RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-213ENST00000571643 PPDPFLQ8WWR9 84 aa2.11□□□□□ -2.07
CDC27-213ENST00000571643 TMEM141Q96I45 108 aa2.11□□□□□ -2.07
CDC27-213ENST00000571643 C20orf78Q9BR46 151 aa2.11□□□□□ -2.07
CDC27-213ENST00000571643 MRPL35Q9NZE8 188 aaKnown RBP2.11□□□□□ -2.07
CDC27-213ENST00000571643 SPCS1Q9Y6A9 102 aa2.11□□□□□ -2.07
CDC27-213ENST00000571643 CSMD3Q7Z407 3707 aa2.11□□□□□ -2.07
CDC27-213ENST00000571643 DNAH1Q9P2D7 4330 aa2.11□□□□□ -2.07
CDC27-213ENST00000571643 DYNC2H1Q8NCM8 4307 aaKnown RBP2.1□□□□□ -2.07
CDC27-213ENST00000571643 IGLV10-54A0A075B6I4 117 aa2.1□□□□□ -2.07
CDC27-213ENST00000571643 IGLV2-18A0A075B6J9 118 aa2.1□□□□□ -2.07
CDC27-213ENST00000571643 TRBV25-1A0A075B6N4 114 aa2.1□□□□□ -2.07
CDC27-213ENST00000571643 IGHV3-64A0A075B6Q5 118 aa2.1□□□□□ -2.07
CDC27-213ENST00000571643 A0A087WSZ3 146 aa2.1□□□□□ -2.07
CDC27-213ENST00000571643 TMSB15BA0A087X1C1 80 aa2.1□□□□□ -2.07
CDC27-213ENST00000571643 TRBV6-8A0A0A6YYG3 113 aa2.1□□□□□ -2.07
CDC27-213ENST00000571643 LOC107984156A0A0G2JMH3 177 aa2.1□□□□□ -2.07
CDC27-213ENST00000571643 TRBV6-5A0A0K0K1A5 114 aa2.1□□□□□ -2.07
CDC27-213ENST00000571643 A0A1B0GU33 70 aa2.1□□□□□ -2.07
CDC27-213ENST00000571643 SMIM27A0A1W2PRY6 76 aa2.1□□□□□ -2.07
CDC27-213ENST00000571643 hADV29S1A0JD25 119 aa2.1□□□□□ -2.07
CDC27-213ENST00000571643 C11orf86A6NJI1 115 aa2.1□□□□□ -2.07
CDC27-213ENST00000571643 CCKP06307 115 aa2.1□□□□□ -2.07
CDC27-213ENST00000571643 HINT1P49773 126 aaPredicted RBP2.1□□□□□ -2.07
CDC27-213ENST00000571643 ZNF56Q15929 161 aa2.1□□□□□ -2.07
CDC27-213ENST00000571643 Q6ZRN7 208 aaPredicted RBP2.1□□□□□ -2.07
CDC27-213ENST00000571643 ARL17AQ8IVW1 177 aa2.1□□□□□ -2.07
CDC27-213ENST00000571643 LINC00269Q8N2A0 174 aa2.1□□□□□ -2.07
CDC27-213ENST00000571643 KLK12Q9UKR0 248 aa2.1□□□□□ -2.07
CDC27-213ENST00000571643 STARD9Q9P2P6 4700 aa2.1□□□□□ -2.07
CDC27-213ENST00000571643 ALMS1Q8TCU4 4167 aa2.1□□□□□ -2.07
CDC27-213ENST00000571643 VPS13DQ5THJ4 4388 aa2.09□□□□□ -2.07
CDC27-213ENST00000571643 A0A1W2PPM0 123 aa2.09□□□□□ -2.07
CDC27-213ENST00000571643 HIGD1CA8MV81 97 aa2.09□□□□□ -2.07
CDC27-213ENST00000571643 K7EMI3 77 aa2.09□□□□□ -2.07
CDC27-213ENST00000571643 M0R2N4 97 aa2.09□□□□□ -2.07
CDC27-213ENST00000571643 SPATA45Q537H7 98 aa2.09□□□□□ -2.07
CDC27-213ENST00000571643 WFDC10BQ8IUB3 73 aa2.09□□□□□ -2.07
CDC27-213ENST00000571643 FAM19A2Q8N3H0 131 aa2.09□□□□□ -2.07
CDC27-213ENST00000571643 SERP2Q8N6R1 65 aa2.09□□□□□ -2.07
CDC27-213ENST00000571643 TMEM254Q8TBM7 123 aa2.09□□□□□ -2.07
CDC27-213ENST00000571643 NDUFA12Q9UI09 145 aa2.09□□□□□ -2.07
CDC27-213ENST00000571643 V9GYV3 84 aa2.09□□□□□ -2.07
CDC27-213ENST00000571643 PLECQ15149 4684 aaKnown RBP2.09□□□□□ -2.08
CDC27-213ENST00000571643 RYR3Q15413 4870 aa2.08□□□□□ -2.08
CDC27-213ENST00000571643 LINC01549A6NIU2 74 aa2.08□□□□□ -2.08
CDC27-213ENST00000571643 I3L3M4 83 aa2.08□□□□□ -2.08
CDC27-213ENST00000571643 PSCAO43653 123 aa2.08□□□□□ -2.08
CDC27-213ENST00000571643 NUPR1O60356 82 aa2.08□□□□□ -2.08
CDC27-213ENST00000571643 RBM3P98179 157 aaKnown RBP2.08□□□□□ -2.08
CDC27-213ENST00000571643 BVES-AS1Q5T3Y7 98 aa2.08□□□□□ -2.08
CDC27-213ENST00000571643 TIMM21Q9BVV7 248 aa2.08□□□□□ -2.08
CDC27-213ENST00000571643 CYP4F30PQ9H0H9 118 aa2.08□□□□□ -2.08
CDC27-213ENST00000571643 DNAH6Q9C0G6 4158 aa2.08□□□□□ -2.08
CDC27-213ENST00000571643 SACSQ9NZJ4 4579 aa2.08□□□□□ -2.08
CDC27-213ENST00000571643 IGLV4-69A0A075B6H9 119 aa2.07□□□□□ -2.08
CDC27-213ENST00000571643 A0A087WTM6 91 aa2.07□□□□□ -2.08
CDC27-213ENST00000571643 TRBV10-3A0A0K0K1G6 114 aa2.07□□□□□ -2.08
CDC27-213ENST00000571643 LRCOL1A6NCL2 159 aa2.07□□□□□ -2.08
CDC27-213ENST00000571643 SDHAF1A6NFY7 115 aa2.07□□□□□ -2.08
CDC27-213ENST00000571643 ERC2-IT1O76042 136 aa2.07□□□□□ -2.08
CDC27-213ENST00000571643 MGPP08493 103 aa2.07□□□□□ -2.08
CDC27-213ENST00000571643 POLR2KP53803 58 aaKnown RBP2.07□□□□□ -2.08
CDC27-213ENST00000571643 PMCHL1Q16048 86 aa2.07□□□□□ -2.08
CDC27-213ENST00000571643 S100A7L2Q5SY68 101 aa2.07□□□□□ -2.08
CDC27-213ENST00000571643 C2orf82Q6UX34 121 aa2.07□□□□□ -2.08
CDC27-213ENST00000571643 C20orf166-AS1Q96NR2 134 aa2.07□□□□□ -2.08
CDC27-213ENST00000571643 HYDINQ4G0P3 5121 aa2.07□□□□□ -2.08
CDC27-213ENST00000571643 MUC21A0A140T8X8 626 aa2.06□□□□□ -2.08
CDC27-213ENST00000571643 C16orf90A8MZG2 172 aa2.06□□□□□ -2.08
CDC27-213ENST00000571643 SYS1-DBNDD2H3BUS1 97 aa2.06□□□□□ -2.08
CDC27-213ENST00000571643 IGHV3-30P01768 117 aa2.06□□□□□ -2.08
CDC27-213ENST00000571643 IGHV3-33P01772 117 aa2.06□□□□□ -2.08
CDC27-213ENST00000571643 ANGP03950 147 aaKnown RBP2.06□□□□□ -2.08
CDC27-213ENST00000571643 IGHV3-30-5P0DP03 117 aa2.06□□□□□ -2.08
CDC27-213ENST00000571643 ETDBQ3ZM63 59 aa2.06□□□□□ -2.08
CDC27-213ENST00000571643 C9orf116Q5BN46 136 aaPredicted RBP2.06□□□□□ -2.08
CDC27-213ENST00000571643 ENHOQ6UWT2 76 aa2.06□□□□□ -2.08
CDC27-213ENST00000571643 LYSTQ99698 3801 aa2.06□□□□□ -2.08
CDC27-213ENST00000571643 NXT2Q9NPJ8 142 aaKnown RBP2.06□□□□□ -2.08
CDC27-213ENST00000571643 IGKV2D-24A0A075B6R9 120 aa2.05□□□□□ -2.08
CDC27-213ENST00000571643 TRAV13-2A0A0B4J235 113 aa2.05□□□□□ -2.08
CDC27-213ENST00000571643 BCE1O60756 84 aa2.05□□□□□ -2.08
CDC27-213ENST00000571643 FCER1GP30273 86 aa2.05□□□□□ -2.08
CDC27-213ENST00000571643 C18orf32Q8TCD1 76 aa2.05□□□□□ -2.08
CDC27-213ENST00000571643 HIGD2AQ9BW72 106 aa2.05□□□□□ -2.08
CDC27-213ENST00000571643 ACYP1P07311 99 aa2.04□□□□□ -2.08
CDC27-213ENST00000571643 CNBPP62633 177 aaKnown RBP2.04□□□□□ -2.08
CDC27-213ENST00000571643 KRTAP26-1Q6PEX3 210 aa2.04□□□□□ -2.08
CDC27-213ENST00000571643 RPL39LQ96EH5 51 aaKnown RBP2.04□□□□□ -2.08
CDC27-213ENST00000571643 LINC01600Q96MT4 127 aa2.04□□□□□ -2.08
CDC27-213ENST00000571643 SMIM2Q9BVW6 85 aa2.04□□□□□ -2.08
CDC27-213ENST00000571643 CDC42SE2Q9NRR3 84 aa2.04□□□□□ -2.08
CDC27-213ENST00000571643 BIRC6Q9NR09 4857 aa2.03□□□□□ -2.08
CDC27-213ENST00000571643 IGLV4-60A0A075B6I1 120 aa2.03□□□□□ -2.08
CDC27-213ENST00000571643 LINC00959A0A1B0GUT2 108 aa2.03□□□□□ -2.08
CDC27-213ENST00000571643 LINC01546A6NGU7 62 aa2.03□□□□□ -2.08
CDC27-213ENST00000571643 D6R8Y8 96 aa2.03□□□□□ -2.08
CDC27-213ENST00000571643 HCG22E2RYF7 251 aa2.03□□□□□ -2.08
CDC27-213ENST00000571643 H3BUT2 72 aa2.03□□□□□ -2.08
CDC27-213ENST00000571643 IFI27P40305 119 aaPredicted RBP2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms