RNA–Protein interactions for RNA: ENST00000600236.1

HIF3A-217, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 313 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-217ENST00000600236 ANKRD29Q8N6D5 301 aa6.62□□□□□ -1.35
HIF3A-217ENST00000600236 OR13C6PQ8NH95 151 aa6.62□□□□□ -1.35
HIF3A-217ENST00000600236 A0A1B0GX51 115 aa6.61□□□□□ -1.35
HIF3A-217ENST00000600236 NCR3O14931 201 aa6.61□□□□□ -1.35
HIF3A-217ENST00000600236 FAM218AQ96MZ4 157 aa6.61□□□□□ -1.35
HIF3A-217ENST00000600236 SPRR4Q96PI1 79 aa6.61□□□□□ -1.35
HIF3A-217ENST00000600236 ETDCA0A1B0GVM5 59 aa6.6□□□□□ -1.35
HIF3A-217ENST00000600236 C3orf22Q8N5N4 141 aa6.6□□□□□ -1.35
HIF3A-217ENST00000600236 S100A7L2Q5SY68 101 aa6.59□□□□□ -1.35
HIF3A-217ENST00000600236 PPDPFLQ8WWR9 84 aa6.59□□□□□ -1.35
HIF3A-217ENST00000600236 KCNQ1DNQ9H478 68 aa6.59□□□□□ -1.35
HIF3A-217ENST00000600236 CBY1Q9Y3M2 126 aa6.59□□□□□ -1.35
HIF3A-217ENST00000600236 J3QR89 54 aa6.58□□□□□ -1.36
HIF3A-217ENST00000600236 TRBV7-6A0A0J9YX20 115 aa6.57□□□□□ -1.36
HIF3A-217ENST00000600236 SPRR1AP35321 89 aa6.57□□□□□ -1.36
HIF3A-217ENST00000600236 FP248Q71RG6 208 aaPredicted RBP6.57□□□□□ -1.36
HIF3A-217ENST00000600236 TRBV10-3A0A0K0K1G6 114 aa6.56□□□□□ -1.36
HIF3A-217ENST00000600236 C6orf99Q4VX62 202 aa6.56□□□□□ -1.36
HIF3A-217ENST00000600236 SMCR5Q8TEV8 140 aa6.56□□□□□ -1.36
HIF3A-217ENST00000600236 TRAV23DV6A0A075B6W5 121 aa6.55□□□□□ -1.36
HIF3A-217ENST00000600236 Q8NBF4 154 aa6.55□□□□□ -1.36
HIF3A-217ENST00000600236 DNAL4O96015 105 aa6.54□□□□□ -1.36
HIF3A-217ENST00000600236 SPINK1P00995 79 aa6.54□□□□□ -1.36
HIF3A-217ENST00000600236 KRTAP4-16G5E9R7 235 aaPredicted RBP6.53□□□□□ -1.36
HIF3A-217ENST00000600236 BAALC-AS2P0C853 105 aa6.53□□□□□ -1.36
HIF3A-217ENST00000600236 LINC00483Q53H64 154 aa6.53□□□□□ -1.36
HIF3A-217ENST00000600236 GAGE2AQ6NT46 116 aa6.53□□□□□ -1.36
HIF3A-217ENST00000600236 LINC00575Q6W349 94 aa6.53□□□□□ -1.36
HIF3A-217ENST00000600236 ZNF73O43830 326 aaPredicted RBP6.52□□□□□ -1.37
HIF3A-217ENST00000600236 SNCGO76070 127 aa6.52□□□□□ -1.37
HIF3A-217ENST00000600236 MUC2Q02817 5179 aa6.52□□□□□ -1.37
HIF3A-217ENST00000600236 B5MCH6 92 aa6.51□□□□□ -1.37
HIF3A-217ENST00000600236 ELOF1P60002 83 aaKnown RBP6.51□□□□□ -1.37
HIF3A-217ENST00000600236 TEX49A0A1B0GTD5 131 aa6.5□□□□□ -1.37
HIF3A-217ENST00000600236 H3BQ85 93 aa6.5□□□□□ -1.37
HIF3A-217ENST00000600236 COX7BP24311 80 aa6.5□□□□□ -1.37
HIF3A-217ENST00000600236 RPS29P62273 56 aaKnown RBP6.5□□□□□ -1.37
HIF3A-217ENST00000600236 SSBP3-AS1Q7Z2R9 100 aa6.5□□□□□ -1.37
HIF3A-217ENST00000600236 ORMDL1Q9P0S3 153 aa6.5□□□□□ -1.37
HIF3A-217ENST00000600236 IGLV9-49A0A0B4J1Y8 123 aa6.49□□□□□ -1.37
HIF3A-217ENST00000600236 hADV29S1A0JD25 119 aa6.49□□□□□ -1.37
HIF3A-217ENST00000600236 MOBPQ13875 183 aa6.49□□□□□ -1.37
HIF3A-217ENST00000600236 Q6ZRX8 168 aa6.49□□□□□ -1.37
HIF3A-217ENST00000600236 OBSCN-AS1Q96MR7 158 aa6.49□□□□□ -1.37
HIF3A-217ENST00000600236 FAM240AA0A1B0GVK7 77 aa6.48□□□□□ -1.37
HIF3A-217ENST00000600236 VPS25Q9BRG1 176 aa6.48□□□□□ -1.37
HIF3A-217ENST00000600236 KRTAP13-3Q3SY46 172 aa6.47□□□□□ -1.37
HIF3A-217ENST00000600236 LCE2AQ5TA79 106 aaPredicted RBP6.47□□□□□ -1.37
HIF3A-217ENST00000600236 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.47□□□□□ -1.37
HIF3A-217ENST00000600236 TMEM256-PLSCR3K7ERE1 68 aa6.46□□□□□ -1.38
HIF3A-217ENST00000600236 ERC2-IT1O76042 136 aa6.46□□□□□ -1.38
HIF3A-217ENST00000600236 Q9BRP9 147 aa6.46□□□□□ -1.38
HIF3A-217ENST00000600236 MUC17Q685J3 4493 aa6.46□□□□□ -1.38
HIF3A-217ENST00000600236 GHRHP01286 108 aa6.45□□□□□ -1.38
HIF3A-217ENST00000600236 C9orf153Q5TBE3 101 aa6.45□□□□□ -1.38
HIF3A-217ENST00000600236 SEC61BP60468 96 aaKnown RBP6.44□□□□□ -1.38
HIF3A-217ENST00000600236 ASB16-AS1Q495Z4 193 aa6.44□□□□□ -1.38
HIF3A-217ENST00000600236 JMJD7-PLA2G4BH0Y9G9 81 aa6.43□□□□□ -1.38
HIF3A-217ENST00000600236 ACYP1P07311 99 aa6.43□□□□□ -1.38
HIF3A-217ENST00000600236 Q6ZQY7 126 aa6.43□□□□□ -1.38
HIF3A-217ENST00000600236 Q8N377 158 aa6.43□□□□□ -1.38
HIF3A-217ENST00000600236 KRTAP9-2Q9BYQ4 174 aa6.43□□□□□ -1.38
HIF3A-217ENST00000600236 DHRS4-AS1Q9P1J3 65 aa6.42□□□□□ -1.38
HIF3A-217ENST00000600236 FAT4Q6V0I7 4981 aa6.41□□□□□ -1.38
HIF3A-217ENST00000600236 LINC01547P58512 204 aaPredicted RBP6.39□□□□□ -1.39
HIF3A-217ENST00000600236 LIMD2Q9BT23 127 aa6.39□□□□□ -1.39
HIF3A-217ENST00000600236 LOC110117498A0A087WWA1 95 aa6.38□□□□□ -1.39
HIF3A-217ENST00000600236 C21orf62-AS1Q17RA5 79 aa6.38□□□□□ -1.39
HIF3A-217ENST00000600236 ST20-AS1Q8NBB2 130 aa6.38□□□□□ -1.39
HIF3A-217ENST00000600236 SIGMAR1Q99720 223 aa6.38□□□□□ -1.39
HIF3A-217ENST00000600236 C14orf132Q9NPU4 83 aa6.38□□□□□ -1.39
HIF3A-217ENST00000600236 LAMTOR3Q9UHA4 124 aa6.38□□□□□ -1.39
HIF3A-217ENST00000600236 IGLV5-48A0A075B6I7 105 aa6.36□□□□□ -1.39
HIF3A-217ENST00000600236 CCKP06307 115 aa6.36□□□□□ -1.39
HIF3A-217ENST00000600236 PDE6GP18545 87 aa6.36□□□□□ -1.39
HIF3A-217ENST00000600236 SPRR1BP22528 89 aa6.36□□□□□ -1.39
HIF3A-217ENST00000600236 RBM3P98179 157 aaKnown RBP6.35□□□□□ -1.39
HIF3A-217ENST00000600236 XP32Q5T750 250 aa6.35□□□□□ -1.39
HIF3A-217ENST00000600236 TRBV7-4A0A0J9YYF1 115 aa6.34□□□□□ -1.39
HIF3A-217ENST00000600236 SCGB1A1P11684 91 aa6.34□□□□□ -1.39
HIF3A-217ENST00000600236 NDUFV3P56181 108 aaKnown RBP6.34□□□□□ -1.39
HIF3A-217ENST00000600236 Q6ZQT0 140 aa6.34□□□□□ -1.39
HIF3A-217ENST00000600236 MT-ATP8P03928 68 aa6.33□□□□□ -1.4
HIF3A-217ENST00000600236 HRCT1Q6UXD1 115 aa6.32□□□□□ -1.4
HIF3A-217ENST00000600236 LINC00643Q86TS7 51 aa6.32□□□□□ -1.4
HIF3A-217ENST00000600236 DSCR8Q96T75 97 aa6.31□□□□□ -1.4
HIF3A-217ENST00000600236 CD164Q04900 197 aa6.3□□□□□ -1.4
HIF3A-217ENST00000600236 Q6Q795 121 aa6.3□□□□□ -1.4
HIF3A-217ENST00000600236 DEFB105AQ8NG35 78 aa6.3□□□□□ -1.4
HIF3A-217ENST00000600236 KRTAP4-1Q9BYQ7 146 aa6.3□□□□□ -1.4
HIF3A-217ENST00000600236 TRBV7-7A0A0K0K1E9 115 aa6.29□□□□□ -1.4
HIF3A-217ENST00000600236 A0A1B0GV72 72 aa6.29□□□□□ -1.4
HIF3A-217ENST00000600236 LINC00846Q9NV44 126 aa6.29□□□□□ -1.4
HIF3A-217ENST00000600236 KRTAP9-6A0A140TA67 174 aa6.27□□□□□ -1.41
HIF3A-217ENST00000600236 Q6JHZ5 121 aa6.27□□□□□ -1.41
HIF3A-217ENST00000600236 IMUPQ9GZP8 106 aa6.27□□□□□ -1.41
HIF3A-217ENST00000600236 IGLV8-61A0A075B6I0 122 aa6.26□□□□□ -1.41
HIF3A-217ENST00000600236 A0A1B0GW54 56 aa6.26□□□□□ -1.41
HIF3A-217ENST00000600236 C9orf92A6NGG3 77 aa6.26□□□□□ -1.41
HIF3A-217ENST00000600236 ATP5EP2Q5VTU8 51 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms