RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 SMIM29Q86T20 159 aa5.73□□□□□ -1.49
VPS11-206ENST00000614944 CHCHD10Q8WYQ3 142 aaPredicted RBP5.73□□□□□ -1.49
VPS11-206ENST00000614944 TOMM7Q9P0U1 55 aa5.73□□□□□ -1.49
VPS11-206ENST00000614944 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.73□□□□□ -1.49
VPS11-206ENST00000614944 HIGD2BQ4VC39 106 aa5.73□□□□□ -1.49
VPS11-206ENST00000614944 NBEAL1Q6ZS30 2694 aa5.72□□□□□ -1.49
VPS11-206ENST00000614944 DNAH6Q9C0G6 4158 aa5.71□□□□□ -1.49
VPS11-206ENST00000614944 DNAH1Q9P2D7 4330 aa5.71□□□□□ -1.5
VPS11-206ENST00000614944 GVQW2A0A096LPI5 108 aaPredicted RBP5.71□□□□□ -1.5
VPS11-206ENST00000614944 ETDCA0A1B0GVM5 59 aa5.71□□□□□ -1.5
VPS11-206ENST00000614944 H3BQ85 93 aa5.71□□□□□ -1.5
VPS11-206ENST00000614944 KLK12Q9UKR0 248 aa5.71□□□□□ -1.5
VPS11-206ENST00000614944 PRKDCP78527 4128 aaKnown RBP5.71□□□□□ -1.5
VPS11-206ENST00000614944 WWC2-AS2Q96NR7 200 aa5.7□□□□□ -1.5
VPS11-206ENST00000614944 TENM3Q9P273 2699 aa5.7□□□□□ -1.5
VPS11-206ENST00000614944 COX17Q14061 63 aa5.69□□□□□ -1.5
VPS11-206ENST00000614944 MGAM2Q2M2H8 2515 aa5.69□□□□□ -1.5
VPS11-206ENST00000614944 A0A087X002 238 aa5.69□□□□□ -1.5
VPS11-206ENST00000614944 LINC00575Q6W349 94 aa5.69□□□□□ -1.5
VPS11-206ENST00000614944 SPANXA2-OT1Q8N9U9 137 aa5.68□□□□□ -1.5
VPS11-206ENST00000614944 C1orf134Q5TEV5 83 aa5.68□□□□□ -1.5
VPS11-206ENST00000614944 SPINK7P58062 85 aa5.67□□□□□ -1.5
VPS11-206ENST00000614944 NBEAL2Q6ZNJ1 2754 aa5.67□□□□□ -1.5
VPS11-206ENST00000614944 C10orf25Q5T742 122 aa5.67□□□□□ -1.5
VPS11-206ENST00000614944 LINC01558Q9Y6Z2 57 aa5.67□□□□□ -1.5
VPS11-206ENST00000614944 NOTCH1P46531 2555 aa5.67□□□□□ -1.5
VPS11-206ENST00000614944 ST20-AS1Q8NBB2 130 aa5.66□□□□□ -1.5
VPS11-206ENST00000614944 ALMS1Q8TCU4 4167 aa5.66□□□□□ -1.5
VPS11-206ENST00000614944 COX7BP24311 80 aa5.66□□□□□ -1.5
VPS11-206ENST00000614944 UBE2DNLQ8IWF7 75 aa5.66□□□□□ -1.5
VPS11-206ENST00000614944 SPAG11BQ08648 103 aa5.65□□□□□ -1.5
VPS11-206ENST00000614944 CLPSL2Q6UWE3 100 aa5.65□□□□□ -1.51
VPS11-206ENST00000614944 C15orf56Q8N910 161 aa5.65□□□□□ -1.51
VPS11-206ENST00000614944 MEGF8Q7Z7M0 2845 aa5.65□□□□□ -1.51
VPS11-206ENST00000614944 NBDYA0A0U1RRE5 68 aa5.64□□□□□ -1.51
VPS11-206ENST00000614944 VPS13DQ5THJ4 4388 aa5.64□□□□□ -1.51
VPS11-206ENST00000614944 COL7A1Q02388 2944 aa5.64□□□□□ -1.51
VPS11-206ENST00000614944 CSAG1Q6PB30 78 aa5.63□□□□□ -1.51
VPS11-206ENST00000614944 Q6ZQY7 126 aa5.63□□□□□ -1.51
VPS11-206ENST00000614944 Q6ZR54 194 aa5.63□□□□□ -1.51
VPS11-206ENST00000614944 TLX1NBP0CAT3 122 aa5.63□□□□□ -1.51
VPS11-206ENST00000614944 A0A1W2PNM2 257 aa5.63□□□□□ -1.51
VPS11-206ENST00000614944 C14orf177Q52M58 125 aa5.63□□□□□ -1.51
VPS11-206ENST00000614944 COA5Q86WW8 74 aa5.63□□□□□ -1.51
VPS11-206ENST00000614944 IGLV10-54A0A075B6I4 117 aa5.62□□□□□ -1.51
VPS11-206ENST00000614944 PLAC8Q9NZF1 115 aa5.62□□□□□ -1.51
VPS11-206ENST00000614944 RTL8CO15255 209 aa5.62□□□□□ -1.51
VPS11-206ENST00000614944 CASC10Q5T4H9 136 aa5.62□□□□□ -1.51
VPS11-206ENST00000614944 IGKV2D-24A0A075B6R9 120 aa5.61□□□□□ -1.51
VPS11-206ENST00000614944 Q6ZRN7 208 aaPredicted RBP5.61□□□□□ -1.51
VPS11-206ENST00000614944 SPAG11AQ6PDA7 123 aa5.61□□□□□ -1.51
VPS11-206ENST00000614944 KRTAP1-5Q9BYS1 174 aa5.61□□□□□ -1.51
VPS11-206ENST00000614944 CNBPP62633 177 aaKnown RBP5.61□□□□□ -1.51
VPS11-206ENST00000614944 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.6□□□□□ -1.51
VPS11-206ENST00000614944 ROMO1P60602 79 aa5.6□□□□□ -1.51
VPS11-206ENST00000614944 KCNQ1DNQ9H478 68 aa5.6□□□□□ -1.51
VPS11-206ENST00000614944 PLA2G2DQ9UNK4 145 aa5.59□□□□□ -1.51
VPS11-206ENST00000614944 STARD9Q9P2P6 4700 aa5.58□□□□□ -1.52
VPS11-206ENST00000614944 PLECQ15149 4684 aaKnown RBP5.58□□□□□ -1.52
VPS11-206ENST00000614944 C6orf48Q9UBA6 75 aa5.58□□□□□ -1.52
VPS11-206ENST00000614944 CAMK2N2Q96S95 79 aa5.57□□□□□ -1.52
VPS11-206ENST00000614944 CSMD3Q7Z407 3707 aa5.57□□□□□ -1.52
VPS11-206ENST00000614944 UNQ6190/PRO20217Q6UXQ8 127 aa5.56□□□□□ -1.52
VPS11-206ENST00000614944 IGLV5-37A0A075B6J1 123 aa5.55□□□□□ -1.52
VPS11-206ENST00000614944 FBN3Q75N90 2809 aa5.55□□□□□ -1.52
VPS11-206ENST00000614944 NOTCH2NLQ7Z3S9 236 aa5.55□□□□□ -1.52
VPS11-206ENST00000614944 H0Y9P7 68 aa5.55□□□□□ -1.52
VPS11-206ENST00000614944 H3BPC8 53 aa5.54□□□□□ -1.52
VPS11-206ENST00000614944 STAB2Q8WWQ8 2551 aa5.54□□□□□ -1.52
VPS11-206ENST00000614944 MIR22HGQ0VDD5 57 aa5.52□□□□□ -1.53
VPS11-206ENST00000614944 A0A087WTM6 91 aa5.5□□□□□ -1.53
VPS11-206ENST00000614944 C9orf163Q8N9P6 203 aa5.5□□□□□ -1.53
VPS11-206ENST00000614944 IGLV7-46A0A075B6I9 117 aa5.49□□□□□ -1.53
VPS11-206ENST00000614944 IGLV6-57P01721 117 aa5.49□□□□□ -1.53
VPS11-206ENST00000614944 REG3GQ6UW15 175 aa5.49□□□□□ -1.53
VPS11-206ENST00000614944 A0A1B0GW54 56 aa5.49□□□□□ -1.53
VPS11-206ENST00000614944 LY6G6CO95867 125 aa5.49□□□□□ -1.53
VPS11-206ENST00000614944 DNAH2Q9P225 4427 aa5.48□□□□□ -1.53
VPS11-206ENST00000614944 K7EQZ3 153 aa5.48□□□□□ -1.53
VPS11-206ENST00000614944 LYSTQ99698 3801 aa5.48□□□□□ -1.53
VPS11-206ENST00000614944 KRTAP16-1A8MUX0 517 aa5.47□□□□□ -1.53
VPS11-206ENST00000614944 DSCR10P59022 87 aa5.47□□□□□ -1.53
VPS11-206ENST00000614944 DNAH17Q9UFH2 4485 aa5.46□□□□□ -1.53
VPS11-206ENST00000614944 Q8NDZ9 215 aa5.45□□□□□ -1.54
VPS11-206ENST00000614944 DNAH10Q8IVF4 4471 aa5.45□□□□□ -1.54
VPS11-206ENST00000614944 DEFB116Q30KQ4 102 aa5.44□□□□□ -1.54
VPS11-206ENST00000614944 FRAS1Q86XX4 4008 aa5.44□□□□□ -1.54
VPS11-206ENST00000614944 IGLV1-50A0A075B6I6 118 aa5.44□□□□□ -1.54
VPS11-206ENST00000614944 XAGE1AQ9HD64 81 aa5.44□□□□□ -1.54
VPS11-206ENST00000614944 P0C880 135 aa5.43□□□□□ -1.54
VPS11-206ENST00000614944 SPATA8Q6RVD6 105 aa5.43□□□□□ -1.54
VPS11-206ENST00000614944 WFDC13Q8IUB5 93 aa5.43□□□□□ -1.54
VPS11-206ENST00000614944 SPRR1AP35321 89 aa5.42□□□□□ -1.54
VPS11-206ENST00000614944 SPACA4Q8TDM5 124 aa5.42□□□□□ -1.54
VPS11-206ENST00000614944 A0A096LNI7 61 aa5.42□□□□□ -1.54
VPS11-206ENST00000614944 KRTAP7-1Q8IUC3 87 aa5.42□□□□□ -1.54
VPS11-206ENST00000614944 C7orf33Q8WU49 177 aa5.39□□□□□ -1.55
VPS11-206ENST00000614944 TNP2Q05952 138 aa5.39□□□□□ -1.55
VPS11-206ENST00000614944 KMT2AQ03164 3969 aa5.39□□□□□ -1.55
VPS11-206ENST00000614944 KRTAP4-16G5E9R7 235 aaPredicted RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms