RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 APLNQ9ULZ1 77 aa7.11□□□□□ -1.27
FAM3A-221ENST00000612856 ANAPC11Q9NYG5 84 aa7.1□□□□□ -1.27
FAM3A-221ENST00000612856 TRAV22A0A0B4J277 110 aa7.1□□□□□ -1.27
FAM3A-221ENST00000612856 Q8NDZ9 215 aa7.1□□□□□ -1.27
FAM3A-221ENST00000612856 H3BQ85 93 aa7.09□□□□□ -1.27
FAM3A-221ENST00000612856 RETNLBQ9BQ08 111 aa7.08□□□□□ -1.28
FAM3A-221ENST00000612856 SERTAD4-AS1Q5TG53 156 aa7.08□□□□□ -1.28
FAM3A-221ENST00000612856 A0A087WTM6 91 aa7.07□□□□□ -1.28
FAM3A-221ENST00000612856 IGKV4-1P06312 121 aa7.07□□□□□ -1.28
FAM3A-221ENST00000612856 EPM2AB3EWF7 344 aa7.07□□□□□ -1.28
FAM3A-221ENST00000612856 ST20-AS1Q8NBB2 130 aa7.07□□□□□ -1.28
FAM3A-221ENST00000612856 Q9BRP9 147 aa7.06□□□□□ -1.28
FAM3A-221ENST00000612856 A0A0G2JQZ4 141 aa7.06□□□□□ -1.28
FAM3A-221ENST00000612856 A0A1W2PNN7 141 aa7.06□□□□□ -1.28
FAM3A-221ENST00000612856 LINC00612Q8N6U2 182 aa7.06□□□□□ -1.28
FAM3A-221ENST00000612856 LINC00476Q8WZB0 136 aa7.06□□□□□ -1.28
FAM3A-221ENST00000612856 A0A087WSZ3 146 aa7.06□□□□□ -1.28
FAM3A-221ENST00000612856 C15orf56Q8N910 161 aa7.06□□□□□ -1.28
FAM3A-221ENST00000612856 DHRS4-AS1Q9P1J3 65 aa7.05□□□□□ -1.28
FAM3A-221ENST00000612856 KIAA0087Q14695 138 aa7.05□□□□□ -1.28
FAM3A-221ENST00000612856 SPACA4Q8TDM5 124 aa7.05□□□□□ -1.28
FAM3A-221ENST00000612856 hDV103S1A0JD37 113 aa7.04□□□□□ -1.28
FAM3A-221ENST00000612856 MOBPQ13875 183 aa7.03□□□□□ -1.28
FAM3A-221ENST00000612856 OCR1Q9BZK8 76 aa7.03□□□□□ -1.28
FAM3A-221ENST00000612856 HCG22E2RYF7 251 aa7.03□□□□□ -1.28
FAM3A-221ENST00000612856 CD164Q04900 197 aa7.02□□□□□ -1.28
FAM3A-221ENST00000612856 A8MU10 97 aa7.02□□□□□ -1.29
FAM3A-221ENST00000612856 FAM229AH3BQW9 127 aa7.02□□□□□ -1.29
FAM3A-221ENST00000612856 PRR34Q9NV39 138 aa7.02□□□□□ -1.29
FAM3A-221ENST00000612856 KRTAP1-5Q9BYS1 174 aa7.02□□□□□ -1.29
FAM3A-221ENST00000612856 IGLV6-57P01721 117 aa7.01□□□□□ -1.29
FAM3A-221ENST00000612856 PRR15Q8IV56 129 aa7.01□□□□□ -1.29
FAM3A-221ENST00000612856 PCOTHQ58A44 107 aa7.01□□□□□ -1.29
FAM3A-221ENST00000612856 K7EQZ3 153 aa7.01□□□□□ -1.29
FAM3A-221ENST00000612856 GVQW2A0A096LPI5 108 aaPredicted RBP7□□□□□ -1.29
FAM3A-221ENST00000612856 ERC2-IT1O76042 136 aa7□□□□□ -1.29
FAM3A-221ENST00000612856 ELOF1P60002 83 aaKnown RBP7□□□□□ -1.29
FAM3A-221ENST00000612856 ZNF706Q9Y5V0 76 aaPredicted RBP6.98□□□□□ -1.29
FAM3A-221ENST00000612856 IGHV6-1A0A0B4J1U7 121 aa6.98□□□□□ -1.29
FAM3A-221ENST00000612856 RPL37AP61513 92 aaKnown RBP6.97□□□□□ -1.29
FAM3A-221ENST00000612856 SPAG11AQ6PDA7 123 aa6.97□□□□□ -1.29
FAM3A-221ENST00000612856 PLA2G1BP04054 148 aaKnown RBP6.96□□□□□ -1.29
FAM3A-221ENST00000612856 H0Y9P7 68 aa6.96□□□□□ -1.3
FAM3A-221ENST00000612856 C9orf163Q8N9P6 203 aa6.96□□□□□ -1.3
FAM3A-221ENST00000612856 RBM12B-AS1Q9P1G2 102 aa6.96□□□□□ -1.3
FAM3A-221ENST00000612856 COL7A1Q02388 2944 aa6.96□□□□□ -1.3
FAM3A-221ENST00000612856 VPREB1P12018 145 aa6.95□□□□□ -1.3
FAM3A-221ENST00000612856 J3QL48 77 aa6.94□□□□□ -1.3
FAM3A-221ENST00000612856 Q1T7F1 81 aa6.93□□□□□ -1.3
FAM3A-221ENST00000612856 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.93□□□□□ -1.3
FAM3A-221ENST00000612856 KTN1-AS1Q86SY8 53 aa6.93□□□□□ -1.3
FAM3A-221ENST00000612856 LIMD2Q9BT23 127 aa6.92□□□□□ -1.3
FAM3A-221ENST00000612856 LINC00528Q8N1L1 170 aa6.92□□□□□ -1.3
FAM3A-221ENST00000612856 Q8N377 158 aa6.91□□□□□ -1.3
FAM3A-221ENST00000612856 TYMSOSQ8TAI1 123 aa6.91□□□□□ -1.3
FAM3A-221ENST00000612856 CASC2Q6XLA1 102 aa6.91□□□□□ -1.3
FAM3A-221ENST00000612856 PSORS1C2Q9UIG4 136 aa6.9□□□□□ -1.3
FAM3A-221ENST00000612856 A0A1W2PNM2 257 aa6.9□□□□□ -1.3
FAM3A-221ENST00000612856 Q6ZRX8 168 aa6.89□□□□□ -1.31
FAM3A-221ENST00000612856 Q8NBF4 154 aa6.89□□□□□ -1.31
FAM3A-221ENST00000612856 Q5VV11 94 aa6.87□□□□□ -1.31
FAM3A-221ENST00000612856 KRTAP10-2P60368 255 aa6.86□□□□□ -1.31
FAM3A-221ENST00000612856 FBN3Q75N90 2809 aa6.86□□□□□ -1.31
FAM3A-221ENST00000612856 CSMD3Q7Z407 3707 aa6.86□□□□□ -1.31
FAM3A-221ENST00000612856 DSCR10P59022 87 aa6.84□□□□□ -1.31
FAM3A-221ENST00000612856 IGLV1-50A0A075B6I6 118 aa6.84□□□□□ -1.31
FAM3A-221ENST00000612856 COA5Q86WW8 74 aa6.84□□□□□ -1.31
FAM3A-221ENST00000612856 ATP11AUNQ6ZP68 121 aa6.84□□□□□ -1.32
FAM3A-221ENST00000612856 Q8N9P0 234 aaPredicted RBP6.82□□□□□ -1.32
FAM3A-221ENST00000612856 ANK2Q01484 3957 aa6.81□□□□□ -1.32
FAM3A-221ENST00000612856 PRAC1Q96KF2 57 aa6.8□□□□□ -1.32
FAM3A-221ENST00000612856 LOC101927531A0A1B0GV80 90 aa6.79□□□□□ -1.32
FAM3A-221ENST00000612856 ZNF861PO60384 105 aa6.79□□□□□ -1.32
FAM3A-221ENST00000612856 C9orf92A6NGG3 77 aa6.79□□□□□ -1.32
FAM3A-221ENST00000612856 PANO1I0J062 215 aa6.79□□□□□ -1.32
FAM3A-221ENST00000612856 IGKV2D-30A0A075B6S6 120 aa6.78□□□□□ -1.32
FAM3A-221ENST00000612856 IGKV2-30P06310 120 aa6.78□□□□□ -1.32
FAM3A-221ENST00000612856 C7orf65Q6ZTY9 151 aa6.78□□□□□ -1.32
FAM3A-221ENST00000612856 CYP4F30PQ9H0H9 118 aa6.77□□□□□ -1.33
FAM3A-221ENST00000612856 LCE6AA0A183 80 aa6.77□□□□□ -1.33
FAM3A-221ENST00000612856 SPINK1P00995 79 aa6.77□□□□□ -1.33
FAM3A-221ENST00000612856 LCA10Q71F78 164 aa6.77□□□□□ -1.33
FAM3A-221ENST00000612856 KRTAP10-1P60331 282 aa6.76□□□□□ -1.33
FAM3A-221ENST00000612856 PRR26Q8N8Z3 221 aa6.76□□□□□ -1.33
FAM3A-221ENST00000612856 IGLV5-48A0A075B6I7 105 aa6.76□□□□□ -1.33
FAM3A-221ENST00000612856 KCNQ1DNQ9H478 68 aa6.76□□□□□ -1.33
FAM3A-221ENST00000612856 KRTAP26-1Q6PEX3 210 aa6.76□□□□□ -1.33
FAM3A-221ENST00000612856 CNBPP62633 177 aaKnown RBP6.76□□□□□ -1.33
FAM3A-221ENST00000612856 IGLV7-43P04211 117 aa6.75□□□□□ -1.33
FAM3A-221ENST00000612856 IGFL1Q6UW32 110 aa6.75□□□□□ -1.33
FAM3A-221ENST00000612856 H3BS24 57 aa6.74□□□□□ -1.33
FAM3A-221ENST00000612856 CDC42SE1Q9NRR8 79 aa6.72□□□□□ -1.33
FAM3A-221ENST00000612856 SPINK7P58062 85 aa6.71□□□□□ -1.34
FAM3A-221ENST00000612856 ZCCHC13Q8WW36 166 aaKnown RBP6.71□□□□□ -1.34
FAM3A-221ENST00000612856 Q96NJ1 140 aa6.69□□□□□ -1.34
FAM3A-221ENST00000612856 A0A1B0GW54 56 aa6.69□□□□□ -1.34
FAM3A-221ENST00000612856 LINC00304Q8N9R0 145 aa6.69□□□□□ -1.34
FAM3A-221ENST00000612856 IGLV8-61A0A075B6I0 122 aa6.68□□□□□ -1.34
FAM3A-221ENST00000612856 TLX1NBP0CAT3 122 aa6.68□□□□□ -1.34
FAM3A-221ENST00000612856 Q75L30 129 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms