RNA–Protein interactions for RNA: ENST00000604724.5

LINC01235-201, Transcript of long intergenic non-protein coding RNA 1235, humanhuman

TSL 2 BASIC

Gene LINC01235, Length 2,328 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01235-201ENST00000604724 IGKV3D-7A0A0C4DH55 119 aa6.78□□□□□ -1.32
LINC01235-201ENST00000604724 LINC00476Q8WZB0 136 aa6.78□□□□□ -1.32
LINC01235-201ENST00000604724 IGLV5-48A0A075B6I7 105 aa6.77□□□□□ -1.33
LINC01235-201ENST00000604724 RTL8CO15255 209 aa6.77□□□□□ -1.33
LINC01235-201ENST00000604724 C1orf134Q5TEV5 83 aa6.77□□□□□ -1.33
LINC01235-201ENST00000604724 SPACA4Q8TDM5 124 aa6.77□□□□□ -1.33
LINC01235-201ENST00000604724 ALMS1Q8TCU4 4167 aa6.77□□□□□ -1.33
LINC01235-201ENST00000604724 IMUPQ9GZP8 106 aa6.77□□□□□ -1.33
LINC01235-201ENST00000604724 LINC00474Q9P2X8 69 aa6.77□□□□□ -1.33
LINC01235-201ENST00000604724 PDE6GP18545 87 aa6.76□□□□□ -1.33
LINC01235-201ENST00000604724 BRK1Q8WUW1 75 aa6.76□□□□□ -1.33
LINC01235-201ENST00000604724 DNAH11Q96DT5 4516 aa6.76□□□□□ -1.33
LINC01235-201ENST00000604724 Q6JHZ5 121 aa6.76□□□□□ -1.33
LINC01235-201ENST00000604724 HIGD2AQ9BW72 106 aa6.76□□□□□ -1.33
LINC01235-201ENST00000604724 DNAH5Q8TE73 4624 aa6.75□□□□□ -1.33
LINC01235-201ENST00000604724 FAT2Q9NYQ8 4349 aa6.73□□□□□ -1.33
LINC01235-201ENST00000604724 H3BS24 57 aa6.73□□□□□ -1.33
LINC01235-201ENST00000604724 TNP2Q05952 138 aa6.73□□□□□ -1.33
LINC01235-201ENST00000604724 UBL5Q9BZL1 73 aa6.73□□□□□ -1.33
LINC01235-201ENST00000604724 EPM2AB3EWF7 344 aa6.73□□□□□ -1.33
LINC01235-201ENST00000604724 Q6ZVQ6 151 aa6.72□□□□□ -1.33
LINC01235-201ENST00000604724 SMIM29Q86T20 159 aa6.72□□□□□ -1.33
LINC01235-201ENST00000604724 A0A087WVE0 104 aa6.72□□□□□ -1.33
LINC01235-201ENST00000604724 IGLV5-52A0A0A0MRZ9 124 aa6.72□□□□□ -1.33
LINC01235-201ENST00000604724 PKD1P98161 4303 aa6.72□□□□□ -1.33
LINC01235-201ENST00000604724 C1orf137Q5JT78 98 aa6.7□□□□□ -1.34
LINC01235-201ENST00000604724 KRTAP3-3Q9BYR6 98 aa6.7□□□□□ -1.34
LINC01235-201ENST00000604724 KRTAP3-2Q9BYR7 98 aa6.7□□□□□ -1.34
LINC01235-201ENST00000604724 CYSTM1Q9H1C7 97 aa6.7□□□□□ -1.34
LINC01235-201ENST00000604724 H0Y9J4 135 aa6.69□□□□□ -1.34
LINC01235-201ENST00000604724 C3orf84H3BNL1 204 aa6.69□□□□□ -1.34
LINC01235-201ENST00000604724 UBE2AP49459 152 aa6.69□□□□□ -1.34
LINC01235-201ENST00000604724 A0A0G2JQZ4 141 aa6.68□□□□□ -1.34
LINC01235-201ENST00000604724 A0A1W2PNM2 257 aa6.68□□□□□ -1.34
LINC01235-201ENST00000604724 BCE1O60756 84 aa6.68□□□□□ -1.34
LINC01235-201ENST00000604724 KRTAP13-1Q8IUC0 172 aa6.68□□□□□ -1.34
LINC01235-201ENST00000604724 KRTAP10-2P60368 255 aa6.68□□□□□ -1.34
LINC01235-201ENST00000604724 HIST1H4AP62805 103 aaKnown RBP6.68□□□□□ -1.34
LINC01235-201ENST00000604724 HAMPP81172 84 aa6.68□□□□□ -1.34
LINC01235-201ENST00000604724 ATP5EP2Q5VTU8 51 aa6.68□□□□□ -1.34
LINC01235-201ENST00000604724 SACSQ9NZJ4 4579 aa6.67□□□□□ -1.34
LINC01235-201ENST00000604724 ATOX1O00244 68 aa6.67□□□□□ -1.34
LINC01235-201ENST00000604724 PLAC8Q9NZF1 115 aa6.67□□□□□ -1.34
LINC01235-201ENST00000604724 SCXQ7RTU7 201 aa6.66□□□□□ -1.34
LINC01235-201ENST00000604724 SERP1Q9Y6X1 66 aa6.66□□□□□ -1.34
LINC01235-201ENST00000604724 SMIM26A0A096LP01 95 aa6.66□□□□□ -1.34
LINC01235-201ENST00000604724 Q8NBF4 154 aa6.65□□□□□ -1.35
LINC01235-201ENST00000604724 PSORS1C2Q9UIG4 136 aa6.65□□□□□ -1.35
LINC01235-201ENST00000604724 F8WEM9 126 aa6.64□□□□□ -1.35
LINC01235-201ENST00000604724 IGFL1Q6UW32 110 aa6.64□□□□□ -1.35
LINC01235-201ENST00000604724 FAM30AQ9NZY2 134 aa6.63□□□□□ -1.35
LINC01235-201ENST00000604724 SPRR1BP22528 89 aa6.62□□□□□ -1.35
LINC01235-201ENST00000604724 CXCL6P80162 114 aa6.62□□□□□ -1.35
LINC01235-201ENST00000604724 SPRR4Q96PI1 79 aa6.62□□□□□ -1.35
LINC01235-201ENST00000604724 NREPQ16612 68 aa6.62□□□□□ -1.35
LINC01235-201ENST00000604724 IGLV8-61A0A075B6I0 122 aa6.61□□□□□ -1.35
LINC01235-201ENST00000604724 FP248Q71RG6 208 aaPredicted RBP6.61□□□□□ -1.35
LINC01235-201ENST00000604724 LRP1BQ9NZR2 4599 aa6.61□□□□□ -1.35
LINC01235-201ENST00000604724 PRR15Q8IV56 129 aa6.61□□□□□ -1.35
LINC01235-201ENST00000604724 SERP2Q8N6R1 65 aa6.6□□□□□ -1.35
LINC01235-201ENST00000604724 Q8N9L7 120 aa6.6□□□□□ -1.35
LINC01235-201ENST00000604724 PKHD1P08F94 4074 aa6.6□□□□□ -1.35
LINC01235-201ENST00000604724 LOC100996750A0A140TA64 210 aa6.6□□□□□ -1.35
LINC01235-201ENST00000604724 KRTAP4-6Q9BYQ5 205 aa6.6□□□□□ -1.35
LINC01235-201ENST00000604724 CIRBP-AS1Q8TBR5 109 aa6.59□□□□□ -1.35
LINC01235-201ENST00000604724 A0A1B0GW54 56 aa6.58□□□□□ -1.36
LINC01235-201ENST00000604724 KRTAP10-1P60331 282 aa6.58□□□□□ -1.36
LINC01235-201ENST00000604724 RBM12B-AS1Q9P1G2 102 aa6.58□□□□□ -1.36
LINC01235-201ENST00000604724 BPY2O14599 106 aa6.57□□□□□ -1.36
LINC01235-201ENST00000604724 ZNF861PO60384 105 aa6.56□□□□□ -1.36
LINC01235-201ENST00000604724 A0A087WSZ3 146 aa6.55□□□□□ -1.36
LINC01235-201ENST00000604724 IGKV4-1P06312 121 aa6.55□□□□□ -1.36
LINC01235-201ENST00000604724 Q6ZSA8 131 aa6.55□□□□□ -1.36
LINC01235-201ENST00000604724 PRR26Q8N8Z3 221 aa6.55□□□□□ -1.36
LINC01235-201ENST00000604724 IGLV9-49A0A0B4J1Y8 123 aa6.55□□□□□ -1.36
LINC01235-201ENST00000604724 LINC00483Q53H64 154 aa6.55□□□□□ -1.36
LINC01235-201ENST00000604724 ANAPC11Q9NYG5 84 aa6.55□□□□□ -1.36
LINC01235-201ENST00000604724 IGLV7-43P04211 117 aa6.53□□□□□ -1.36
LINC01235-201ENST00000604724 DEFB116Q30KQ4 102 aa6.53□□□□□ -1.36
LINC01235-201ENST00000604724 KMT2CQ8NEZ4 4911 aaKnown RBP6.52□□□□□ -1.37
LINC01235-201ENST00000604724 DSCR10P59022 87 aa6.52□□□□□ -1.37
LINC01235-201ENST00000604724 ZNF706Q9Y5V0 76 aaPredicted RBP6.51□□□□□ -1.37
LINC01235-201ENST00000604724 VPS13BQ7Z7G8 4022 aa6.51□□□□□ -1.37
LINC01235-201ENST00000604724 LCE6AA0A183 80 aa6.5□□□□□ -1.37
LINC01235-201ENST00000604724 K7EQZ3 153 aa6.49□□□□□ -1.37
LINC01235-201ENST00000604724 MOBPQ13875 183 aa6.49□□□□□ -1.37
LINC01235-201ENST00000604724 C8orf87E5RJ46 101 aa6.48□□□□□ -1.37
LINC01235-201ENST00000604724 RYR2Q92736 4967 aa6.48□□□□□ -1.37
LINC01235-201ENST00000604724 DYNC1H1Q14204 4646 aaKnown RBP6.47□□□□□ -1.37
LINC01235-201ENST00000604724 RPL37AP61513 92 aaKnown RBP6.45□□□□□ -1.38
LINC01235-201ENST00000604724 KTN1-AS1Q86SY8 53 aa6.45□□□□□ -1.38
LINC01235-201ENST00000604724 LINC00472Q9H8W2 130 aa6.45□□□□□ -1.38
LINC01235-201ENST00000604724 TRAV7A0A075B6U4 112 aa6.44□□□□□ -1.38
LINC01235-201ENST00000604724 H7BZZ5 65 aa6.42□□□□□ -1.38
LINC01235-201ENST00000604724 A0A1B0GVY2 172 aa6.41□□□□□ -1.38
LINC01235-201ENST00000604724 C20orf197Q8N268 126 aa6.41□□□□□ -1.38
LINC01235-201ENST00000604724 MPLKIPQ8TAP9 179 aa6.41□□□□□ -1.38
LINC01235-201ENST00000604724 Q96NJ1 140 aa6.41□□□□□ -1.38
LINC01235-201ENST00000604724 A0A087X002 238 aa6.41□□□□□ -1.38
LINC01235-201ENST00000604724 OCR1Q9BZK8 76 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms