RNA–Protein interactions for RNA: ENST00000613943.4

SMARCD2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5 BASIC

Gene SMARCD2, Length 2,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-212ENST00000613943 SPRR4Q96PI1 79 aa12.3□□□□□ -0.44
SMARCD2-212ENST00000613943 DEFB116Q30KQ4 102 aa12.28□□□□□ -0.44
SMARCD2-212ENST00000613943 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.28□□□□□ -0.44
SMARCD2-212ENST00000613943 HECTD4Q9Y4D8 3996 aa12.27□□□□□ -0.45
SMARCD2-212ENST00000613943 UBE2AP49459 152 aa12.27□□□□□ -0.45
SMARCD2-212ENST00000613943 TMEM258P61165 79 aa12.26□□□□□ -0.45
SMARCD2-212ENST00000613943 FRAS1Q86XX4 4008 aa12.26□□□□□ -0.45
SMARCD2-212ENST00000613943 BCE1O60756 84 aa12.25□□□□□ -0.45
SMARCD2-212ENST00000613943 DSCR10P59022 87 aa12.24□□□□□ -0.45
SMARCD2-212ENST00000613943 TGP01266 2768 aa12.24□□□□□ -0.45
SMARCD2-212ENST00000613943 K7EQZ3 153 aa12.23□□□□□ -0.45
SMARCD2-212ENST00000613943 A0A087WSZ3 146 aa12.22□□□□□ -0.45
SMARCD2-212ENST00000613943 A0A087WTM6 91 aa12.21□□□□□ -0.45
SMARCD2-212ENST00000613943 A0A1B0GW54 56 aa12.2□□□□□ -0.46
SMARCD2-212ENST00000613943 H7BZZ5 65 aa12.2□□□□□ -0.46
SMARCD2-212ENST00000613943 SPACA4Q8TDM5 124 aa12.19□□□□□ -0.46
SMARCD2-212ENST00000613943 LINC00474Q9P2X8 69 aa12.19□□□□□ -0.46
SMARCD2-212ENST00000613943 OCR1Q9BZK8 76 aa12.18□□□□□ -0.46
SMARCD2-212ENST00000613943 KLKP1Q107X0 134 aa12.17□□□□□ -0.46
SMARCD2-212ENST00000613943 FAM30AQ9NZY2 134 aa12.17□□□□□ -0.46
SMARCD2-212ENST00000613943 OXTP01178 125 aa12.17□□□□□ -0.46
SMARCD2-212ENST00000613943 J3KT08 172 aa12.16□□□□□ -0.46
SMARCD2-212ENST00000613943 IGLV8-61A0A075B6I0 122 aa12.16□□□□□ -0.46
SMARCD2-212ENST00000613943 H0Y9J4 135 aa12.15□□□□□ -0.46
SMARCD2-212ENST00000613943 FBN3Q75N90 2809 aa12.14□□□□□ -0.47
SMARCD2-212ENST00000613943 RTL8CO15255 209 aa12.14□□□□□ -0.47
SMARCD2-212ENST00000613943 RPL37AP61513 92 aaKnown RBP12.14□□□□□ -0.47
SMARCD2-212ENST00000613943 TMEM254Q8TBM7 123 aa12.14□□□□□ -0.47
SMARCD2-212ENST00000613943 KRTAP13-1Q8IUC0 172 aa12.13□□□□□ -0.47
SMARCD2-212ENST00000613943 DNAH8Q96JB1 4490 aa12.11□□□□□ -0.47
SMARCD2-212ENST00000613943 FAM236DA0A1B0GTK5 79 aa12.1□□□□□ -0.47
SMARCD2-212ENST00000613943 FAM236CP0DP71 79 aa12.1□□□□□ -0.47
SMARCD2-212ENST00000613943 SPRR1BP22528 89 aa12.1□□□□□ -0.47
SMARCD2-212ENST00000613943 Q6ZR54 194 aa12.1□□□□□ -0.47
SMARCD2-212ENST00000613943 DNAH17Q9UFH2 4485 aa12.1□□□□□ -0.47
SMARCD2-212ENST00000613943 PKIGQ9Y2B9 76 aa12.09□□□□□ -0.47
SMARCD2-212ENST00000613943 DNAH6Q9C0G6 4158 aa12.08□□□□□ -0.48
SMARCD2-212ENST00000613943 IGLV9-49A0A0B4J1Y8 123 aa12.08□□□□□ -0.48
SMARCD2-212ENST00000613943 LY6G6CO95867 125 aa12.05□□□□□ -0.48
SMARCD2-212ENST00000613943 RPS28P62857 69 aaKnown RBP12.05□□□□□ -0.48
SMARCD2-212ENST00000613943 WFDC13Q8IUB5 93 aa12.05□□□□□ -0.48
SMARCD2-212ENST00000613943 HCG22E2RYF7 251 aa12.04□□□□□ -0.48
SMARCD2-212ENST00000613943 ANAPC11Q9NYG5 84 aa12.04□□□□□ -0.48
SMARCD2-212ENST00000613943 PSORS1C2Q9UIG4 136 aa12.04□□□□□ -0.48
SMARCD2-212ENST00000613943 A0A0U1RQV1 116 aa12.02□□□□□ -0.49
SMARCD2-212ENST00000613943 IGLV5-52A0A0A0MRZ9 124 aa12.02□□□□□ -0.49
SMARCD2-212ENST00000613943 HRCT1Q6UXD1 115 aa12□□□□□ -0.49
SMARCD2-212ENST00000613943 C1orf134Q5TEV5 83 aa12□□□□□ -0.49
SMARCD2-212ENST00000613943 LINC00472Q9H8W2 130 aa11.96□□□□□ -0.49
SMARCD2-212ENST00000613943 DNAH5Q8TE73 4624 aa11.95□□□□□ -0.5
SMARCD2-212ENST00000613943 PLAC8Q9NZF1 115 aa11.95□□□□□ -0.5
SMARCD2-212ENST00000613943 DNAH11Q96DT5 4516 aa11.95□□□□□ -0.5
SMARCD2-212ENST00000613943 NDUFC1O43677 76 aa11.94□□□□□ -0.5
SMARCD2-212ENST00000613943 HYDINQ4G0P3 5121 aa11.94□□□□□ -0.5
SMARCD2-212ENST00000613943 MOBPQ13875 183 aa11.91□□□□□ -0.5
SMARCD2-212ENST00000613943 ALMS1Q8TCU4 4167 aa11.9□□□□□ -0.5
SMARCD2-212ENST00000613943 PRR15Q8IV56 129 aa11.9□□□□□ -0.5
SMARCD2-212ENST00000613943 LCE6AA0A183 80 aa11.89□□□□□ -0.51
SMARCD2-212ENST00000613943 KRTAP10-2P60368 255 aa11.89□□□□□ -0.51
SMARCD2-212ENST00000613943 LINC00483Q53H64 154 aa11.89□□□□□ -0.51
SMARCD2-212ENST00000613943 WWC2-AS2Q96NR7 200 aa11.89□□□□□ -0.51
SMARCD2-212ENST00000613943 SERP1Q9Y6X1 66 aa11.89□□□□□ -0.51
SMARCD2-212ENST00000613943 A8MWP4 228 aa11.88□□□□□ -0.51
SMARCD2-212ENST00000613943 ZNF861PO60384 105 aa11.88□□□□□ -0.51
SMARCD2-212ENST00000613943 KRTAP29-1A8MX34 341 aaPredicted RBP11.87□□□□□ -0.51
SMARCD2-212ENST00000613943 CASC2Q6XLA1 102 aa11.86□□□□□ -0.51
SMARCD2-212ENST00000613943 C4orf26Q17RF5 130 aa11.85□□□□□ -0.51
SMARCD2-212ENST00000613943 Q5XG85 94 aa11.85□□□□□ -0.51
SMARCD2-212ENST00000613943 Q96NJ1 140 aa11.85□□□□□ -0.51
SMARCD2-212ENST00000613943 ZCCHC13Q8WW36 166 aaKnown RBP11.82□□□□□ -0.52
SMARCD2-212ENST00000613943 ZNF706Q9Y5V0 76 aaPredicted RBP11.82□□□□□ -0.52
SMARCD2-212ENST00000613943 C5orf47Q569G3 176 aa11.81□□□□□ -0.52
SMARCD2-212ENST00000613943 CIRBP-AS1Q8TBR5 109 aa11.8□□□□□ -0.52
SMARCD2-212ENST00000613943 FAT2Q9NYQ8 4349 aa11.8□□□□□ -0.52
SMARCD2-212ENST00000613943 IGLV7-43P04211 117 aa11.79□□□□□ -0.52
SMARCD2-212ENST00000613943 PRR4Q16378 134 aa11.78□□□□□ -0.52
SMARCD2-212ENST00000613943 MMP24-AS1A0A0U1RRL7 71 aa11.78□□□□□ -0.52
SMARCD2-212ENST00000613943 FAM229BQ4G0N7 80 aa11.78□□□□□ -0.52
SMARCD2-212ENST00000613943 LRP1BQ9NZR2 4599 aa11.77□□□□□ -0.52
SMARCD2-212ENST00000613943 PKD1P98161 4303 aa11.76□□□□□ -0.53
SMARCD2-212ENST00000613943 ATP5EP56381 51 aaPredicted RBP11.76□□□□□ -0.53
SMARCD2-212ENST00000613943 LINC00208Q96KT6 92 aa11.76□□□□□ -0.53
SMARCD2-212ENST00000613943 FP248Q71RG6 208 aaPredicted RBP11.74□□□□□ -0.53
SMARCD2-212ENST00000613943 NDUFB1O75438 58 aa11.73□□□□□ -0.53
SMARCD2-212ENST00000613943 hDV103S1A0JD37 113 aa11.72□□□□□ -0.53
SMARCD2-212ENST00000613943 IGHV6-1A0A0B4J1U7 121 aa11.71□□□□□ -0.53
SMARCD2-212ENST00000613943 H0Y9P7 68 aa11.71□□□□□ -0.53
SMARCD2-212ENST00000613943 MP68P56378 58 aa11.71□□□□□ -0.53
SMARCD2-212ENST00000613943 KRTAP10-1P60331 282 aa11.7□□□□□ -0.54
SMARCD2-212ENST00000613943 A0A087X002 238 aa11.68□□□□□ -0.54
SMARCD2-212ENST00000613943 SPINK6Q6UWN8 80 aa11.68□□□□□ -0.54
SMARCD2-212ENST00000613943 NOTCH2NLQ7Z3S9 236 aa11.68□□□□□ -0.54
SMARCD2-212ENST00000613943 SMIM26A0A096LP01 95 aa11.66□□□□□ -0.54
SMARCD2-212ENST00000613943 TRAV22A0A0B4J277 110 aa11.66□□□□□ -0.54
SMARCD2-212ENST00000613943 C8orf17Q9NRJ1 99 aa11.65□□□□□ -0.54
SMARCD2-212ENST00000613943 VPS13BQ7Z7G8 4022 aa11.64□□□□□ -0.55
SMARCD2-212ENST00000613943 A0A1B0GVX0 72 aa11.63□□□□□ -0.55
SMARCD2-212ENST00000613943 C1orf64Q8NEQ6 169 aa11.63□□□□□ -0.55
SMARCD2-212ENST00000613943 MPLKIPQ8TAP9 179 aa11.63□□□□□ -0.55
SMARCD2-212ENST00000613943 PKHD1P08F94 4074 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms