RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 SCXQ7RTU7 201 aa9.47□□□□□ -0.89
CDK5RAP3-236ENST00000584991 SPRR4Q96PI1 79 aa9.47□□□□□ -0.89
CDK5RAP3-236ENST00000584991 A0A096LNI7 61 aa9.47□□□□□ -0.89
CDK5RAP3-236ENST00000584991 RPL37AP8A6NKH3 93 aa9.46□□□□□ -0.9
CDK5RAP3-236ENST00000584991 Q8NBF4 154 aa9.46□□□□□ -0.9
CDK5RAP3-236ENST00000584991 IGKV2-24A0A0C4DH68 120 aa9.45□□□□□ -0.9
CDK5RAP3-236ENST00000584991 C16orf90A8MZG2 172 aa9.45□□□□□ -0.9
CDK5RAP3-236ENST00000584991 C1orf137Q5JT78 98 aa9.45□□□□□ -0.9
CDK5RAP3-236ENST00000584991 SERP1Q9Y6X1 66 aa9.45□□□□□ -0.9
CDK5RAP3-236ENST00000584991 FAM168BA1KXE4 195 aa9.45□□□□□ -0.9
CDK5RAP3-236ENST00000584991 EPM2AB3EWF7 344 aa9.45□□□□□ -0.9
CDK5RAP3-236ENST00000584991 REG3GQ6UW15 175 aa9.45□□□□□ -0.9
CDK5RAP3-236ENST00000584991 KRTAP7-1Q8IUC3 87 aa9.45□□□□□ -0.9
CDK5RAP3-236ENST00000584991 HECTD4Q9Y4D8 3996 aa9.43□□□□□ -0.9
CDK5RAP3-236ENST00000584991 A0A1W2PNM2 257 aa9.42□□□□□ -0.9
CDK5RAP3-236ENST00000584991 CHTF8P0CG12 524 aa9.42□□□□□ -0.9
CDK5RAP3-236ENST00000584991 OCR1Q9BZK8 76 aa9.42□□□□□ -0.9
CDK5RAP3-236ENST00000584991 IGLV5-52A0A0A0MRZ9 124 aa9.42□□□□□ -0.9
CDK5RAP3-236ENST00000584991 PKIGQ9Y2B9 76 aa9.42□□□□□ -0.9
CDK5RAP3-236ENST00000584991 UBE2BP63146 152 aa9.4□□□□□ -0.9
CDK5RAP3-236ENST00000584991 TMEM254Q8TBM7 123 aa9.4□□□□□ -0.9
CDK5RAP3-236ENST00000584991 FAT2Q9NYQ8 4349 aa9.4□□□□□ -0.91
CDK5RAP3-236ENST00000584991 F8WEM9 126 aa9.38□□□□□ -0.91
CDK5RAP3-236ENST00000584991 OXTP01178 125 aa9.38□□□□□ -0.91
CDK5RAP3-236ENST00000584991 KRTAP10-2P60368 255 aa9.38□□□□□ -0.91
CDK5RAP3-236ENST00000584991 SNURFQ9Y675 71 aa9.38□□□□□ -0.91
CDK5RAP3-236ENST00000584991 DNAH11Q96DT5 4516 aa9.38□□□□□ -0.91
CDK5RAP3-236ENST00000584991 A0A1W2PNN7 141 aa9.38□□□□□ -0.91
CDK5RAP3-236ENST00000584991 ST20-AS1Q8NBB2 130 aa9.38□□□□□ -0.91
CDK5RAP3-236ENST00000584991 IGLV8-61A0A075B6I0 122 aa9.37□□□□□ -0.91
CDK5RAP3-236ENST00000584991 PANO1I0J062 215 aa9.37□□□□□ -0.91
CDK5RAP3-236ENST00000584991 C5orf47Q569G3 176 aa9.37□□□□□ -0.91
CDK5RAP3-236ENST00000584991 SMIM29Q86T20 159 aa9.36□□□□□ -0.91
CDK5RAP3-236ENST00000584991 Q8N9L7 120 aa9.36□□□□□ -0.91
CDK5RAP3-236ENST00000584991 LINC00474Q9P2X8 69 aa9.36□□□□□ -0.91
CDK5RAP3-236ENST00000584991 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.36□□□□□ -0.91
CDK5RAP3-236ENST00000584991 RYR2Q92736 4967 aa9.35□□□□□ -0.91
CDK5RAP3-236ENST00000584991 A0A0U1RQV1 116 aa9.35□□□□□ -0.91
CDK5RAP3-236ENST00000584991 KMT2CQ8NEZ4 4911 aaKnown RBP9.35□□□□□ -0.91
CDK5RAP3-236ENST00000584991 H0Y9J4 135 aa9.34□□□□□ -0.91
CDK5RAP3-236ENST00000584991 SPACA4Q8TDM5 124 aa9.34□□□□□ -0.91
CDK5RAP3-236ENST00000584991 DNAH5Q8TE73 4624 aa9.33□□□□□ -0.92
CDK5RAP3-236ENST00000584991 LINC00336Q6ZUF6 198 aa9.32□□□□□ -0.92
CDK5RAP3-236ENST00000584991 PKD1P98161 4303 aa9.32□□□□□ -0.92
CDK5RAP3-236ENST00000584991 Q5XG85 94 aa9.32□□□□□ -0.92
CDK5RAP3-236ENST00000584991 SMIM26A0A096LP01 95 aa9.31□□□□□ -0.92
CDK5RAP3-236ENST00000584991 DSCR10P59022 87 aa9.31□□□□□ -0.92
CDK5RAP3-236ENST00000584991 PHF5AQ7RTV0 110 aaKnown RBP9.3□□□□□ -0.92
CDK5RAP3-236ENST00000584991 SPRR1BP22528 89 aa9.28□□□□□ -0.92
CDK5RAP3-236ENST00000584991 IGFL1Q6UW32 110 aa9.28□□□□□ -0.92
CDK5RAP3-236ENST00000584991 KRTAP10-1P60331 282 aa9.25□□□□□ -0.93
CDK5RAP3-236ENST00000584991 FAM30AQ9NZY2 134 aa9.25□□□□□ -0.93
CDK5RAP3-236ENST00000584991 HCG22E2RYF7 251 aa9.24□□□□□ -0.93
CDK5RAP3-236ENST00000584991 KRTAP11-1Q8IUC1 163 aa9.24□□□□□ -0.93
CDK5RAP3-236ENST00000584991 PLAC8Q9NZF1 115 aa9.24□□□□□ -0.93
CDK5RAP3-236ENST00000584991 K7EQZ3 153 aa9.23□□□□□ -0.93
CDK5RAP3-236ENST00000584991 DNAH8Q96JB1 4490 aa9.23□□□□□ -0.93
CDK5RAP3-236ENST00000584991 A0A1B0GVY2 172 aa9.23□□□□□ -0.93
CDK5RAP3-236ENST00000584991 PRLHP81277 87 aa9.23□□□□□ -0.93
CDK5RAP3-236ENST00000584991 C4orf26Q17RF5 130 aa9.23□□□□□ -0.93
CDK5RAP3-236ENST00000584991 UBE2AP49459 152 aa9.22□□□□□ -0.93
CDK5RAP3-236ENST00000584991 HIGD2AQ9BW72 106 aa9.21□□□□□ -0.93
CDK5RAP3-236ENST00000584991 Q6ZSA8 131 aa9.19□□□□□ -0.94
CDK5RAP3-236ENST00000584991 ZCCHC13Q8WW36 166 aaKnown RBP9.19□□□□□ -0.94
CDK5RAP3-236ENST00000584991 CIRBP-AS1Q8TBR5 109 aa9.19□□□□□ -0.94
CDK5RAP3-236ENST00000584991 PKHD1P08F94 4074 aa9.18□□□□□ -0.94
CDK5RAP3-236ENST00000584991 A0A087WSZ3 146 aa9.17□□□□□ -0.94
CDK5RAP3-236ENST00000584991 RYR3Q15413 4870 aa9.17□□□□□ -0.94
CDK5RAP3-236ENST00000584991 NDUFB1O75438 58 aa9.17□□□□□ -0.94
CDK5RAP3-236ENST00000584991 HRCT1Q6UXD1 115 aa9.17□□□□□ -0.94
CDK5RAP3-236ENST00000584991 FP248Q71RG6 208 aaPredicted RBP9.15□□□□□ -0.94
CDK5RAP3-236ENST00000584991 H3BPC8 53 aa9.13□□□□□ -0.95
CDK5RAP3-236ENST00000584991 RPL37AP61513 92 aaKnown RBP9.13□□□□□ -0.95
CDK5RAP3-236ENST00000584991 LRP1BQ9NZR2 4599 aa9.12□□□□□ -0.95
CDK5RAP3-236ENST00000584991 PSORS1C2Q9UIG4 136 aa9.12□□□□□ -0.95
CDK5RAP3-236ENST00000584991 KRTAP29-1A8MX34 341 aaPredicted RBP9.11□□□□□ -0.95
CDK5RAP3-236ENST00000584991 MP68P56378 58 aa9.11□□□□□ -0.95
CDK5RAP3-236ENST00000584991 KRTAP13-1Q8IUC0 172 aa9.11□□□□□ -0.95
CDK5RAP3-236ENST00000584991 PRR15Q8IV56 129 aa9.11□□□□□ -0.95
CDK5RAP3-236ENST00000584991 LINC00472Q9H8W2 130 aa9.11□□□□□ -0.95
CDK5RAP3-236ENST00000584991 A8MWP4 228 aa9.11□□□□□ -0.95
CDK5RAP3-236ENST00000584991 DYNC1H1Q14204 4646 aaKnown RBP9.1□□□□□ -0.95
CDK5RAP3-236ENST00000584991 CYP4F30PQ9H0H9 118 aa9.09□□□□□ -0.95
CDK5RAP3-236ENST00000584991 A0A0G2JQZ4 141 aa9.08□□□□□ -0.96
CDK5RAP3-236ENST00000584991 hDV103S1A0JD37 113 aa9.07□□□□□ -0.96
CDK5RAP3-236ENST00000584991 CASC2Q6XLA1 102 aa9.06□□□□□ -0.96
CDK5RAP3-236ENST00000584991 DEFB116Q30KQ4 102 aa9.05□□□□□ -0.96
CDK5RAP3-236ENST00000584991 WFDC13Q8IUB5 93 aa9.05□□□□□ -0.96
CDK5RAP3-236ENST00000584991 ZNF706Q9Y5V0 76 aaPredicted RBP9.04□□□□□ -0.96
CDK5RAP3-236ENST00000584991 LINC00483Q53H64 154 aa9.03□□□□□ -0.96
CDK5RAP3-236ENST00000584991 PRO0628Q9UI54 55 aa9.03□□□□□ -0.96
CDK5RAP3-236ENST00000584991 TRAV22A0A0B4J277 110 aa9.02□□□□□ -0.96
CDK5RAP3-236ENST00000584991 SPANXA2-OT1Q8N9U9 137 aa9.02□□□□□ -0.96
CDK5RAP3-236ENST00000584991 ZNF861PO60384 105 aa9.01□□□□□ -0.97
CDK5RAP3-236ENST00000584991 IGLV7-43P04211 117 aa9.01□□□□□ -0.97
CDK5RAP3-236ENST00000584991 FAM229BQ4G0N7 80 aa9□□□□□ -0.97
CDK5RAP3-236ENST00000584991 C1orf64Q8NEQ6 169 aa9□□□□□ -0.97
CDK5RAP3-236ENST00000584991 APOBP04114 4563 aaKnown RBP9□□□□□ -0.97
CDK5RAP3-236ENST00000584991 Q1T7F1 81 aa8.98□□□□□ -0.97
CDK5RAP3-236ENST00000584991 H0Y9P7 68 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms