-208ENST00000624953 VAMP8Q9BV40 100 aa1.49□□□□□ -2.17
CDKL5-208ENST00000624953 SMIM2Q9BVW6 85 aa1.49□□□□□ -2.17
CDKL5-208ENST00000624953 TMEM126AQ9H061 195 aa1.49□□□□□ -2.17
CDKL5-208ENST00000624953 SPANXA1Q9NS26 97 aa1.49□□□□□ -2.17
CDKL5-208ENST00000624953 MDN1Q9NU22 5596 aa1.48□□□□□ -2.17
CDKL5-208ENST00000624953 SYS1-DBNDD2H3BUS1 97 aa1.48□□□□□ -2.17
CDKL5-208ENST00000624953 M0R143 59 aa1.48□□□□□ -2.17
CDKL5-208ENST00000624953 SPINK1P00995 79 aa1.48□□□□□ -2.17
CDKL5-208ENST00000624953 KRTDAPP60985 99 aa1.48□□□□□ -2.17
CDKL5-208ENST00000624953 RPS29P62273 56 aaKnown RBP1.48□□□□□ -2.17
CDKL5-208ENST00000624953 KRTAP20-1Q3LI63 56 aa1.48□□□□□ -2.17
CDKL5-208ENST00000624953 HRCT1Q6UXD1 115 aa1.48□□□□□ -2.17
CDKL5-208ENST00000624953 Q8IZM0 81 aa1.48□□□□□ -2.17
CDKL5-208ENST00000624953 TOMM6Q96B49 74 aa1.48□□□□□ -2.17
CDKL5-208ENST00000624953 SCGB3A1Q96QR1 104 aa1.48□□□□□ -2.17
CDKL5-208ENST00000624953 C12orf57Q99622 126 aa1.48□□□□□ -2.17
CDKL5-208ENST00000624953 TOMM7Q9P0U1 55 aa1.48□□□□□ -2.17
CDKL5-208ENST00000624953 UQCR10Q9UDW1 63 aa1.48□□□□□ -2.17
CDKL5-208ENST00000624953 F8VRH5 84 aa1.47□□□□□ -2.17
CDKL5-208ENST00000624953 DLEU1O43261 78 aa1.47□□□□□ -2.17
CDKL5-208ENST00000624953 ERC2-IT1O76042 136 aa1.47□□□□□ -2.17
CDKL5-208ENST00000624953 SNCGO76070 127 aa1.47□□□□□ -2.17
CDKL5-208ENST00000624953 DPM2O94777 84 aa1.47□□□□□ -2.17
CDKL5-208ENST00000624953 NPYP01303 97 aa1.47□□□□□ -2.17
CDKL5-208ENST00000624953 IGKCP01834 107 aa1.47□□□□□ -2.17
CDKL5-208ENST00000624953 BATFQ16520 125 aa1.47□□□□□ -2.17
CDKL5-208ENST00000624953 LYRM7Q5U5X0 104 aa1.47□□□□□ -2.17
CDKL5-208ENST00000624953 SPANXA2-OT1Q8N9U9 137 aa1.47□□□□□ -2.17
CDKL5-208ENST00000624953 SMCR5Q8TEV8 140 aa1.47□□□□□ -2.17
CDKL5-208ENST00000624953 AMELXQ99217 191 aa1.47□□□□□ -2.17
CDKL5-208ENST00000624953 CDKN2A-AS1Q9UH64 79 aa1.47□□□□□ -2.17
CDKL5-208ENST00000624953 A0A1B0GV90 55 aa1.46□□□□□ -2.18
CDKL5-208ENST00000624953 C3orf79P0CE67 100 aa1.46□□□□□ -2.18
CDKL5-208ENST00000624953 RPL37P61927 97 aaKnown RBP1.46□□□□□ -2.18
CDKL5-208ENST00000624953 SLC25A34Q6PIV7 304 aa1.46□□□□□ -2.18
CDKL5-208ENST00000624953 COX6B2Q6YFQ2 88 aa1.46□□□□□ -2.18
CDKL5-208ENST00000624953 MIR7-3HGQ8N6C7 128 aa1.46□□□□□ -2.18
CDKL5-208ENST00000624953 MIEN1Q9BRT3 115 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms