RNA–Protein interactions for RNA: ENST00000590701.5

ERCC1-211, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 345 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-211ENST00000590701 IGFL1Q6UW32 110 aa7.25□□□□□ -1.25
ERCC1-211ENST00000590701 C20orf166-AS1Q96NR2 134 aa7.25□□□□□ -1.25
ERCC1-211ENST00000590701 F8WEM9 126 aa7.24□□□□□ -1.25
ERCC1-211ENST00000590701 ZNF815PA8K554 130 aa7.23□□□□□ -1.25
ERCC1-211ENST00000590701 TRGC2P03986 189 aa7.23□□□□□ -1.25
ERCC1-211ENST00000590701 TMA7Q9Y2S6 64 aaKnown RBP7.23□□□□□ -1.25
ERCC1-211ENST00000590701 A4D1N5 150 aa7.21□□□□□ -1.26
ERCC1-211ENST00000590701 LST1O00453 97 aa7.21□□□□□ -1.26
ERCC1-211ENST00000590701 Q6JHZ5 121 aa7.2□□□□□ -1.26
ERCC1-211ENST00000590701 CLEC2BQ92478 149 aa7.2□□□□□ -1.26
ERCC1-211ENST00000590701 S100A6P06703 90 aa7.19□□□□□ -1.26
ERCC1-211ENST00000590701 OCIAD2Q56VL3 154 aa7.19□□□□□ -1.26
ERCC1-211ENST00000590701 SMIM11BQ8TCY0 68 aa7.19□□□□□ -1.26
ERCC1-211ENST00000590701 NHP2Q9NX24 153 aaKnown RBP7.19□□□□□ -1.26
ERCC1-211ENST00000590701 HRES1P13985 223 aa7.16□□□□□ -1.26
ERCC1-211ENST00000590701 MUSTN1Q8IVN3 82 aa7.16□□□□□ -1.26
ERCC1-211ENST00000590701 MPLKIPQ8TAP9 179 aa7.16□□□□□ -1.26
ERCC1-211ENST00000590701 TRAV13-2A0A0B4J235 113 aa7.15□□□□□ -1.26
ERCC1-211ENST00000590701 SYS1-DBNDD2H3BUS1 97 aa7.15□□□□□ -1.26
ERCC1-211ENST00000590701 Q6ZQY7 126 aa7.15□□□□□ -1.26
ERCC1-211ENST00000590701 DSCR10P59022 87 aa7.14□□□□□ -1.27
ERCC1-211ENST00000590701 LINC00575Q6W349 94 aa7.14□□□□□ -1.27
ERCC1-211ENST00000590701 RBM12B-AS1Q9P1G2 102 aa7.14□□□□□ -1.27
ERCC1-211ENST00000590701 NEBP20929 6669 aa7.13□□□□□ -1.27
ERCC1-211ENST00000590701 HIST1H2BKO60814 126 aa7.13□□□□□ -1.27
ERCC1-211ENST00000590701 HIST1H2BJP06899 126 aa7.13□□□□□ -1.27
ERCC1-211ENST00000590701 HIST1H2BOP23527 126 aa7.13□□□□□ -1.27
ERCC1-211ENST00000590701 HIST1H2BBP33778 126 aa7.13□□□□□ -1.27
ERCC1-211ENST00000590701 HIST1H2BDP58876 126 aa7.13□□□□□ -1.27
ERCC1-211ENST00000590701 HIST1H2BCP62807 126 aa7.13□□□□□ -1.27
ERCC1-211ENST00000590701 HIST2H2BEQ16778 126 aa7.13□□□□□ -1.27
ERCC1-211ENST00000590701 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.13□□□□□ -1.27
ERCC1-211ENST00000590701 HIST1H2BHQ93079 126 aa7.13□□□□□ -1.27
ERCC1-211ENST00000590701 HIST1H2BNQ99877 126 aa7.13□□□□□ -1.27
ERCC1-211ENST00000590701 HIST1H2BMQ99879 126 aa7.13□□□□□ -1.27
ERCC1-211ENST00000590701 H3BUT2 72 aa7.12□□□□□ -1.27
ERCC1-211ENST00000590701 SCGB1D4Q6XE38 83 aa7.12□□□□□ -1.27
ERCC1-211ENST00000590701 hADV29S1A0JD25 119 aa7.11□□□□□ -1.27
ERCC1-211ENST00000590701 IFITM1P13164 125 aa7.11□□□□□ -1.27
ERCC1-211ENST00000590701 SNRPEP62304 92 aaKnown RBP7.1□□□□□ -1.27
ERCC1-211ENST00000590701 COA6Q5JTJ3 125 aaKnown RBP7.1□□□□□ -1.27
ERCC1-211ENST00000590701 LINC01545Q5VT33 79 aa7.1□□□□□ -1.27
ERCC1-211ENST00000590701 NOTCH2NLQ7Z3S9 236 aa7.1□□□□□ -1.27
ERCC1-211ENST00000590701 VAMP3Q15836 100 aa7.09□□□□□ -1.27
ERCC1-211ENST00000590701 S100A2P29034 98 aa7.08□□□□□ -1.28
ERCC1-211ENST00000590701 COPS9Q8WXC6 57 aa7.08□□□□□ -1.28
ERCC1-211ENST00000590701 LOC105371267A0A1B0GV96 52 aa7.07□□□□□ -1.28
ERCC1-211ENST00000590701 SNHG12Q9BXW3 62 aa7.07□□□□□ -1.28
ERCC1-211ENST00000590701 ANKRD39Q53RE8 183 aa7.05□□□□□ -1.28
ERCC1-211ENST00000590701 PET117Q6UWS5 81 aa7.05□□□□□ -1.28
ERCC1-211ENST00000590701 Q6ZVH6 145 aa7.04□□□□□ -1.28
ERCC1-211ENST00000590701 HIST3H2BBQ8N257 126 aa7.04□□□□□ -1.28
ERCC1-211ENST00000590701 SS18L2Q9UHA2 77 aa7.04□□□□□ -1.28
ERCC1-211ENST00000590701 MUC12Q9UKN1 5478 aa7.03□□□□□ -1.28
ERCC1-211ENST00000590701 Q8N9P0 234 aaPredicted RBP7.03□□□□□ -1.28
ERCC1-211ENST00000590701 A0A087WSZ3 146 aa7.02□□□□□ -1.29
ERCC1-211ENST00000590701 LINC00313P59037 77 aa7.02□□□□□ -1.29
ERCC1-211ENST00000590701 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.02□□□□□ -1.29
ERCC1-211ENST00000590701 C3orf79P0CE67 100 aa7□□□□□ -1.29
ERCC1-211ENST00000590701 TEN1Q86WV5 123 aa7□□□□□ -1.29
ERCC1-211ENST00000590701 HIST1H2BLQ99880 126 aa7□□□□□ -1.29
ERCC1-211ENST00000590701 SCGB1D1O95968 90 aa6.98□□□□□ -1.29
ERCC1-211ENST00000590701 KRTAP20-1Q3LI63 56 aa6.98□□□□□ -1.29
ERCC1-211ENST00000590701 SIGMAR1Q99720 223 aa6.98□□□□□ -1.29
ERCC1-211ENST00000590701 PPDPFLQ8WWR9 84 aa6.97□□□□□ -1.29
ERCC1-211ENST00000590701 SMIM6P0DI80 62 aa6.96□□□□□ -1.3
ERCC1-211ENST00000590701 ATOH7Q8N100 152 aa6.96□□□□□ -1.3
ERCC1-211ENST00000590701 A8MWP4 228 aa6.95□□□□□ -1.3
ERCC1-211ENST00000590701 KRTDAPP60985 99 aa6.95□□□□□ -1.3
ERCC1-211ENST00000590701 MTURNQ8N3F0 131 aa6.95□□□□□ -1.3
ERCC1-211ENST00000590701 IGKV4-1P06312 121 aa6.93□□□□□ -1.3
ERCC1-211ENST00000590701 NDUFV3P56181 108 aaKnown RBP6.92□□□□□ -1.3
ERCC1-211ENST00000590701 DEFB116Q30KQ4 102 aa6.91□□□□□ -1.3
ERCC1-211ENST00000590701 A0A1W2PNM2 257 aa6.9□□□□□ -1.3
ERCC1-211ENST00000590701 C12orf57Q99622 126 aa6.9□□□□□ -1.3
ERCC1-211ENST00000590701 PYY3Q5JQD4 70 aa6.89□□□□□ -1.31
ERCC1-211ENST00000590701 BVES-AS1Q5T3Y7 98 aa6.89□□□□□ -1.31
ERCC1-211ENST00000590701 H3BMG7 143 aa6.88□□□□□ -1.31
ERCC1-211ENST00000590701 SPINK7P58062 85 aa6.88□□□□□ -1.31
ERCC1-211ENST00000590701 IGHV6-1A0A0B4J1U7 121 aa6.86□□□□□ -1.31
ERCC1-211ENST00000590701 HSBP1L1C9JCN9 74 aa6.83□□□□□ -1.32
ERCC1-211ENST00000590701 FAM218AQ96MZ4 157 aa6.83□□□□□ -1.32
ERCC1-211ENST00000590701 ZCCHC13Q8WW36 166 aaKnown RBP6.82□□□□□ -1.32
ERCC1-211ENST00000590701 VAMP8Q9BV40 100 aa6.82□□□□□ -1.32
ERCC1-211ENST00000590701 FABP2P12104 132 aa6.81□□□□□ -1.32
ERCC1-211ENST00000590701 LINC00472Q9H8W2 130 aa6.81□□□□□ -1.32
ERCC1-211ENST00000590701 TSTD3H0UI37 97 aa6.8□□□□□ -1.32
ERCC1-211ENST00000590701 WFDC13Q8IUB5 93 aa6.79□□□□□ -1.32
ERCC1-211ENST00000590701 A6NN06 94 aa6.78□□□□□ -1.32
ERCC1-211ENST00000590701 A0A1B0GV72 72 aa6.77□□□□□ -1.33
ERCC1-211ENST00000590701 SNCGO76070 127 aa6.76□□□□□ -1.33
ERCC1-211ENST00000590701 SPATA45Q537H7 98 aa6.76□□□□□ -1.33
ERCC1-211ENST00000590701 ANKRD29Q8N6D5 301 aa6.76□□□□□ -1.33
ERCC1-211ENST00000590701 PAM16Q9Y3D7 125 aa6.76□□□□□ -1.33
ERCC1-211ENST00000590701 TRBV7-4A0A0J9YYF1 115 aa6.75□□□□□ -1.33
ERCC1-211ENST00000590701 H0YGX0 51 aa6.75□□□□□ -1.33
ERCC1-211ENST00000590701 HIST1H4GQ99525 98 aa6.74□□□□□ -1.33
ERCC1-211ENST00000590701 MDN1Q9NU22 5596 aa6.74□□□□□ -1.33
ERCC1-211ENST00000590701 A0A1B0GVX0 72 aa6.73□□□□□ -1.33
ERCC1-211ENST00000590701 PCP4L1A6NKN8 68 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms