RNA–Protein interactions for RNA: ENST00000582933.5

PPP4R1-223, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-223ENST00000582933 LCE5AQ5TCM9 118 aa4.04□□□□□ -1.76
PPP4R1-223ENST00000582933 C1orf134Q5TEV5 83 aa4.04□□□□□ -1.76
PPP4R1-223ENST00000582933 RPL36ALQ969Q0 106 aaKnown RBP4.04□□□□□ -1.76
PPP4R1-223ENST00000582933 HYDINQ4G0P3 5121 aa4.04□□□□□ -1.76
PPP4R1-223ENST00000582933 IGHV3-38A0A0C4DH36 116 aa4.03□□□□□ -1.76
PPP4R1-223ENST00000582933 A8MU10 97 aa4.03□□□□□ -1.76
PPP4R1-223ENST00000582933 M0QY20 66 aa4.03□□□□□ -1.76
PPP4R1-223ENST00000582933 LINC01556Q5JQF7 62 aa4.03□□□□□ -1.76
PPP4R1-223ENST00000582933 SUMO4Q6EEV6 95 aa4.03□□□□□ -1.76
PPP4R1-223ENST00000582933 Q8N9P0 234 aaPredicted RBP4.03□□□□□ -1.76
PPP4R1-223ENST00000582933 SND1-IT1Q9HBX3 110 aa4.03□□□□□ -1.76
PPP4R1-223ENST00000582933 PLA2G2DQ9UNK4 145 aa4.03□□□□□ -1.76
PPP4R1-223ENST00000582933 PKHD1P08F94 4074 aa4.01□□□□□ -1.77
PPP4R1-223ENST00000582933 DNAH2Q9P225 4427 aa4.01□□□□□ -1.77
PPP4R1-223ENST00000582933 NDUFB1O75438 58 aa4.01□□□□□ -1.77
PPP4R1-223ENST00000582933 REG3AQ06141 175 aa4.01□□□□□ -1.77
PPP4R1-223ENST00000582933 Q6ZRN7 208 aaPredicted RBP4.01□□□□□ -1.77
PPP4R1-223ENST00000582933 Q8N814 137 aa4.01□□□□□ -1.77
PPP4R1-223ENST00000582933 PRR15LQ9BU68 103 aa4.01□□□□□ -1.77
PPP4R1-223ENST00000582933 ORMDL1Q9P0S3 153 aa4.01□□□□□ -1.77
PPP4R1-223ENST00000582933 FAT2Q9NYQ8 4349 aa4.01□□□□□ -1.77
PPP4R1-223ENST00000582933 DNAH10Q8IVF4 4471 aa4.01□□□□□ -1.77
PPP4R1-223ENST00000582933 A0A1B0GVY2 172 aa4□□□□□ -1.77
PPP4R1-223ENST00000582933 BPY2O14599 106 aa4□□□□□ -1.77
PPP4R1-223ENST00000582933 PDE6GP18545 87 aa4□□□□□ -1.77
PPP4R1-223ENST00000582933 LINC01547P58512 204 aaPredicted RBP4□□□□□ -1.77
PPP4R1-223ENST00000582933 ZNF625Q96I27 306 aaPredicted RBP4□□□□□ -1.77
PPP4R1-223ENST00000582933 Q9BRP9 147 aa4□□□□□ -1.77
PPP4R1-223ENST00000582933 CHCHD7Q9BUK0 85 aa4□□□□□ -1.77
PPP4R1-223ENST00000582933 EPPK1P58107 5090 aaKnown RBP3.99□□□□□ -1.77
PPP4R1-223ENST00000582933 LRCOL1A6NCL2 159 aa3.99□□□□□ -1.77
PPP4R1-223ENST00000582933 GAS8-AS1O95177 125 aa3.99□□□□□ -1.77
PPP4R1-223ENST00000582933 IGHV3-30-3P0DP02 117 aa3.99□□□□□ -1.77
PPP4R1-223ENST00000582933 FAM218AQ96MZ4 157 aa3.99□□□□□ -1.77
PPP4R1-223ENST00000582933 OCR1Q9BZK8 76 aa3.99□□□□□ -1.77
PPP4R1-223ENST00000582933 TRBV6-5A0A0K0K1A5 114 aa3.98□□□□□ -1.77
PPP4R1-223ENST00000582933 NTM-AS1Q6ZSK4 140 aa3.98□□□□□ -1.77
PPP4R1-223ENST00000582933 RPL39LQ96EH5 51 aaKnown RBP3.98□□□□□ -1.77
PPP4R1-223ENST00000582933 PRAC1Q96KF2 57 aa3.98□□□□□ -1.77
PPP4R1-223ENST00000582933 LOC110117498A0A087WWA1 95 aa3.97□□□□□ -1.77
PPP4R1-223ENST00000582933 KRTAP16-1A8MUX0 517 aa3.97□□□□□ -1.77
PPP4R1-223ENST00000582933 H3BQ85 93 aa3.97□□□□□ -1.77
PPP4R1-223ENST00000582933 TSHBP01222 138 aa3.97□□□□□ -1.77
PPP4R1-223ENST00000582933 MIR7-3HGQ8N6C7 128 aa3.97□□□□□ -1.77
PPP4R1-223ENST00000582933 LINC00167Q96N53 147 aa3.97□□□□□ -1.77
PPP4R1-223ENST00000582933 NCR3O14931 201 aa3.96□□□□□ -1.78
PPP4R1-223ENST00000582933 C20orf203Q8NBC4 194 aa3.96□□□□□ -1.78
PPP4R1-223ENST00000582933 LINC00308Q8TCZ7 52 aa3.96□□□□□ -1.78
PPP4R1-223ENST00000582933 ZCCHC13Q8WW36 166 aaKnown RBP3.96□□□□□ -1.78
PPP4R1-223ENST00000582933 KLK12Q9UKR0 248 aa3.96□□□□□ -1.78
PPP4R1-223ENST00000582933 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.96□□□□□ -1.78
PPP4R1-223ENST00000582933 PKD1P98161 4303 aa3.96□□□□□ -1.78
PPP4R1-223ENST00000582933 DNAH17Q9UFH2 4485 aa3.96□□□□□ -1.78
PPP4R1-223ENST00000582933 BIRC6Q9NR09 4857 aa3.96□□□□□ -1.78
PPP4R1-223ENST00000582933 A0A087WTM6 91 aa3.95□□□□□ -1.78
PPP4R1-223ENST00000582933 IGLV9-49A0A0B4J1Y8 123 aa3.95□□□□□ -1.78
PPP4R1-223ENST00000582933 CRPP02741 224 aa3.95□□□□□ -1.78
PPP4R1-223ENST00000582933 POLR2KP53803 58 aaKnown RBP3.95□□□□□ -1.78
PPP4R1-223ENST00000582933 HAMPP81172 84 aa3.95□□□□□ -1.78
PPP4R1-223ENST00000582933 SPANXA2-OT1Q8N9U9 137 aa3.95□□□□□ -1.78
PPP4R1-223ENST00000582933 HIGD2AQ9BW72 106 aa3.95□□□□□ -1.78
PPP4R1-223ENST00000582933 PRR34Q9NV39 138 aa3.95□□□□□ -1.78
PPP4R1-223ENST00000582933 A0A1B0GUV1 79 aa3.94□□□□□ -1.78
PPP4R1-223ENST00000582933 NDUFA1O15239 70 aa3.94□□□□□ -1.78
PPP4R1-223ENST00000582933 ANGP03950 147 aaKnown RBP3.94□□□□□ -1.78
PPP4R1-223ENST00000582933 KRTAP10-2P60368 255 aa3.94□□□□□ -1.78
PPP4R1-223ENST00000582933 ROMO1P60602 79 aa3.94□□□□□ -1.78
PPP4R1-223ENST00000582933 C9orf129Q5T035 196 aaKnown RBP3.94□□□□□ -1.78
PPP4R1-223ENST00000582933 CLPSL2Q6UWE3 100 aa3.94□□□□□ -1.78
PPP4R1-223ENST00000582933 DEFB104AQ8WTQ1 72 aa3.94□□□□□ -1.78
PPP4R1-223ENST00000582933 FAM104AQ969W3 186 aa3.94□□□□□ -1.78
PPP4R1-223ENST00000582933 LINC01558Q9Y6Z2 57 aa3.94□□□□□ -1.78
PPP4R1-223ENST00000582933 DNAH11Q96DT5 4516 aa3.93□□□□□ -1.78
PPP4R1-223ENST00000582933 IGLV4-60A0A075B6I1 120 aa3.93□□□□□ -1.78
PPP4R1-223ENST00000582933 IGKV2D-24A0A075B6R9 120 aa3.93□□□□□ -1.78
PPP4R1-223ENST00000582933 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.93□□□□□ -1.78
PPP4R1-223ENST00000582933 IGKV2-29A2NJV5 120 aaPredicted RBP3.93□□□□□ -1.78
PPP4R1-223ENST00000582933 RNASE13Q5GAN3 156 aaKnown RBP3.93□□□□□ -1.78
PPP4R1-223ENST00000582933 LINC00208Q96KT6 92 aa3.93□□□□□ -1.78
PPP4R1-223ENST00000582933 Q6ZQT0 140 aa3.92□□□□□ -1.78
PPP4R1-223ENST00000582933 LECT2O14960 151 aa3.91□□□□□ -1.78
PPP4R1-223ENST00000582933 CNBPP62633 177 aaKnown RBP3.91□□□□□ -1.78
PPP4R1-223ENST00000582933 KRTAP26-1Q6PEX3 210 aa3.91□□□□□ -1.78
PPP4R1-223ENST00000582933 PLAC8Q9NZF1 115 aa3.91□□□□□ -1.78
PPP4R1-223ENST00000582933 IGLV10-54A0A075B6I4 117 aa3.9□□□□□ -1.79
PPP4R1-223ENST00000582933 A0A087WYN8 130 aa3.9□□□□□ -1.79
PPP4R1-223ENST00000582933 IGLV5-52A0A0A0MRZ9 124 aa3.9□□□□□ -1.79
PPP4R1-223ENST00000582933 C14orf177Q52M58 125 aa3.89□□□□□ -1.79
PPP4R1-223ENST00000582933 DYNC1H1Q14204 4646 aaKnown RBP3.89□□□□□ -1.79
PPP4R1-223ENST00000582933 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.88□□□□□ -1.79
PPP4R1-223ENST00000582933 IGKV3OR2-268A0A0C4DH90 116 aa3.88□□□□□ -1.79
PPP4R1-223ENST00000582933 CHTF8P0CG12 524 aa3.88□□□□□ -1.79
PPP4R1-223ENST00000582933 RPL39P62891 51 aaKnown RBP3.88□□□□□ -1.79
PPP4R1-223ENST00000582933 Q8NDZ9 215 aa3.88□□□□□ -1.79
PPP4R1-223ENST00000582933 COX7B2Q8TF08 81 aa3.88□□□□□ -1.79
PPP4R1-223ENST00000582933 KIAA1109Q2LD37 5005 aa3.88□□□□□ -1.79
PPP4R1-223ENST00000582933 HERC2O95714 4834 aa3.87□□□□□ -1.79
PPP4R1-223ENST00000582933 LRP1BQ9NZR2 4599 aa3.87□□□□□ -1.79
PPP4R1-223ENST00000582933 IGHV3-64A0A075B6Q5 118 aa3.87□□□□□ -1.79
PPP4R1-223ENST00000582933 LINC00959A0A1B0GUT2 108 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms