RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-223ENST00000611614 C1orf134Q5TEV5 83 aa8.85□□□□□ -0.99
COPS7B-223ENST00000611614 ETDCA0A1B0GVM5 59 aa8.84□□□□□ -0.99
COPS7B-223ENST00000611614 Q8N377 158 aa8.84□□□□□ -0.99
COPS7B-223ENST00000611614 DEFB105AQ8NG35 78 aa8.84□□□□□ -0.99
COPS7B-223ENST00000611614 LRCOL1A6NCL2 159 aa8.83□□□□□ -1
COPS7B-223ENST00000611614 FUSP35637 526 aaKnown RBP eCLIP8.83□□□□□ -1
COPS7B-223ENST00000611614 MRPL55Q7Z7F7 128 aaKnown RBP8.83□□□□□ -1
COPS7B-223ENST00000611614 Q9BRP9 147 aa8.82□□□□□ -1
COPS7B-223ENST00000611614 FP248Q71RG6 208 aaPredicted RBP8.82□□□□□ -1
COPS7B-223ENST00000611614 Q8N9L7 120 aa8.82□□□□□ -1
COPS7B-223ENST00000611614 H3BS24 57 aa8.8□□□□□ -1
COPS7B-223ENST00000611614 A0A087WTM6 91 aa8.79□□□□□ -1
COPS7B-223ENST00000611614 CD164Q04900 197 aa8.78□□□□□ -1
COPS7B-223ENST00000611614 TNP2Q05952 138 aa8.77□□□□□ -1.01
COPS7B-223ENST00000611614 C16orf90A8MZG2 172 aa8.77□□□□□ -1.01
COPS7B-223ENST00000611614 REG3GQ6UW15 175 aa8.77□□□□□ -1.01
COPS7B-223ENST00000611614 C9orf163Q8N9P6 203 aa8.77□□□□□ -1.01
COPS7B-223ENST00000611614 ST20-AS1Q8NBB2 130 aa8.77□□□□□ -1.01
COPS7B-223ENST00000611614 Q8NBF4 154 aa8.76□□□□□ -1.01
COPS7B-223ENST00000611614 VPS13DQ5THJ4 4388 aa8.76□□□□□ -1.01
COPS7B-223ENST00000611614 A0A096LNI7 61 aa8.76□□□□□ -1.01
COPS7B-223ENST00000611614 IGKV2-24A0A0C4DH68 120 aa8.76□□□□□ -1.01
COPS7B-223ENST00000611614 LCE6AA0A183 80 aa8.76□□□□□ -1.01
COPS7B-223ENST00000611614 A0A1W2PNM2 257 aa8.75□□□□□ -1.01
COPS7B-223ENST00000611614 UBE2BP63146 152 aa8.75□□□□□ -1.01
COPS7B-223ENST00000611614 C1orf137Q5JT78 98 aa8.75□□□□□ -1.01
COPS7B-223ENST00000611614 SPRR4Q96PI1 79 aa8.75□□□□□ -1.01
COPS7B-223ENST00000611614 LINC00474Q9P2X8 69 aa8.73□□□□□ -1.01
COPS7B-223ENST00000611614 SMIM29Q86T20 159 aa8.73□□□□□ -1.01
COPS7B-223ENST00000611614 HIGD2AQ9BW72 106 aa8.72□□□□□ -1.01
COPS7B-223ENST00000611614 A0A1W2PNN7 141 aa8.72□□□□□ -1.01
COPS7B-223ENST00000611614 DNAH10Q8IVF4 4471 aa8.7□□□□□ -1.02
COPS7B-223ENST00000611614 RTL8CO15255 209 aa8.7□□□□□ -1.02
COPS7B-223ENST00000611614 FAM30AQ9NZY2 134 aa8.7□□□□□ -1.02
COPS7B-223ENST00000611614 KMT2AQ03164 3969 aa8.69□□□□□ -1.02
COPS7B-223ENST00000611614 IGLV5-52A0A0A0MRZ9 124 aa8.69□□□□□ -1.02
COPS7B-223ENST00000611614 PMAIP1Q13794 54 aa8.68□□□□□ -1.02
COPS7B-223ENST00000611614 CHTF8P0CG12 524 aa8.67□□□□□ -1.02
COPS7B-223ENST00000611614 DSCR10P59022 87 aa8.67□□□□□ -1.02
COPS7B-223ENST00000611614 FAM229BQ4G0N7 80 aa8.66□□□□□ -1.02
COPS7B-223ENST00000611614 ZCCHC13Q8WW36 166 aaKnown RBP8.66□□□□□ -1.02
COPS7B-223ENST00000611614 PRLHP81277 87 aa8.65□□□□□ -1.02
COPS7B-223ENST00000611614 ALMS1Q8TCU4 4167 aa8.64□□□□□ -1.03
COPS7B-223ENST00000611614 hDV103S1A0JD37 113 aa8.63□□□□□ -1.03
COPS7B-223ENST00000611614 HCG22E2RYF7 251 aa8.63□□□□□ -1.03
COPS7B-223ENST00000611614 PHF5AQ7RTV0 110 aaKnown RBP8.63□□□□□ -1.03
COPS7B-223ENST00000611614 K7EQZ3 153 aa8.62□□□□□ -1.03
COPS7B-223ENST00000611614 MPLKIPQ8TAP9 179 aa8.62□□□□□ -1.03
COPS7B-223ENST00000611614 KRTAP11-1Q8IUC1 163 aa8.6□□□□□ -1.03
COPS7B-223ENST00000611614 SPACA4Q8TDM5 124 aa8.6□□□□□ -1.03
COPS7B-223ENST00000611614 IGLV8-61A0A075B6I0 122 aa8.6□□□□□ -1.03
COPS7B-223ENST00000611614 BRK1Q8WUW1 75 aa8.6□□□□□ -1.03
COPS7B-223ENST00000611614 CYP4F30PQ9H0H9 118 aa8.6□□□□□ -1.03
COPS7B-223ENST00000611614 H0Y9J4 135 aa8.59□□□□□ -1.03
COPS7B-223ENST00000611614 NDUFB1O75438 58 aa8.59□□□□□ -1.03
COPS7B-223ENST00000611614 PRR26Q8N8Z3 221 aa8.59□□□□□ -1.03
COPS7B-223ENST00000611614 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.59□□□□□ -1.03
COPS7B-223ENST00000611614 IGFL1Q6UW32 110 aa8.59□□□□□ -1.03
COPS7B-223ENST00000611614 DNAH6Q9C0G6 4158 aa8.58□□□□□ -1.04
COPS7B-223ENST00000611614 PANO1I0J062 215 aa8.58□□□□□ -1.04
COPS7B-223ENST00000611614 Q1T7F1 81 aa8.57□□□□□ -1.04
COPS7B-223ENST00000611614 UBE2AP49459 152 aa8.57□□□□□ -1.04
COPS7B-223ENST00000611614 C1orf64Q8NEQ6 169 aa8.56□□□□□ -1.04
COPS7B-223ENST00000611614 A0A0G2JQZ4 141 aa8.56□□□□□ -1.04
COPS7B-223ENST00000611614 KRTAP10-2P60368 255 aa8.56□□□□□ -1.04
COPS7B-223ENST00000611614 SPRR1BP22528 89 aa8.55□□□□□ -1.04
COPS7B-223ENST00000611614 DNAH2Q9P225 4427 aa8.55□□□□□ -1.04
COPS7B-223ENST00000611614 MP68P56378 58 aa8.54□□□□□ -1.04
COPS7B-223ENST00000611614 H3BPC8 53 aa8.52□□□□□ -1.05
COPS7B-223ENST00000611614 PLAC8Q9NZF1 115 aa8.52□□□□□ -1.05
COPS7B-223ENST00000611614 A0A087WSZ3 146 aa8.5□□□□□ -1.05
COPS7B-223ENST00000611614 TRAV22A0A0B4J277 110 aa8.49□□□□□ -1.05
COPS7B-223ENST00000611614 KRTAP29-1A8MX34 341 aaPredicted RBP8.48□□□□□ -1.05
COPS7B-223ENST00000611614 KRTAP13-1Q8IUC0 172 aa8.48□□□□□ -1.05
COPS7B-223ENST00000611614 DNAH17Q9UFH2 4485 aa8.48□□□□□ -1.05
COPS7B-223ENST00000611614 WFDC13Q8IUB5 93 aa8.48□□□□□ -1.05
COPS7B-223ENST00000611614 SPANXA2-OT1Q8N9U9 137 aa8.48□□□□□ -1.05
COPS7B-223ENST00000611614 HECTD4Q9Y4D8 3996 aa8.47□□□□□ -1.05
COPS7B-223ENST00000611614 KRTAP10-1P60331 282 aa8.45□□□□□ -1.06
COPS7B-223ENST00000611614 PRR15Q8IV56 129 aa8.45□□□□□ -1.06
COPS7B-223ENST00000611614 DEFB116Q30KQ4 102 aa8.45□□□□□ -1.06
COPS7B-223ENST00000611614 FRAS1Q86XX4 4008 aa8.44□□□□□ -1.06
COPS7B-223ENST00000611614 HYDINQ4G0P3 5121 aa8.44□□□□□ -1.06
COPS7B-223ENST00000611614 CASC2Q6XLA1 102 aa8.44□□□□□ -1.06
COPS7B-223ENST00000611614 CIRBP-AS1Q8TBR5 109 aa8.44□□□□□ -1.06
COPS7B-223ENST00000611614 RBM12B-AS1Q9P1G2 102 aa8.44□□□□□ -1.06
COPS7B-223ENST00000611614 A8MWP4 228 aa8.43□□□□□ -1.06
COPS7B-223ENST00000611614 LINC00208Q96KT6 92 aa8.43□□□□□ -1.06
COPS7B-223ENST00000611614 H0Y9P7 68 aa8.43□□□□□ -1.06
COPS7B-223ENST00000611614 Q6ZSA8 131 aa8.42□□□□□ -1.06
COPS7B-223ENST00000611614 PSORS1C2Q9UIG4 136 aa8.42□□□□□ -1.06
COPS7B-223ENST00000611614 LINC00472Q9H8W2 130 aa8.41□□□□□ -1.06
COPS7B-223ENST00000611614 RPL37AP61513 92 aaKnown RBP8.4□□□□□ -1.06
COPS7B-223ENST00000611614 PRR4Q16378 134 aa8.4□□□□□ -1.06
COPS7B-223ENST00000611614 SACSQ9NZJ4 4579 aa8.4□□□□□ -1.06
COPS7B-223ENST00000611614 SRRM2Q9UQ35 2752 aaKnown RBP8.38□□□□□ -1.07
COPS7B-223ENST00000611614 C8orf87E5RJ46 101 aa8.37□□□□□ -1.07
COPS7B-223ENST00000611614 LINC00483Q53H64 154 aa8.37□□□□□ -1.07
COPS7B-223ENST00000611614 PSPHP1O15172 72 aa8.36□□□□□ -1.07
COPS7B-223ENST00000611614 FAT2Q9NYQ8 4349 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms