RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 MP68P56378 58 aa10.26□□□□□ -0.77
SEMA3B-214ENST00000619119 C6orf48Q9UBA6 75 aa10.26□□□□□ -0.77
SEMA3B-214ENST00000619119 Q75L30 129 aa10.24□□□□□ -0.77
SEMA3B-214ENST00000619119 STAB2Q8WWQ8 2551 aa10.23□□□□□ -0.77
SEMA3B-214ENST00000619119 HUWE1Q7Z6Z7 4374 aaKnown RBP10.23□□□□□ -0.77
SEMA3B-214ENST00000619119 VPREB1P12018 145 aa10.22□□□□□ -0.77
SEMA3B-214ENST00000619119 Q8N377 158 aa10.22□□□□□ -0.77
SEMA3B-214ENST00000619119 MOBPQ13875 183 aa10.21□□□□□ -0.78
SEMA3B-214ENST00000619119 CDC42SE1Q9NRR8 79 aa10.2□□□□□ -0.78
SEMA3B-214ENST00000619119 C1orf137Q5JT78 98 aa10.2□□□□□ -0.78
SEMA3B-214ENST00000619119 PRR34Q9NV39 138 aa10.2□□□□□ -0.78
SEMA3B-214ENST00000619119 H3BNG1 76 aa10.19□□□□□ -0.78
SEMA3B-214ENST00000619119 IGLV5-48A0A075B6I7 105 aa10.18□□□□□ -0.78
SEMA3B-214ENST00000619119 COL7A1Q02388 2944 aa10.17□□□□□ -0.78
SEMA3B-214ENST00000619119 Q8NBF4 154 aa10.16□□□□□ -0.78
SEMA3B-214ENST00000619119 PRAC1Q96KF2 57 aa10.16□□□□□ -0.78
SEMA3B-214ENST00000619119 Q9BRP9 147 aa10.16□□□□□ -0.78
SEMA3B-214ENST00000619119 KCNQ1DNQ9H478 68 aa10.16□□□□□ -0.78
SEMA3B-214ENST00000619119 LOC101927531A0A1B0GV80 90 aa10.15□□□□□ -0.78
SEMA3B-214ENST00000619119 H0Y9P7 68 aa10.14□□□□□ -0.79
SEMA3B-214ENST00000619119 COA5Q86WW8 74 aa10.14□□□□□ -0.79
SEMA3B-214ENST00000619119 CAMK2N2Q96S95 79 aa10.13□□□□□ -0.79
SEMA3B-214ENST00000619119 IGKV2D-24A0A075B6R9 120 aa10.13□□□□□ -0.79
SEMA3B-214ENST00000619119 NKAPP1Q8N9T2 125 aa10.13□□□□□ -0.79
SEMA3B-214ENST00000619119 GVQW2A0A096LPI5 108 aaPredicted RBP10.12□□□□□ -0.79
SEMA3B-214ENST00000619119 SPANXA2-OT1Q8N9U9 137 aa10.12□□□□□ -0.79
SEMA3B-214ENST00000619119 A0A0G2JQZ4 141 aa10.12□□□□□ -0.79
SEMA3B-214ENST00000619119 A0A1W2PNN7 141 aa10.12□□□□□ -0.79
SEMA3B-214ENST00000619119 SPAG11AQ6PDA7 123 aa10.11□□□□□ -0.79
SEMA3B-214ENST00000619119 LYSTQ99698 3801 aa10.11□□□□□ -0.79
SEMA3B-214ENST00000619119 SERTAD4-AS1Q5TG53 156 aa10.1□□□□□ -0.79
SEMA3B-214ENST00000619119 C7orf33Q8WU49 177 aa10.09□□□□□ -0.79
SEMA3B-214ENST00000619119 SPINK7P58062 85 aa10.08□□□□□ -0.8
SEMA3B-214ENST00000619119 LINC01556Q5JQF7 62 aa10.08□□□□□ -0.8
SEMA3B-214ENST00000619119 LINC00313P59037 77 aa10.08□□□□□ -0.8
SEMA3B-214ENST00000619119 TENM2Q9NT68 2774 aa10.07□□□□□ -0.8
SEMA3B-214ENST00000619119 DNAH9Q9NYC9 4486 aa10.07□□□□□ -0.8
SEMA3B-214ENST00000619119 RPL37AP61513 92 aaKnown RBP10.07□□□□□ -0.8
SEMA3B-214ENST00000619119 A0A1B0GW54 56 aa10.06□□□□□ -0.8
SEMA3B-214ENST00000619119 KRTAP26-1Q6PEX3 210 aa10.06□□□□□ -0.8
SEMA3B-214ENST00000619119 SPRR4Q96PI1 79 aa10.05□□□□□ -0.8
SEMA3B-214ENST00000619119 TNP2Q05952 138 aa10.04□□□□□ -0.8
SEMA3B-214ENST00000619119 C15orf56Q8N910 161 aa10.04□□□□□ -0.8
SEMA3B-214ENST00000619119 ADM2Q7Z4H4 148 aa10.04□□□□□ -0.8
SEMA3B-214ENST00000619119 DNAH10OSP0CZ25 163 aa10.03□□□□□ -0.8
SEMA3B-214ENST00000619119 RPL37AP8A6NKH3 93 aa10.02□□□□□ -0.81
SEMA3B-214ENST00000619119 PCOTHQ58A44 107 aa10.01□□□□□ -0.81
SEMA3B-214ENST00000619119 CASC10Q5T4H9 136 aa10.01□□□□□ -0.81
SEMA3B-214ENST00000619119 DNHD1Q96M86 4753 aa10.01□□□□□ -0.81
SEMA3B-214ENST00000619119 C9orf163Q8N9P6 203 aa10□□□□□ -0.81
SEMA3B-214ENST00000619119 CASC2Q6XLA1 102 aa9.99□□□□□ -0.81
SEMA3B-214ENST00000619119 LINC01558Q9Y6Z2 57 aa9.98□□□□□ -0.81
SEMA3B-214ENST00000619119 DHRS4-AS1Q9P1J3 65 aa9.98□□□□□ -0.81
SEMA3B-214ENST00000619119 A0A087WSZ3 146 aa9.97□□□□□ -0.81
SEMA3B-214ENST00000619119 LINC01554Q52M75 96 aa9.97□□□□□ -0.81
SEMA3B-214ENST00000619119 Q6ZRX8 168 aa9.97□□□□□ -0.81
SEMA3B-214ENST00000619119 LINC00476Q8WZB0 136 aa9.97□□□□□ -0.81
SEMA3B-214ENST00000619119 CSMD3Q7Z407 3707 aa9.97□□□□□ -0.81
SEMA3B-214ENST00000619119 H3BPC8 53 aa9.96□□□□□ -0.82
SEMA3B-214ENST00000619119 KRTAP29-1A8MX34 341 aaPredicted RBP9.95□□□□□ -0.82
SEMA3B-214ENST00000619119 DNAH10Q8IVF4 4471 aa9.94□□□□□ -0.82
SEMA3B-214ENST00000619119 PRKDCP78527 4128 aaKnown RBP9.94□□□□□ -0.82
SEMA3B-214ENST00000619119 UBE2DNLQ8IWF7 75 aa9.93□□□□□ -0.82
SEMA3B-214ENST00000619119 IGLV7-46A0A075B6I9 117 aa9.93□□□□□ -0.82
SEMA3B-214ENST00000619119 DNAH7Q8WXX0 4024 aa9.92□□□□□ -0.82
SEMA3B-214ENST00000619119 PLAC8Q9NZF1 115 aa9.91□□□□□ -0.82
SEMA3B-214ENST00000619119 DNAH1Q9P2D7 4330 aa9.91□□□□□ -0.82
SEMA3B-214ENST00000619119 KRTAP1-5Q9BYS1 174 aa9.91□□□□□ -0.82
SEMA3B-214ENST00000619119 MEGF8Q7Z7M0 2845 aa9.9□□□□□ -0.82
SEMA3B-214ENST00000619119 IGFL1Q6UW32 110 aa9.9□□□□□ -0.82
SEMA3B-214ENST00000619119 PLECQ15149 4684 aaKnown RBP9.9□□□□□ -0.83
SEMA3B-214ENST00000619119 CNBPP62633 177 aaKnown RBP9.89□□□□□ -0.83
SEMA3B-214ENST00000619119 IGLV1-50A0A075B6I6 118 aa9.88□□□□□ -0.83
SEMA3B-214ENST00000619119 FAM168BA1KXE4 195 aa9.87□□□□□ -0.83
SEMA3B-214ENST00000619119 APLNQ9ULZ1 77 aa9.87□□□□□ -0.83
SEMA3B-214ENST00000619119 KRTAP4-16G5E9R7 235 aaPredicted RBP9.84□□□□□ -0.83
SEMA3B-214ENST00000619119 STARD9Q9P2P6 4700 aa9.82□□□□□ -0.84
SEMA3B-214ENST00000619119 IGLV5-37A0A075B6J1 123 aa9.82□□□□□ -0.84
SEMA3B-214ENST00000619119 HRES1P13985 223 aa9.81□□□□□ -0.84
SEMA3B-214ENST00000619119 H0Y9J4 135 aa9.8□□□□□ -0.84
SEMA3B-214ENST00000619119 PLA2G1BP04054 148 aaKnown RBP9.78□□□□□ -0.84
SEMA3B-214ENST00000619119 SPRR1AP35321 89 aa9.77□□□□□ -0.85
SEMA3B-214ENST00000619119 DYNC2H1Q8NCM8 4307 aaKnown RBP9.77□□□□□ -0.85
SEMA3B-214ENST00000619119 A0A0A0MQY5 61 aa9.77□□□□□ -0.85
SEMA3B-214ENST00000619119 A8MWP4 228 aa9.77□□□□□ -0.85
SEMA3B-214ENST00000619119 NUPR2A6NF83 97 aa9.76□□□□□ -0.85
SEMA3B-214ENST00000619119 TGP01266 2768 aa9.76□□□□□ -0.85
SEMA3B-214ENST00000619119 IGKV2-24A0A0C4DH68 120 aa9.76□□□□□ -0.85
SEMA3B-214ENST00000619119 TLX1NBP0CAT3 122 aa9.73□□□□□ -0.85
SEMA3B-214ENST00000619119 RETNLBQ9BQ08 111 aa9.73□□□□□ -0.85
SEMA3B-214ENST00000619119 ZNF706Q9Y5V0 76 aaPredicted RBP9.73□□□□□ -0.85
SEMA3B-214ENST00000619119 MMP24-AS1A0A0U1RRL7 71 aa9.72□□□□□ -0.85
SEMA3B-214ENST00000619119 PRLHP81277 87 aa9.72□□□□□ -0.85
SEMA3B-214ENST00000619119 KRTAP7-1Q8IUC3 87 aa9.72□□□□□ -0.85
SEMA3B-214ENST00000619119 FBN3Q75N90 2809 aa9.71□□□□□ -0.85
SEMA3B-214ENST00000619119 NBDYA0A0U1RRE5 68 aa9.71□□□□□ -0.86
SEMA3B-214ENST00000619119 A0A096LNI7 61 aa9.69□□□□□ -0.86
SEMA3B-214ENST00000619119 CSAG1Q6PB30 78 aa9.68□□□□□ -0.86
SEMA3B-214ENST00000619119 REG3GQ6UW15 175 aa9.68□□□□□ -0.86
SEMA3B-214ENST00000619119 KMT2AQ03164 3969 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 146.1 ms