RNA–Protein interactions for RNA: ENST00000588554.1

GPATCH8-206, Transcript of G-patch domain containing 8, humanhuman

TSL 2

Gene GPATCH8, Length 565 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-206ENST00000588554 HIST1H2BCP62807 126 aa4.05□□□□□ -1.76
GPATCH8-206ENST00000588554 HIST2H2BEQ16778 126 aa4.05□□□□□ -1.76
GPATCH8-206ENST00000588554 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.05□□□□□ -1.76
GPATCH8-206ENST00000588554 HIST1H2BHQ93079 126 aa4.05□□□□□ -1.76
GPATCH8-206ENST00000588554 HIST1H2BNQ99877 126 aa4.05□□□□□ -1.76
GPATCH8-206ENST00000588554 HIST1H2BMQ99879 126 aa4.05□□□□□ -1.76
GPATCH8-206ENST00000588554 SPANXDQ9BXN6 97 aa4.05□□□□□ -1.76
GPATCH8-206ENST00000588554 TIMM17BO60830 172 aa4.04□□□□□ -1.76
GPATCH8-206ENST00000588554 C1orf195Q5TG92 126 aa4.04□□□□□ -1.76
GPATCH8-206ENST00000588554 LINC01545Q5VT33 79 aa4.04□□□□□ -1.76
GPATCH8-206ENST00000588554 LIMD2Q9BT23 127 aa4.04□□□□□ -1.76
GPATCH8-206ENST00000588554 TEX49A0A1B0GTD5 131 aa4.03□□□□□ -1.76
GPATCH8-206ENST00000588554 C3orf79P0CE67 100 aa4.03□□□□□ -1.76
GPATCH8-206ENST00000588554 SLC25A34Q6PIV7 304 aa4.03□□□□□ -1.76
GPATCH8-206ENST00000588554 PRO1933Q9H354 126 aa4.03□□□□□ -1.76
GPATCH8-206ENST00000588554 A6NDN8 102 aa4.02□□□□□ -1.77
GPATCH8-206ENST00000588554 PET117Q6UWS5 81 aa4.02□□□□□ -1.77
GPATCH8-206ENST00000588554 MUSTN1Q8IVN3 82 aa4.02□□□□□ -1.77
GPATCH8-206ENST00000588554 ATOH7Q8N100 152 aa4.02□□□□□ -1.77
GPATCH8-206ENST00000588554 AKR1D1P51857 326 aa4.01□□□□□ -1.77
GPATCH8-206ENST00000588554 KRTAP10-6P60371 365 aaPredicted RBP4.01□□□□□ -1.77
GPATCH8-206ENST00000588554 KRTDAPP60985 99 aa4.01□□□□□ -1.77
GPATCH8-206ENST00000588554 CD164Q04900 197 aa4.01□□□□□ -1.77
GPATCH8-206ENST00000588554 LINC00518Q8N0U6 118 aa4.01□□□□□ -1.77
GPATCH8-206ENST00000588554 CBY1Q9Y3M2 126 aa4.01□□□□□ -1.77
GPATCH8-206ENST00000588554 SCGB1D4Q6XE38 83 aa4□□□□□ -1.77
GPATCH8-206ENST00000588554 PCP2Q8IVA1 136 aa4□□□□□ -1.77
GPATCH8-206ENST00000588554 IGLV5-48A0A075B6I7 105 aa3.99□□□□□ -1.77
GPATCH8-206ENST00000588554 TRBV7-6A0A0J9YX20 115 aa3.99□□□□□ -1.77
GPATCH8-206ENST00000588554 M0R2T5 61 aa3.99□□□□□ -1.77
GPATCH8-206ENST00000588554 RPL37P61927 97 aaKnown RBP3.99□□□□□ -1.77
GPATCH8-206ENST00000588554 A0A1B0GWB2 263 aa3.98□□□□□ -1.77
GPATCH8-206ENST00000588554 Q5XG85 94 aa3.98□□□□□ -1.77
GPATCH8-206ENST00000588554 SMIM11BQ8TCY0 68 aa3.98□□□□□ -1.77
GPATCH8-206ENST00000588554 CFC1BP0CG36 223 aa3.97□□□□□ -1.77
GPATCH8-206ENST00000588554 IFITM1P13164 125 aa3.96□□□□□ -1.78
GPATCH8-206ENST00000588554 COX6B2Q6YFQ2 88 aa3.96□□□□□ -1.78
GPATCH8-206ENST00000588554 MT3P25713 68 aa3.95□□□□□ -1.78
GPATCH8-206ENST00000588554 COA6Q5JTJ3 125 aaKnown RBP3.95□□□□□ -1.78
GPATCH8-206ENST00000588554 TRAV13-2A0A0B4J235 113 aa3.93□□□□□ -1.78
GPATCH8-206ENST00000588554 A4D1N5 150 aa3.93□□□□□ -1.78
GPATCH8-206ENST00000588554 TCL1BO95988 128 aa3.93□□□□□ -1.78
GPATCH8-206ENST00000588554 Q6Q795 121 aa3.93□□□□□ -1.78
GPATCH8-206ENST00000588554 LINC00575Q6W349 94 aa3.93□□□□□ -1.78
GPATCH8-206ENST00000588554 Q6ZQY7 126 aa3.93□□□□□ -1.78
GPATCH8-206ENST00000588554 OBSCN-AS1Q96MR7 158 aa3.93□□□□□ -1.78
GPATCH8-206ENST00000588554 C20orf202A1L168 122 aa3.92□□□□□ -1.78
GPATCH8-206ENST00000588554 IGFL1Q6UW32 110 aa3.92□□□□□ -1.78
GPATCH8-206ENST00000588554 Q6ZVH6 145 aa3.92□□□□□ -1.78
GPATCH8-206ENST00000588554 COPS9Q8WXC6 57 aa3.92□□□□□ -1.78
GPATCH8-206ENST00000588554 NHP2Q9NX24 153 aaKnown RBP3.92□□□□□ -1.78
GPATCH8-206ENST00000588554 TRBV7-7A0A0K0K1E9 115 aa3.91□□□□□ -1.78
GPATCH8-206ENST00000588554 hADV29S1A0JD25 119 aa3.91□□□□□ -1.78
GPATCH8-206ENST00000588554 F8WEM9 126 aa3.91□□□□□ -1.78
GPATCH8-206ENST00000588554 OCIAD2Q56VL3 154 aa3.91□□□□□ -1.78
GPATCH8-206ENST00000588554 C12orf57Q99622 126 aa3.91□□□□□ -1.78
GPATCH8-206ENST00000588554 H3BUT2 72 aa3.9□□□□□ -1.79
GPATCH8-206ENST00000588554 VAMP3Q15836 100 aa3.9□□□□□ -1.79
GPATCH8-206ENST00000588554 ATP11AUNQ6ZP68 121 aa3.89□□□□□ -1.79
GPATCH8-206ENST00000588554 CLEC2BQ92478 149 aa3.89□□□□□ -1.79
GPATCH8-206ENST00000588554 Q96NJ1 140 aa3.89□□□□□ -1.79
GPATCH8-206ENST00000588554 Q6JHZ5 121 aa3.88□□□□□ -1.79
GPATCH8-206ENST00000588554 HIST1H2BLQ99880 126 aa3.88□□□□□ -1.79
GPATCH8-206ENST00000588554 FLGP20930 4061 aaPredicted RBP3.87□□□□□ -1.79
GPATCH8-206ENST00000588554 HIST3H2BBQ8N257 126 aa3.87□□□□□ -1.79
GPATCH8-206ENST00000588554 SNHG12Q9BXW3 62 aa3.87□□□□□ -1.79
GPATCH8-206ENST00000588554 PCP4P48539 62 aa3.86□□□□□ -1.79
GPATCH8-206ENST00000588554 SNRPEP62304 92 aaKnown RBP3.86□□□□□ -1.79
GPATCH8-206ENST00000588554 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.86□□□□□ -1.79
GPATCH8-206ENST00000588554 Q75L30 129 aa3.86□□□□□ -1.79
GPATCH8-206ENST00000588554 LST1O00453 97 aa3.85□□□□□ -1.79
GPATCH8-206ENST00000588554 USH2AO75445 5202 aa3.85□□□□□ -1.79
GPATCH8-206ENST00000588554 SSPOA2VEC9 5147 aa3.84□□□□□ -1.79
GPATCH8-206ENST00000588554 KRTAP16-1A8MUX0 517 aa3.84□□□□□ -1.79
GPATCH8-206ENST00000588554 S100A2P29034 98 aa3.84□□□□□ -1.79
GPATCH8-206ENST00000588554 LCE1EQ5T753 118 aa3.84□□□□□ -1.79
GPATCH8-206ENST00000588554 FAM218AQ96MZ4 157 aa3.84□□□□□ -1.79
GPATCH8-206ENST00000588554 HIST1H4GQ99525 98 aa3.84□□□□□ -1.79
GPATCH8-206ENST00000588554 HSBP1L1C9JCN9 74 aa3.83□□□□□ -1.8
GPATCH8-206ENST00000588554 CFC1P0CG37 223 aa3.83□□□□□ -1.8
GPATCH8-206ENST00000588554 DSCR10P59022 87 aa3.83□□□□□ -1.8
GPATCH8-206ENST00000588554 BVES-AS1Q5T3Y7 98 aa3.83□□□□□ -1.8
GPATCH8-206ENST00000588554 A0A087WSZ3 146 aa3.82□□□□□ -1.8
GPATCH8-206ENST00000588554 A8MUU9 505 aa3.82□□□□□ -1.8
GPATCH8-206ENST00000588554 SCGB1D1O95968 90 aa3.82□□□□□ -1.8
GPATCH8-206ENST00000588554 NDUFV3P56181 108 aaKnown RBP3.82□□□□□ -1.8
GPATCH8-206ENST00000588554 C20orf166-AS1Q96NR2 134 aa3.82□□□□□ -1.8
GPATCH8-206ENST00000588554 COX8AP10176 69 aa3.81□□□□□ -1.8
GPATCH8-206ENST00000588554 PPDPFLQ8WWR9 84 aa3.81□□□□□ -1.8
GPATCH8-206ENST00000588554 C14orf144Q96I85 54 aa3.81□□□□□ -1.8
GPATCH8-206ENST00000588554 NOTCH2NLQ7Z3S9 236 aa3.8□□□□□ -1.8
GPATCH8-206ENST00000588554 TEN1Q86WV5 123 aa3.8□□□□□ -1.8
GPATCH8-206ENST00000588554 A0A1B0GV72 72 aa3.79□□□□□ -1.8
GPATCH8-206ENST00000588554 A0A1W2PNM2 257 aa3.79□□□□□ -1.8
GPATCH8-206ENST00000588554 H3BMG7 143 aa3.79□□□□□ -1.8
GPATCH8-206ENST00000588554 MT2AP02795 61 aa3.79□□□□□ -1.8
GPATCH8-206ENST00000588554 FABP2P12104 132 aa3.79□□□□□ -1.8
GPATCH8-206ENST00000588554 RAB37Q96AX2 223 aa3.79□□□□□ -1.8
GPATCH8-206ENST00000588554 S100A6P06703 90 aa3.78□□□□□ -1.8
GPATCH8-206ENST00000588554 DEFB116Q30KQ4 102 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms