RNA–Protein interactions for RNA: ENST00000623935.1

SOX9-AS1-217, SOX9 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene SOX9-AS1, Length 1,563 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-217ENST00000623935 ETDBQ3ZM63 59 aa5.28□□□□□ -1.56
SOX9-AS1-217ENST00000623935 C5orf47Q569G3 176 aa5.28□□□□□ -1.56
SOX9-AS1-217ENST00000623935 HIGD2AQ9BW72 106 aa5.28□□□□□ -1.56
SOX9-AS1-217ENST00000623935 RPL37AP61513 92 aaKnown RBP5.27□□□□□ -1.57
SOX9-AS1-217ENST00000623935 PKHD1P08F94 4074 aa5.27□□□□□ -1.57
SOX9-AS1-217ENST00000623935 SMR3BP02814 79 aaPredicted RBP5.26□□□□□ -1.57
SOX9-AS1-217ENST00000623935 IGLV7-43P04211 117 aa5.26□□□□□ -1.57
SOX9-AS1-217ENST00000623935 PPDPFLQ8WWR9 84 aa5.26□□□□□ -1.57
SOX9-AS1-217ENST00000623935 FAM218AQ96MZ4 157 aa5.26□□□□□ -1.57
SOX9-AS1-217ENST00000623935 ZNF861PO60384 105 aa5.25□□□□□ -1.57
SOX9-AS1-217ENST00000623935 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.25□□□□□ -1.57
SOX9-AS1-217ENST00000623935 TEN1Q86WV5 123 aa5.25□□□□□ -1.57
SOX9-AS1-217ENST00000623935 SIGMAR1Q99720 223 aa5.25□□□□□ -1.57
SOX9-AS1-217ENST00000623935 H3BQ85 93 aa5.25□□□□□ -1.57
SOX9-AS1-217ENST00000623935 SMCR5Q8TEV8 140 aa5.25□□□□□ -1.57
SOX9-AS1-217ENST00000623935 Q9BRP9 147 aa5.25□□□□□ -1.57
SOX9-AS1-217ENST00000623935 ORMDL1Q9P0S3 153 aa5.25□□□□□ -1.57
SOX9-AS1-217ENST00000623935 DNAH8Q96JB1 4490 aa5.24□□□□□ -1.57
SOX9-AS1-217ENST00000623935 Q6ZQY7 126 aa5.24□□□□□ -1.57
SOX9-AS1-217ENST00000623935 ZNF706Q9Y5V0 76 aaPredicted RBP5.24□□□□□ -1.57
SOX9-AS1-217ENST00000623935 C9JAW5 83 aa5.23□□□□□ -1.57
SOX9-AS1-217ENST00000623935 KRTAP13-1Q8IUC0 172 aa5.23□□□□□ -1.57
SOX9-AS1-217ENST00000623935 LRP1BQ9NZR2 4599 aa5.23□□□□□ -1.57
SOX9-AS1-217ENST00000623935 TMEM256-PLSCR3K7ERE1 68 aa5.22□□□□□ -1.57
SOX9-AS1-217ENST00000623935 DEFB105AQ8NG35 78 aa5.22□□□□□ -1.57
SOX9-AS1-217ENST00000623935 DYNC1H1Q14204 4646 aaKnown RBP5.22□□□□□ -1.57
SOX9-AS1-217ENST00000623935 BAALC-AS2P0C853 105 aa5.21□□□□□ -1.57
SOX9-AS1-217ENST00000623935 LINC01600Q96MT4 127 aa5.21□□□□□ -1.57
SOX9-AS1-217ENST00000623935 TEX49A0A1B0GTD5 131 aa5.21□□□□□ -1.58
SOX9-AS1-217ENST00000623935 H3BT86 120 aa5.21□□□□□ -1.58
SOX9-AS1-217ENST00000623935 ERC2-IT1O76042 136 aa5.21□□□□□ -1.58
SOX9-AS1-217ENST00000623935 ANKRD29Q8N6D5 301 aa5.21□□□□□ -1.58
SOX9-AS1-217ENST00000623935 PRR26Q8N8Z3 221 aa5.21□□□□□ -1.58
SOX9-AS1-217ENST00000623935 KRTAP23-1A1A580 65 aa5.2□□□□□ -1.58
SOX9-AS1-217ENST00000623935 SPINK6Q6UWN8 80 aa5.2□□□□□ -1.58
SOX9-AS1-217ENST00000623935 Q5VSD8 79 aa5.19□□□□□ -1.58
SOX9-AS1-217ENST00000623935 ST20-AS1Q8NBB2 130 aa5.19□□□□□ -1.58
SOX9-AS1-217ENST00000623935 LAMTOR3Q9UHA4 124 aa5.19□□□□□ -1.58
SOX9-AS1-217ENST00000623935 V9GYY9 64 aa5.19□□□□□ -1.58
SOX9-AS1-217ENST00000623935 IGLV5-48A0A075B6I7 105 aa5.18□□□□□ -1.58
SOX9-AS1-217ENST00000623935 F8WEM9 126 aa5.17□□□□□ -1.58
SOX9-AS1-217ENST00000623935 SPRR4Q96PI1 79 aa5.17□□□□□ -1.58
SOX9-AS1-217ENST00000623935 LCE5AQ5TCM9 118 aa5.16□□□□□ -1.58
SOX9-AS1-217ENST00000623935 Q8N1X5 172 aa5.16□□□□□ -1.58
SOX9-AS1-217ENST00000623935 Q8N377 158 aa5.16□□□□□ -1.58
SOX9-AS1-217ENST00000623935 EPPK1P58107 5090 aaKnown RBP5.16□□□□□ -1.58
SOX9-AS1-217ENST00000623935 APOBP04114 4563 aaKnown RBP5.16□□□□□ -1.58
SOX9-AS1-217ENST00000623935 JMJD7-PLA2G4BH0Y9G9 81 aa5.16□□□□□ -1.58
SOX9-AS1-217ENST00000623935 NDUFV3P56181 108 aaKnown RBP5.16□□□□□ -1.58
SOX9-AS1-217ENST00000623935 SPRR1BP22528 89 aa5.15□□□□□ -1.59
SOX9-AS1-217ENST00000623935 LINC01547P58512 204 aaPredicted RBP5.15□□□□□ -1.59
SOX9-AS1-217ENST00000623935 LINC00483Q53H64 154 aa5.14□□□□□ -1.59
SOX9-AS1-217ENST00000623935 RBM3P98179 157 aaKnown RBP5.13□□□□□ -1.59
SOX9-AS1-217ENST00000623935 FAM240AA0A1B0GVK7 77 aa5.12□□□□□ -1.59
SOX9-AS1-217ENST00000623935 KRTAP10-4P60372 401 aaPredicted RBP5.12□□□□□ -1.59
SOX9-AS1-217ENST00000623935 FAM229BQ4G0N7 80 aa5.12□□□□□ -1.59
SOX9-AS1-217ENST00000623935 C3orf22Q8N5N4 141 aa5.12□□□□□ -1.59
SOX9-AS1-217ENST00000623935 DSCR8Q96T75 97 aa5.12□□□□□ -1.59
SOX9-AS1-217ENST00000623935 IGLV9-49A0A0B4J1Y8 123 aa5.12□□□□□ -1.59
SOX9-AS1-217ENST00000623935 ACYP1P07311 99 aa5.12□□□□□ -1.59
SOX9-AS1-217ENST00000623935 CRYGAP11844 174 aa5.12□□□□□ -1.59
SOX9-AS1-217ENST00000623935 C9orf153Q5TBE3 101 aa5.12□□□□□ -1.59
SOX9-AS1-217ENST00000623935 Q6ZVQ6 151 aa5.12□□□□□ -1.59
SOX9-AS1-217ENST00000623935 SMIM29Q86T20 159 aa5.11□□□□□ -1.59
SOX9-AS1-217ENST00000623935 ANAPC11Q9NYG5 84 aa5.11□□□□□ -1.59
SOX9-AS1-217ENST00000623935 VPS13BQ7Z7G8 4022 aa5.1□□□□□ -1.59
SOX9-AS1-217ENST00000623935 MT-ATP8P03928 68 aa5.1□□□□□ -1.59
SOX9-AS1-217ENST00000623935 PDE6GP18545 87 aa5.1□□□□□ -1.59
SOX9-AS1-217ENST00000623935 Q6JHZ5 121 aa5.1□□□□□ -1.59
SOX9-AS1-217ENST00000623935 RYR1P21817 5038 aa5.09□□□□□ -1.59
SOX9-AS1-217ENST00000623935 KIAA1109Q2LD37 5005 aa5.09□□□□□ -1.59
SOX9-AS1-217ENST00000623935 Q6Q795 121 aa5.09□□□□□ -1.59
SOX9-AS1-217ENST00000623935 Q8NBF4 154 aa5.09□□□□□ -1.59
SOX9-AS1-217ENST00000623935 SRRM2Q9UQ35 2752 aaKnown RBP5.09□□□□□ -1.59
SOX9-AS1-217ENST00000623935 KRTAP1-4P0C5Y4 121 aa5.08□□□□□ -1.6
SOX9-AS1-217ENST00000623935 MOBPQ13875 183 aa5.08□□□□□ -1.6
SOX9-AS1-217ENST00000623935 OBSCN-AS1Q96MR7 158 aa5.08□□□□□ -1.6
SOX9-AS1-217ENST00000623935 C14orf132Q9NPU4 83 aa5.08□□□□□ -1.6
SOX9-AS1-217ENST00000623935 HSPG2P98160 4391 aa5.08□□□□□ -1.6
SOX9-AS1-217ENST00000623935 IGLV8-61A0A075B6I0 122 aa5.08□□□□□ -1.6
SOX9-AS1-217ENST00000623935 SSBP3-AS1Q7Z2R9 100 aa5.08□□□□□ -1.6
SOX9-AS1-217ENST00000623935 TYMSOSQ8TAI1 123 aa5.07□□□□□ -1.6
SOX9-AS1-217ENST00000623935 FAT1Q14517 4588 aa5.06□□□□□ -1.6
SOX9-AS1-217ENST00000623935 LOC110117498A0A087WWA1 95 aa5.06□□□□□ -1.6
SOX9-AS1-217ENST00000623935 A0A087X002 238 aa5.06□□□□□ -1.6
SOX9-AS1-217ENST00000623935 TRBV7-4A0A0J9YYF1 115 aa5.06□□□□□ -1.6
SOX9-AS1-217ENST00000623935 IGFL1Q6UW32 110 aa5.06□□□□□ -1.6
SOX9-AS1-217ENST00000623935 KRTAP9-7A8MTY7 169 aa5.05□□□□□ -1.6
SOX9-AS1-217ENST00000623935 CCKP06307 115 aa5.05□□□□□ -1.6
SOX9-AS1-217ENST00000623935 ANAPC13Q9BS18 74 aa5.05□□□□□ -1.6
SOX9-AS1-217ENST00000623935 Q6ZQT0 140 aa5.04□□□□□ -1.6
SOX9-AS1-217ENST00000623935 SS18L2Q9UHA2 77 aa5.04□□□□□ -1.6
SOX9-AS1-217ENST00000623935 IMUPQ9GZP8 106 aa5.04□□□□□ -1.6
SOX9-AS1-217ENST00000623935 A0A1B0GW54 56 aa5.03□□□□□ -1.6
SOX9-AS1-217ENST00000623935 KRTAP13-2Q52LG2 175 aa5.03□□□□□ -1.6
SOX9-AS1-217ENST00000623935 LINC00643Q86TS7 51 aa5.03□□□□□ -1.6
SOX9-AS1-217ENST00000623935 BIRC6Q9NR09 4857 aa5.02□□□□□ -1.61
SOX9-AS1-217ENST00000623935 TRBV7-7A0A0K0K1E9 115 aa5.02□□□□□ -1.61
SOX9-AS1-217ENST00000623935 CD164Q04900 197 aa5.02□□□□□ -1.61
SOX9-AS1-217ENST00000623935 SPAG11AQ6PDA7 123 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms