RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 IGKV4-1P06312 121 aa10.32□□□□□ -0.76
USP43-204ENST00000573955 HCG22E2RYF7 251 aa10.31□□□□□ -0.76
USP43-204ENST00000573955 NKAPP1Q8N9T2 125 aa10.3□□□□□ -0.76
USP43-204ENST00000573955 A6NN06 94 aa10.29□□□□□ -0.76
USP43-204ENST00000573955 Q6ZQY7 126 aa10.28□□□□□ -0.76
USP43-204ENST00000573955 COX7BP24311 80 aa10.28□□□□□ -0.76
USP43-204ENST00000573955 C7orf65Q6ZTY9 151 aa10.27□□□□□ -0.76
USP43-204ENST00000573955 CYP4F30PQ9H0H9 118 aa10.27□□□□□ -0.76
USP43-204ENST00000573955 RPL37AP8A6NKH3 93 aa10.27□□□□□ -0.77
USP43-204ENST00000573955 PRR26Q8N8Z3 221 aa10.26□□□□□ -0.77
USP43-204ENST00000573955 C7orf33Q8WU49 177 aa10.26□□□□□ -0.77
USP43-204ENST00000573955 FAM30AQ9NZY2 134 aa10.26□□□□□ -0.77
USP43-204ENST00000573955 DYNC2H1Q8NCM8 4307 aaKnown RBP10.26□□□□□ -0.77
USP43-204ENST00000573955 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.26□□□□□ -0.77
USP43-204ENST00000573955 H3BQ85 93 aa10.26□□□□□ -0.77
USP43-204ENST00000573955 TLX1NBP0CAT3 122 aa10.25□□□□□ -0.77
USP43-204ENST00000573955 LCA10Q71F78 164 aa10.25□□□□□ -0.77
USP43-204ENST00000573955 KMT2AQ03164 3969 aa10.25□□□□□ -0.77
USP43-204ENST00000573955 ELOF1P60002 83 aaKnown RBP10.24□□□□□ -0.77
USP43-204ENST00000573955 PRR4Q16378 134 aa10.24□□□□□ -0.77
USP43-204ENST00000573955 NUPR2A6NF83 97 aa10.24□□□□□ -0.77
USP43-204ENST00000573955 LCE6AA0A183 80 aa10.22□□□□□ -0.77
USP43-204ENST00000573955 LIMD2Q9BT23 127 aa10.22□□□□□ -0.77
USP43-204ENST00000573955 IGKV2-24A0A0C4DH68 120 aa10.22□□□□□ -0.77
USP43-204ENST00000573955 KRTAP7-1Q8IUC3 87 aa10.22□□□□□ -0.77
USP43-204ENST00000573955 ZCCHC13Q8WW36 166 aaKnown RBP10.2□□□□□ -0.78
USP43-204ENST00000573955 SMIM29Q86T20 159 aa10.2□□□□□ -0.78
USP43-204ENST00000573955 PRR15LQ9BU68 103 aa10.2□□□□□ -0.78
USP43-204ENST00000573955 LINC00528Q8N1L1 170 aa10.19□□□□□ -0.78
USP43-204ENST00000573955 NBDYA0A0U1RRE5 68 aa10.18□□□□□ -0.78
USP43-204ENST00000573955 A6NED7 52 aa10.18□□□□□ -0.78
USP43-204ENST00000573955 KCNQ1DNQ9H478 68 aa10.18□□□□□ -0.78
USP43-204ENST00000573955 A0A096LNI7 61 aa10.18□□□□□ -0.78
USP43-204ENST00000573955 Q8N9P0 234 aaPredicted RBP10.17□□□□□ -0.78
USP43-204ENST00000573955 PLA2G2DQ9UNK4 145 aa10.16□□□□□ -0.78
USP43-204ENST00000573955 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.15□□□□□ -0.78
USP43-204ENST00000573955 IGLV1-50A0A075B6I6 118 aa10.15□□□□□ -0.79
USP43-204ENST00000573955 DEFB105AQ8NG35 78 aa10.14□□□□□ -0.79
USP43-204ENST00000573955 CHTF8P0CG12 524 aa10.13□□□□□ -0.79
USP43-204ENST00000573955 CNBPP62633 177 aaKnown RBP10.13□□□□□ -0.79
USP43-204ENST00000573955 Q75L30 129 aa10.13□□□□□ -0.79
USP43-204ENST00000573955 IGLV5-37A0A075B6J1 123 aa10.12□□□□□ -0.79
USP43-204ENST00000573955 NDUFB1O75438 58 aa10.12□□□□□ -0.79
USP43-204ENST00000573955 VPS13DQ5THJ4 4388 aa10.12□□□□□ -0.79
USP43-204ENST00000573955 ETDCA0A1B0GVM5 59 aa10.11□□□□□ -0.79
USP43-204ENST00000573955 CDC42SE1Q9NRR8 79 aa10.11□□□□□ -0.79
USP43-204ENST00000573955 A0A1W2PNN7 141 aa10.11□□□□□ -0.79
USP43-204ENST00000573955 Q9BRP9 147 aa10.09□□□□□ -0.79
USP43-204ENST00000573955 KRTAP21-3Q3LHN1 58 aa10.09□□□□□ -0.79
USP43-204ENST00000573955 C14orf177Q52M58 125 aa10.09□□□□□ -0.79
USP43-204ENST00000573955 Q6ZRX8 168 aa10.09□□□□□ -0.79
USP43-204ENST00000573955 Q6ZRN7 208 aaPredicted RBP10.08□□□□□ -0.8
USP43-204ENST00000573955 KRTAP4-16G5E9R7 235 aaPredicted RBP10.07□□□□□ -0.8
USP43-204ENST00000573955 LINC00208Q96KT6 92 aa10.06□□□□□ -0.8
USP43-204ENST00000573955 DNAH2Q9P225 4427 aa10.06□□□□□ -0.8
USP43-204ENST00000573955 MOBPQ13875 183 aa10.06□□□□□ -0.8
USP43-204ENST00000573955 ST20-AS1Q8NBB2 130 aa10.06□□□□□ -0.8
USP43-204ENST00000573955 C3orf84H3BNL1 204 aa10.05□□□□□ -0.8
USP43-204ENST00000573955 SPRR1AP35321 89 aa10.05□□□□□ -0.8
USP43-204ENST00000573955 REG3GQ6UW15 175 aa10.05□□□□□ -0.8
USP43-204ENST00000573955 HYDINQ4G0P3 5121 aa10.04□□□□□ -0.8
USP43-204ENST00000573955 Q8N377 158 aa10.03□□□□□ -0.8
USP43-204ENST00000573955 LOC101927531A0A1B0GV80 90 aa10.03□□□□□ -0.8
USP43-204ENST00000573955 DHRS4-AS1Q9P1J3 65 aa10.03□□□□□ -0.8
USP43-204ENST00000573955 LY6G6CO95867 125 aa10.03□□□□□ -0.8
USP43-204ENST00000573955 C9orf163Q8N9P6 203 aa10.03□□□□□ -0.8
USP43-204ENST00000573955 PRLHP81277 87 aa10.02□□□□□ -0.81
USP43-204ENST00000573955 PANO1I0J062 215 aa10.02□□□□□ -0.81
USP43-204ENST00000573955 KRTAP11-1Q8IUC1 163 aa10.01□□□□□ -0.81
USP43-204ENST00000573955 LINC01554Q52M75 96 aa9.99□□□□□ -0.81
USP43-204ENST00000573955 A0A087WTM6 91 aa9.97□□□□□ -0.81
USP43-204ENST00000573955 MP68P56378 58 aa9.96□□□□□ -0.81
USP43-204ENST00000573955 LINC00313P59037 77 aa9.96□□□□□ -0.81
USP43-204ENST00000573955 SPANXA2-OT1Q8N9U9 137 aa9.95□□□□□ -0.82
USP43-204ENST00000573955 SRRM2Q9UQ35 2752 aaKnown RBP9.95□□□□□ -0.82
USP43-204ENST00000573955 Q6ZR54 194 aa9.94□□□□□ -0.82
USP43-204ENST00000573955 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.94□□□□□ -0.82
USP43-204ENST00000573955 HECTD4Q9Y4D8 3996 aa9.93□□□□□ -0.82
USP43-204ENST00000573955 PRAC1Q96KF2 57 aa9.93□□□□□ -0.82
USP43-204ENST00000573955 WWC2-AS2Q96NR7 200 aa9.92□□□□□ -0.82
USP43-204ENST00000573955 IGLV5-48A0A075B6I7 105 aa9.91□□□□□ -0.82
USP43-204ENST00000573955 RTL8CO15255 209 aa9.9□□□□□ -0.82
USP43-204ENST00000573955 A0A0G2JQZ4 141 aa9.89□□□□□ -0.83
USP43-204ENST00000573955 C1orf134Q5TEV5 83 aa9.89□□□□□ -0.83
USP43-204ENST00000573955 CASC2Q6XLA1 102 aa9.88□□□□□ -0.83
USP43-204ENST00000573955 C1orf137Q5JT78 98 aa9.87□□□□□ -0.83
USP43-204ENST00000573955 SPACA4Q8TDM5 124 aa9.87□□□□□ -0.83
USP43-204ENST00000573955 DNAH6Q9C0G6 4158 aa9.87□□□□□ -0.83
USP43-204ENST00000573955 FRAS1Q86XX4 4008 aa9.87□□□□□ -0.83
USP43-204ENST00000573955 K7EQZ3 153 aa9.87□□□□□ -0.83
USP43-204ENST00000573955 A0A1B0GW54 56 aa9.86□□□□□ -0.83
USP43-204ENST00000573955 DSCR10P59022 87 aa9.86□□□□□ -0.83
USP43-204ENST00000573955 LINC00476Q8WZB0 136 aa9.86□□□□□ -0.83
USP43-204ENST00000573955 TNP2Q05952 138 aa9.86□□□□□ -0.83
USP43-204ENST00000573955 COA5Q86WW8 74 aa9.86□□□□□ -0.83
USP43-204ENST00000573955 A0A1W2PNM2 257 aa9.84□□□□□ -0.83
USP43-204ENST00000573955 IGLV5-52A0A0A0MRZ9 124 aa9.83□□□□□ -0.84
USP43-204ENST00000573955 LINC01558Q9Y6Z2 57 aa9.83□□□□□ -0.84
USP43-204ENST00000573955 SPINK7P58062 85 aa9.82□□□□□ -0.84
USP43-204ENST00000573955 DNAH17Q9UFH2 4485 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms