RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 CLEC2BQ92478 149 aa7.89□□□□□ -1.15
SSBP4-211ENST00000601614 HSPB8Q9UJY1 196 aa7.89□□□□□ -1.15
SSBP4-211ENST00000601614 F8WEM9 126 aa7.88□□□□□ -1.15
SSBP4-211ENST00000601614 MPLKIPQ8TAP9 179 aa7.88□□□□□ -1.15
SSBP4-211ENST00000601614 HIST1H2BKO60814 126 aa7.87□□□□□ -1.15
SSBP4-211ENST00000601614 HIST1H2BJP06899 126 aa7.87□□□□□ -1.15
SSBP4-211ENST00000601614 HIST1H2BOP23527 126 aa7.87□□□□□ -1.15
SSBP4-211ENST00000601614 HIST1H2BBP33778 126 aa7.87□□□□□ -1.15
SSBP4-211ENST00000601614 HIST1H2BDP58876 126 aa7.87□□□□□ -1.15
SSBP4-211ENST00000601614 HIST1H2BCP62807 126 aa7.87□□□□□ -1.15
SSBP4-211ENST00000601614 HIST2H2BEQ16778 126 aa7.87□□□□□ -1.15
SSBP4-211ENST00000601614 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.87□□□□□ -1.15
SSBP4-211ENST00000601614 HIST1H2BHQ93079 126 aa7.87□□□□□ -1.15
SSBP4-211ENST00000601614 HIST1H2BNQ99877 126 aa7.87□□□□□ -1.15
SSBP4-211ENST00000601614 HIST1H2BMQ99879 126 aa7.87□□□□□ -1.15
SSBP4-211ENST00000601614 ZNF815PA8K554 130 aa7.86□□□□□ -1.15
SSBP4-211ENST00000601614 Q6JHZ5 121 aa7.86□□□□□ -1.15
SSBP4-211ENST00000601614 HRES1P13985 223 aa7.85□□□□□ -1.15
SSBP4-211ENST00000601614 A4D1N5 150 aa7.84□□□□□ -1.15
SSBP4-211ENST00000601614 A6NDN8 102 aa7.84□□□□□ -1.15
SSBP4-211ENST00000601614 LST1O00453 97 aa7.83□□□□□ -1.16
SSBP4-211ENST00000601614 NHP2Q9NX24 153 aaKnown RBP7.83□□□□□ -1.16
SSBP4-211ENST00000601614 SMIM11BQ8TCY0 68 aa7.82□□□□□ -1.16
SSBP4-211ENST00000601614 NEBP20929 6669 aa7.81□□□□□ -1.16
SSBP4-211ENST00000601614 SYS1-DBNDD2H3BUS1 97 aa7.8□□□□□ -1.16
SSBP4-211ENST00000601614 OCIAD2Q56VL3 154 aa7.8□□□□□ -1.16
SSBP4-211ENST00000601614 Q6ZQY7 126 aa7.79□□□□□ -1.16
SSBP4-211ENST00000601614 TRAV13-2A0A0B4J235 113 aa7.78□□□□□ -1.16
SSBP4-211ENST00000601614 DSCR10P59022 87 aa7.78□□□□□ -1.16
SSBP4-211ENST00000601614 LINC01545Q5VT33 79 aa7.78□□□□□ -1.16
SSBP4-211ENST00000601614 RBM12B-AS1Q9P1G2 102 aa7.78□□□□□ -1.16
SSBP4-211ENST00000601614 LINC00575Q6W349 94 aa7.77□□□□□ -1.17
SSBP4-211ENST00000601614 C3orf79P0CE67 100 aa7.75□□□□□ -1.17
SSBP4-211ENST00000601614 COA6Q5JTJ3 125 aaKnown RBP7.75□□□□□ -1.17
SSBP4-211ENST00000601614 NOTCH2NLQ7Z3S9 236 aa7.75□□□□□ -1.17
SSBP4-211ENST00000601614 MUSTN1Q8IVN3 82 aa7.75□□□□□ -1.17
SSBP4-211ENST00000601614 H3BUT2 72 aa7.74□□□□□ -1.17
SSBP4-211ENST00000601614 PET117Q6UWS5 81 aa7.74□□□□□ -1.17
SSBP4-211ENST00000601614 IFITM1P13164 125 aa7.73□□□□□ -1.17
SSBP4-211ENST00000601614 hADV29S1A0JD25 119 aa7.72□□□□□ -1.17
SSBP4-211ENST00000601614 SCGB1D4Q6XE38 83 aa7.72□□□□□ -1.17
SSBP4-211ENST00000601614 KRTDAPP60985 99 aa7.71□□□□□ -1.18
SSBP4-211ENST00000601614 MUC12Q9UKN1 5478 aa7.7□□□□□ -1.18
SSBP4-211ENST00000601614 KRTAP20-1Q3LI63 56 aa7.7□□□□□ -1.18
SSBP4-211ENST00000601614 Q8N9P0 234 aaPredicted RBP7.7□□□□□ -1.18
SSBP4-211ENST00000601614 COPS9Q8WXC6 57 aa7.69□□□□□ -1.18
SSBP4-211ENST00000601614 SS18L2Q9UHA2 77 aa7.69□□□□□ -1.18
SSBP4-211ENST00000601614 ANKRD39Q53RE8 183 aa7.68□□□□□ -1.18
SSBP4-211ENST00000601614 VAMP3Q15836 100 aa7.67□□□□□ -1.18
SSBP4-211ENST00000601614 ATOH7Q8N100 152 aa7.67□□□□□ -1.18
SSBP4-211ENST00000601614 Q6ZVH6 145 aa7.66□□□□□ -1.18
SSBP4-211ENST00000601614 A0A087WSZ3 146 aa7.65□□□□□ -1.18
SSBP4-211ENST00000601614 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.65□□□□□ -1.18
SSBP4-211ENST00000601614 SNHG12Q9BXW3 62 aa7.64□□□□□ -1.19
SSBP4-211ENST00000601614 LINC00313P59037 77 aa7.62□□□□□ -1.19
SSBP4-211ENST00000601614 TEN1Q86WV5 123 aa7.62□□□□□ -1.19
SSBP4-211ENST00000601614 PPDPFLQ8WWR9 84 aa7.62□□□□□ -1.19
SSBP4-211ENST00000601614 A8MWP4 228 aa7.61□□□□□ -1.19
SSBP4-211ENST00000601614 SCGB1D1O95968 90 aa7.61□□□□□ -1.19
SSBP4-211ENST00000601614 HIST3H2BBQ8N257 126 aa7.61□□□□□ -1.19
SSBP4-211ENST00000601614 SIGMAR1Q99720 223 aa7.61□□□□□ -1.19
SSBP4-211ENST00000601614 HIST1H2BLQ99880 126 aa7.59□□□□□ -1.19
SSBP4-211ENST00000601614 MTURNQ8N3F0 131 aa7.57□□□□□ -1.2
SSBP4-211ENST00000601614 S100A1P23297 94 aa7.55□□□□□ -1.2
SSBP4-211ENST00000601614 S100A2P29034 98 aa7.53□□□□□ -1.2
SSBP4-211ENST00000601614 IGKV4-1P06312 121 aa7.52□□□□□ -1.21
SSBP4-211ENST00000601614 A0A1W2PNM2 257 aa7.51□□□□□ -1.21
SSBP4-211ENST00000601614 NDUFV3P56181 108 aaKnown RBP7.51□□□□□ -1.21
SSBP4-211ENST00000601614 SPINK7P58062 85 aa7.5□□□□□ -1.21
SSBP4-211ENST00000601614 SNRPEP62304 92 aaKnown RBP7.5□□□□□ -1.21
SSBP4-211ENST00000601614 BVES-AS1Q5T3Y7 98 aa7.49□□□□□ -1.21
SSBP4-211ENST00000601614 S100A6P06703 90 aa7.48□□□□□ -1.21
SSBP4-211ENST00000601614 DEFB116Q30KQ4 102 aa7.48□□□□□ -1.21
SSBP4-211ENST00000601614 C12orf57Q99622 126 aa7.47□□□□□ -1.21
SSBP4-211ENST00000601614 IGHV6-1A0A0B4J1U7 121 aa7.45□□□□□ -1.22
SSBP4-211ENST00000601614 HSBP1L1C9JCN9 74 aa7.45□□□□□ -1.22
SSBP4-211ENST00000601614 H3BMG7 143 aa7.45□□□□□ -1.22
SSBP4-211ENST00000601614 ZCCHC13Q8WW36 166 aaKnown RBP7.44□□□□□ -1.22
SSBP4-211ENST00000601614 FAM218AQ96MZ4 157 aa7.44□□□□□ -1.22
SSBP4-211ENST00000601614 KRTAP5-9P26371 169 aa7.43□□□□□ -1.22
SSBP4-211ENST00000601614 WFDC13Q8IUB5 93 aa7.43□□□□□ -1.22
SSBP4-211ENST00000601614 LINC00472Q9H8W2 130 aa7.43□□□□□ -1.22
SSBP4-211ENST00000601614 A6NN06 94 aa7.42□□□□□ -1.22
SSBP4-211ENST00000601614 COX8AP10176 69 aa7.39□□□□□ -1.23
SSBP4-211ENST00000601614 KMT2DO14686 5537 aa7.38□□□□□ -1.23
SSBP4-211ENST00000601614 MT1BP07438 61 aa7.37□□□□□ -1.23
SSBP4-211ENST00000601614 HIST1H4GQ99525 98 aa7.36□□□□□ -1.23
SSBP4-211ENST00000601614 TRBV7-4A0A0J9YYF1 115 aa7.35□□□□□ -1.23
SSBP4-211ENST00000601614 FABP2P12104 132 aa7.35□□□□□ -1.23
SSBP4-211ENST00000601614 C14orf144Q96I85 54 aa7.35□□□□□ -1.23
SSBP4-211ENST00000601614 PAM16Q9Y3D7 125 aa7.35□□□□□ -1.23
SSBP4-211ENST00000601614 MDN1Q9NU22 5596 aa7.35□□□□□ -1.23
SSBP4-211ENST00000601614 C8orf87E5RJ46 101 aa7.34□□□□□ -1.23
SSBP4-211ENST00000601614 DLEU1O43261 78 aa7.34□□□□□ -1.23
SSBP4-211ENST00000601614 A0A1B0GVX0 72 aa7.33□□□□□ -1.24
SSBP4-211ENST00000601614 KRTAP2-3P0C7H8 128 aa7.33□□□□□ -1.24
SSBP4-211ENST00000601614 SPATA45Q537H7 98 aa7.33□□□□□ -1.24
SSBP4-211ENST00000601614 C2orf91Q6ZV80 131 aa7.33□□□□□ -1.24
SSBP4-211ENST00000601614 RAB37Q96AX2 223 aa7.33□□□□□ -1.24
SSBP4-211ENST00000601614 KRTAP2-4Q9BYR9 128 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms