RNA–Protein interactions for RNA: ENST00000589548.5

CXXC1-211, Transcript of CXXC finger protein 1, humanhuman

TSL 3

Gene CXXC1, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-211ENST00000589548 A8MUU9 505 aa8.97□□□□□ -0.97
CXXC1-211ENST00000589548 LINC01545Q5VT33 79 aa8.97□□□□□ -0.97
CXXC1-211ENST00000589548 LINC00846Q9NV44 126 aa8.97□□□□□ -0.97
CXXC1-211ENST00000589548 KRTAP10-10P60014 251 aa8.96□□□□□ -0.98
CXXC1-211ENST00000589548 IFITM1P13164 125 aa8.93□□□□□ -0.98
CXXC1-211ENST00000589548 SCGB1D4Q6XE38 83 aa8.93□□□□□ -0.98
CXXC1-211ENST00000589548 Q6ZQY7 126 aa8.93□□□□□ -0.98
CXXC1-211ENST00000589548 LST1O00453 97 aa8.92□□□□□ -0.98
CXXC1-211ENST00000589548 OCIAD2Q56VL3 154 aa8.92□□□□□ -0.98
CXXC1-211ENST00000589548 MUSTN1Q8IVN3 82 aa8.92□□□□□ -0.98
CXXC1-211ENST00000589548 LINC00575Q6W349 94 aa8.91□□□□□ -0.98
CXXC1-211ENST00000589548 TRAV13-2A0A0B4J235 113 aa8.9□□□□□ -0.98
CXXC1-211ENST00000589548 KRTAP16-1A8MUX0 517 aa8.9□□□□□ -0.98
CXXC1-211ENST00000589548 KRTAP19-6Q3LI70 58 aa8.9□□□□□ -0.98
CXXC1-211ENST00000589548 SLC7A5P1Q8MH63 180 aa8.9□□□□□ -0.98
CXXC1-211ENST00000589548 COPS9Q8WXC6 57 aa8.9□□□□□ -0.98
CXXC1-211ENST00000589548 PET117Q6UWS5 81 aa8.89□□□□□ -0.99
CXXC1-211ENST00000589548 FAM236DA0A1B0GTK5 79 aa8.88□□□□□ -0.99
CXXC1-211ENST00000589548 FAM236CP0DP71 79 aa8.88□□□□□ -0.99
CXXC1-211ENST00000589548 KRTAP6-3Q3LI67 103 aa8.87□□□□□ -0.99
CXXC1-211ENST00000589548 Q6ZVH6 145 aa8.87□□□□□ -0.99
CXXC1-211ENST00000589548 hADV29S1A0JD25 119 aa8.86□□□□□ -0.99
CXXC1-211ENST00000589548 ANKRD39Q53RE8 183 aa8.86□□□□□ -0.99
CXXC1-211ENST00000589548 MPLKIPQ8TAP9 179 aa8.86□□□□□ -0.99
CXXC1-211ENST00000589548 COLCA2A8K830 154 aa8.85□□□□□ -0.99
CXXC1-211ENST00000589548 H3BUT2 72 aa8.85□□□□□ -0.99
CXXC1-211ENST00000589548 C3orf79P0CE67 100 aa8.84□□□□□ -0.99
CXXC1-211ENST00000589548 HRES1P13985 223 aa8.84□□□□□ -0.99
CXXC1-211ENST00000589548 VAMP3Q15836 100 aa8.83□□□□□ -1
CXXC1-211ENST00000589548 DSCR10P59022 87 aa8.82□□□□□ -1
CXXC1-211ENST00000589548 HIST1H2BKO60814 126 aa8.79□□□□□ -1
CXXC1-211ENST00000589548 HIST1H2BJP06899 126 aa8.79□□□□□ -1
CXXC1-211ENST00000589548 HIST1H2BOP23527 126 aa8.79□□□□□ -1
CXXC1-211ENST00000589548 HIST1H2BBP33778 126 aa8.79□□□□□ -1
CXXC1-211ENST00000589548 HIST1H2BDP58876 126 aa8.79□□□□□ -1
CXXC1-211ENST00000589548 HIST1H2BCP62807 126 aa8.79□□□□□ -1
CXXC1-211ENST00000589548 HIST2H2BEQ16778 126 aa8.79□□□□□ -1
CXXC1-211ENST00000589548 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.79□□□□□ -1
CXXC1-211ENST00000589548 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.79□□□□□ -1
CXXC1-211ENST00000589548 HIST1H2BHQ93079 126 aa8.79□□□□□ -1
CXXC1-211ENST00000589548 HIST1H2BNQ99877 126 aa8.79□□□□□ -1
CXXC1-211ENST00000589548 HIST1H2BMQ99879 126 aa8.79□□□□□ -1
CXXC1-211ENST00000589548 SS18L2Q9UHA2 77 aa8.79□□□□□ -1
CXXC1-211ENST00000589548 RBM12B-AS1Q9P1G2 102 aa8.77□□□□□ -1.01
CXXC1-211ENST00000589548 PPDPFLQ8WWR9 84 aa8.76□□□□□ -1.01
CXXC1-211ENST00000589548 SNHG12Q9BXW3 62 aa8.76□□□□□ -1.01
CXXC1-211ENST00000589548 KRTDAPP60985 99 aa8.75□□□□□ -1.01
CXXC1-211ENST00000589548 ATOH7Q8N100 152 aa8.75□□□□□ -1.01
CXXC1-211ENST00000589548 SCGB1D1O95968 90 aa8.74□□□□□ -1.01
CXXC1-211ENST00000589548 A0A087WSZ3 146 aa8.73□□□□□ -1.01
CXXC1-211ENST00000589548 NOTCH2NLQ7Z3S9 236 aa8.73□□□□□ -1.01
CXXC1-211ENST00000589548 TEN1Q86WV5 123 aa8.72□□□□□ -1.01
CXXC1-211ENST00000589548 NEBP20929 6669 aa8.71□□□□□ -1.01
CXXC1-211ENST00000589548 SIGMAR1Q99720 223 aa8.68□□□□□ -1.02
CXXC1-211ENST00000589548 LINC00313P59037 77 aa8.66□□□□□ -1.02
CXXC1-211ENST00000589548 BVES-AS1Q5T3Y7 98 aa8.64□□□□□ -1.03
CXXC1-211ENST00000589548 C12orf57Q99622 126 aa8.63□□□□□ -1.03
CXXC1-211ENST00000589548 NDUFV3P56181 108 aaKnown RBP8.62□□□□□ -1.03
CXXC1-211ENST00000589548 COA6Q5JTJ3 125 aaKnown RBP8.62□□□□□ -1.03
CXXC1-211ENST00000589548 A0A1W2PNM2 257 aa8.6□□□□□ -1.03
CXXC1-211ENST00000589548 IGKV4-1P06312 121 aa8.58□□□□□ -1.04
CXXC1-211ENST00000589548 Q8N9P0 234 aaPredicted RBP8.58□□□□□ -1.04
CXXC1-211ENST00000589548 FAM218AQ96MZ4 157 aa8.57□□□□□ -1.04
CXXC1-211ENST00000589548 MUC12Q9UKN1 5478 aa8.57□□□□□ -1.04
CXXC1-211ENST00000589548 MTURNQ8N3F0 131 aa8.56□□□□□ -1.04
CXXC1-211ENST00000589548 A8MWP4 228 aa8.55□□□□□ -1.04
CXXC1-211ENST00000589548 H3BMG7 143 aa8.55□□□□□ -1.04
CXXC1-211ENST00000589548 KRTAP20-1Q3LI63 56 aa8.55□□□□□ -1.04
CXXC1-211ENST00000589548 SNRPEP62304 92 aaKnown RBP8.54□□□□□ -1.04
CXXC1-211ENST00000589548 DEFB116Q30KQ4 102 aa8.52□□□□□ -1.05
CXXC1-211ENST00000589548 IGHV6-1A0A0B4J1U7 121 aa8.5□□□□□ -1.05
CXXC1-211ENST00000589548 LINC00472Q9H8W2 130 aa8.49□□□□□ -1.05
CXXC1-211ENST00000589548 SPINK7P58062 85 aa8.48□□□□□ -1.05
CXXC1-211ENST00000589548 FABP2P12104 132 aa8.46□□□□□ -1.06
CXXC1-211ENST00000589548 ZCCHC13Q8WW36 166 aaKnown RBP8.46□□□□□ -1.06
CXXC1-211ENST00000589548 HIST1H4GQ99525 98 aa8.46□□□□□ -1.06
CXXC1-211ENST00000589548 H0YGX0 51 aa8.45□□□□□ -1.06
CXXC1-211ENST00000589548 SNCGO76070 127 aa8.45□□□□□ -1.06
CXXC1-211ENST00000589548 TRBV7-4A0A0J9YYF1 115 aa8.44□□□□□ -1.06
CXXC1-211ENST00000589548 HSBP1L1C9JCN9 74 aa8.42□□□□□ -1.06
CXXC1-211ENST00000589548 A0A1B0GV72 72 aa8.41□□□□□ -1.06
CXXC1-211ENST00000589548 S100A1P23297 94 aa8.41□□□□□ -1.06
CXXC1-211ENST00000589548 WFDC13Q8IUB5 93 aa8.41□□□□□ -1.06
CXXC1-211ENST00000589548 ANKRD29Q8N6D5 301 aa8.41□□□□□ -1.06
CXXC1-211ENST00000589548 A0A1B0GVX0 72 aa8.39□□□□□ -1.07
CXXC1-211ENST00000589548 C8orf87E5RJ46 101 aa8.39□□□□□ -1.07
CXXC1-211ENST00000589548 RAB37Q96AX2 223 aa8.39□□□□□ -1.07
CXXC1-211ENST00000589548 A0A1B0GX51 115 aa8.38□□□□□ -1.07
CXXC1-211ENST00000589548 A0A0B4J2C4 111 aa8.37□□□□□ -1.07
CXXC1-211ENST00000589548 GHRHP01286 108 aa8.37□□□□□ -1.07
CXXC1-211ENST00000589548 HIST1H2BLQ99880 126 aa8.35□□□□□ -1.07
CXXC1-211ENST00000589548 CCKP06307 115 aa8.34□□□□□ -1.07
CXXC1-211ENST00000589548 TRACP01848 142 aa8.33□□□□□ -1.08
CXXC1-211ENST00000589548 COX8AP10176 69 aa8.33□□□□□ -1.08
CXXC1-211ENST00000589548 HIST3H2BBQ8N257 126 aa8.33□□□□□ -1.08
CXXC1-211ENST00000589548 TRIAP1O43715 76 aa8.28□□□□□ -1.08
CXXC1-211ENST00000589548 DLEU1O43261 78 aa8.27□□□□□ -1.09
CXXC1-211ENST00000589548 ORMDL1Q9P0S3 153 aa8.27□□□□□ -1.09
CXXC1-211ENST00000589548 A6NN06 94 aa8.25□□□□□ -1.09
CXXC1-211ENST00000589548 MDN1Q9NU22 5596 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms