RNA–Protein interactions for RNA: ENST00000572665.1

CIITA-208, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-208ENST00000572665 ASB16-AS1Q495Z4 193 aa5.21□□□□□ -1.58
CIITA-208ENST00000572665 ARL17AQ8IVW1 177 aa5.21□□□□□ -1.58
CIITA-208ENST00000572665 ATOH7Q8N100 152 aa5.21□□□□□ -1.58
CIITA-208ENST00000572665 NDUFC2O95298 119 aa5.2□□□□□ -1.58
CIITA-208ENST00000572665 Q1RN00 199 aa5.2□□□□□ -1.58
CIITA-208ENST00000572665 Q6ZRX8 168 aa5.2□□□□□ -1.58
CIITA-208ENST00000572665 A0A0J9YXY3 114 aa5.19□□□□□ -1.58
CIITA-208ENST00000572665 KRTAP10-12P60413 245 aa5.19□□□□□ -1.58
CIITA-208ENST00000572665 SLC25A34Q6PIV7 304 aa5.19□□□□□ -1.58
CIITA-208ENST00000572665 TRAV23DV6A0A075B6W5 121 aa5.18□□□□□ -1.58
CIITA-208ENST00000572665 C9orf153Q5TBE3 101 aa5.18□□□□□ -1.58
CIITA-208ENST00000572665 TTTY13Q9BZ97 58 aa5.18□□□□□ -1.58
CIITA-208ENST00000572665 ZNF815PA8K554 130 aa5.17□□□□□ -1.58
CIITA-208ENST00000572665 TIMM17BO60830 172 aa5.17□□□□□ -1.58
CIITA-208ENST00000572665 IGLV6-57P01721 117 aa5.17□□□□□ -1.58
CIITA-208ENST00000572665 ZNF73O43830 326 aaPredicted RBP5.16□□□□□ -1.58
CIITA-208ENST00000572665 Q9BRP9 147 aa5.16□□□□□ -1.58
CIITA-208ENST00000572665 LIMD2Q9BT23 127 aa5.16□□□□□ -1.58
CIITA-208ENST00000572665 ERC2-IT1O76042 136 aa5.15□□□□□ -1.59
CIITA-208ENST00000572665 PCP2Q8IVA1 136 aa5.15□□□□□ -1.59
CIITA-208ENST00000572665 HSBP1L1C9JCN9 74 aa5.14□□□□□ -1.59
CIITA-208ENST00000572665 SOSTDC1Q6X4U4 206 aa5.14□□□□□ -1.59
CIITA-208ENST00000572665 CXCL6P80162 114 aa5.13□□□□□ -1.59
CIITA-208ENST00000572665 MUC17Q685J3 4493 aa5.12□□□□□ -1.59
CIITA-208ENST00000572665 PYY3Q5JQD4 70 aa5.12□□□□□ -1.59
CIITA-208ENST00000572665 SCGB1D4Q6XE38 83 aa5.12□□□□□ -1.59
CIITA-208ENST00000572665 OR13C6PQ8NH95 151 aa5.12□□□□□ -1.59
CIITA-208ENST00000572665 LINC00308Q8TCZ7 52 aa5.12□□□□□ -1.59
CIITA-208ENST00000572665 SPANXDQ9BXN6 97 aa5.12□□□□□ -1.59
CIITA-208ENST00000572665 SPANXCQ9NY87 97 aa5.12□□□□□ -1.59
CIITA-208ENST00000572665 LAMTOR3Q9UHA4 124 aa5.12□□□□□ -1.59
CIITA-208ENST00000572665 COX8AP10176 69 aa5.11□□□□□ -1.59
CIITA-208ENST00000572665 NPC2P61916 151 aa5.11□□□□□ -1.59
CIITA-208ENST00000572665 Q6ZVH6 145 aa5.11□□□□□ -1.59
CIITA-208ENST00000572665 FAT4Q6V0I7 4981 aa5.11□□□□□ -1.59
CIITA-208ENST00000572665 DLEU1O43261 78 aa5.1□□□□□ -1.59
CIITA-208ENST00000572665 COPS9Q8WXC6 57 aa5.1□□□□□ -1.59
CIITA-208ENST00000572665 VAMP8Q9BV40 100 aa5.1□□□□□ -1.59
CIITA-208ENST00000572665 IFITM1P13164 125 aa5.09□□□□□ -1.59
CIITA-208ENST00000572665 SPRR1BP22528 89 aa5.09□□□□□ -1.59
CIITA-208ENST00000572665 SPATA45Q537H7 98 aa5.09□□□□□ -1.59
CIITA-208ENST00000572665 CD164Q04900 197 aa5.08□□□□□ -1.6
CIITA-208ENST00000572665 ST20-AS1Q8NBB2 130 aa5.08□□□□□ -1.6
CIITA-208ENST00000572665 COX7BP24311 80 aa5.07□□□□□ -1.6
CIITA-208ENST00000572665 KRTAP10-7P60409 375 aaPredicted RBP5.07□□□□□ -1.6
CIITA-208ENST00000572665 TAL2Q16559 108 aa5.07□□□□□ -1.6
CIITA-208ENST00000572665 C14orf144Q96I85 54 aa5.07□□□□□ -1.6
CIITA-208ENST00000572665 PRO1933Q9H354 126 aa5.07□□□□□ -1.6
CIITA-208ENST00000572665 TEX49A0A1B0GTD5 131 aa5.06□□□□□ -1.6
CIITA-208ENST00000572665 ELOF1P60002 83 aaKnown RBP5.06□□□□□ -1.6
CIITA-208ENST00000572665 HRCT1Q6UXD1 115 aa5.06□□□□□ -1.6
CIITA-208ENST00000572665 MUSTN1Q8IVN3 82 aa5.06□□□□□ -1.6
CIITA-208ENST00000572665 HIGD1BQ9P298 99 aa5.06□□□□□ -1.6
CIITA-208ENST00000572665 TRBV7-6A0A0J9YX20 115 aa5.05□□□□□ -1.6
CIITA-208ENST00000572665 H7C2G1 150 aa5.05□□□□□ -1.6
CIITA-208ENST00000572665 C2orf91Q6ZV80 131 aa5.05□□□□□ -1.6
CIITA-208ENST00000572665 KRTAP4-1Q9BYQ7 146 aa5.05□□□□□ -1.6
CIITA-208ENST00000572665 IGLV8-61A0A075B6I0 122 aa5.04□□□□□ -1.6
CIITA-208ENST00000572665 C6orf99Q4VX62 202 aa5.04□□□□□ -1.6
CIITA-208ENST00000572665 A0A1B0GWB2 263 aa5.03□□□□□ -1.6
CIITA-208ENST00000572665 DEFB105AQ8NG35 78 aa5.03□□□□□ -1.6
CIITA-208ENST00000572665 NHP2Q9NX24 153 aaKnown RBP5.03□□□□□ -1.6
CIITA-208ENST00000572665 LOC105371267A0A1B0GV96 52 aa5.02□□□□□ -1.61
CIITA-208ENST00000572665 C9orf92A6NGG3 77 aa5.02□□□□□ -1.61
CIITA-208ENST00000572665 SMIM6P0DI80 62 aa5.02□□□□□ -1.61
CIITA-208ENST00000572665 PCOTHQ58A44 107 aa5.02□□□□□ -1.61
CIITA-208ENST00000572665 LCE1EQ5T753 118 aa5.02□□□□□ -1.61
CIITA-208ENST00000572665 Q5XG85 94 aa5.02□□□□□ -1.61
CIITA-208ENST00000572665 HIST1H4GQ99525 98 aa5.02□□□□□ -1.61
CIITA-208ENST00000572665 LCE3CQ5T5A8 94 aa5.01□□□□□ -1.61
CIITA-208ENST00000572665 TRAV13-2A0A0B4J235 113 aa5□□□□□ -1.61
CIITA-208ENST00000572665 A6NDN8 102 aa5□□□□□ -1.61
CIITA-208ENST00000572665 TCL1BO95988 128 aa5□□□□□ -1.61
CIITA-208ENST00000572665 F8WEM9 126 aa4.99□□□□□ -1.61
CIITA-208ENST00000572665 KRTAP10-5P60370 271 aa4.99□□□□□ -1.61
CIITA-208ENST00000572665 UQCR10Q9UDW1 63 aa4.99□□□□□ -1.61
CIITA-208ENST00000572665 IGLV5-48A0A075B6I7 105 aa4.98□□□□□ -1.61
CIITA-208ENST00000572665 VAMP3Q15836 100 aa4.98□□□□□ -1.61
CIITA-208ENST00000572665 CEND1Q8N111 149 aa4.98□□□□□ -1.61
CIITA-208ENST00000572665 SMIM11BQ8TCY0 68 aa4.97□□□□□ -1.61
CIITA-208ENST00000572665 C12orf57Q99622 126 aa4.97□□□□□ -1.61
CIITA-208ENST00000572665 A0A0B4J2C4 111 aa4.96□□□□□ -1.62
CIITA-208ENST00000572665 HSD52Q0P140 79 aa4.96□□□□□ -1.62
CIITA-208ENST00000572665 C1orf195Q5TG92 126 aa4.96□□□□□ -1.62
CIITA-208ENST00000572665 CRCT1Q9UGL9 99 aa4.96□□□□□ -1.62
CIITA-208ENST00000572665 M0R2T5 61 aa4.95□□□□□ -1.62
CIITA-208ENST00000572665 FXYD2P54710 66 aa4.95□□□□□ -1.62
CIITA-208ENST00000572665 RPL37P61927 97 aaKnown RBP4.95□□□□□ -1.62
CIITA-208ENST00000572665 MT1HP80294 61 aa4.95□□□□□ -1.62
CIITA-208ENST00000572665 COX6B2Q6YFQ2 88 aa4.95□□□□□ -1.62
CIITA-208ENST00000572665 Q6JHZ5 121 aa4.93□□□□□ -1.62
CIITA-208ENST00000572665 RAB37Q96AX2 223 aa4.93□□□□□ -1.62
CIITA-208ENST00000572665 KRTAP19-2Q3LHN2 52 aa4.92□□□□□ -1.62
CIITA-208ENST00000572665 PRO1854Q9UHT4 67 aa4.92□□□□□ -1.62
CIITA-208ENST00000572665 BVES-AS1Q5T3Y7 98 aa4.91□□□□□ -1.62
CIITA-208ENST00000572665 hADV29S1A0JD25 119 aa4.9□□□□□ -1.63
CIITA-208ENST00000572665 TSTD3H0UI37 97 aa4.9□□□□□ -1.63
CIITA-208ENST00000572665 LINC00575Q6W349 94 aa4.9□□□□□ -1.63
CIITA-208ENST00000572665 ATP11AUNQ6ZP68 121 aa4.9□□□□□ -1.63
CIITA-208ENST00000572665 PPDPFLQ8WWR9 84 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms