RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 LCE6AA0A183 80 aa14.76□□□□□ -0.05
LINC00543-201ENST00000567234 LINC00474Q9P2X8 69 aa14.76□□□□□ -0.05
LINC00543-201ENST00000567234 IGKV2-24A0A0C4DH68 120 aa14.75□□□□□ -0.05
LINC00543-201ENST00000567234 A0A1W2PNN7 141 aa14.73□□□□□ -0.05
LINC00543-201ENST00000567234 C3orf84H3BNL1 204 aa14.73□□□□□ -0.05
LINC00543-201ENST00000567234 REG3GQ6UW15 175 aa14.73□□□□□ -0.05
LINC00543-201ENST00000567234 Q6ZR54 194 aa14.72□□□□□ -0.05
LINC00543-201ENST00000567234 BRK1Q8WUW1 75 aa14.72□□□□□ -0.05
LINC00543-201ENST00000567234 C1orf195Q5TG92 126 aa14.71□□□□□ -0.06
LINC00543-201ENST00000567234 SCXQ7RTU7 201 aa14.71□□□□□ -0.06
LINC00543-201ENST00000567234 Q9BRP9 147 aa14.71□□□□□ -0.06
LINC00543-201ENST00000567234 LY6G6CO95867 125 aa14.69□□□□□ -0.06
LINC00543-201ENST00000567234 KMT2AQ03164 3969 aa14.69□□□□□ -0.06
LINC00543-201ENST00000567234 LINC00476Q8WZB0 136 aa14.66□□□□□ -0.06
LINC00543-201ENST00000567234 IGLV5-48A0A075B6I7 105 aa14.66□□□□□ -0.06
LINC00543-201ENST00000567234 A0A087WTM6 91 aa14.66□□□□□ -0.06
LINC00543-201ENST00000567234 V9GYY9 64 aa14.66□□□□□ -0.06
LINC00543-201ENST00000567234 Q8N377 158 aa14.65□□□□□ -0.06
LINC00543-201ENST00000567234 CHTF8P0CG12 524 aa14.64□□□□□ -0.07
LINC00543-201ENST00000567234 Q1T7F1 81 aa14.64□□□□□ -0.07
LINC00543-201ENST00000567234 hDV103S1A0JD37 113 aa14.62□□□□□ -0.07
LINC00543-201ENST00000567234 UBE2BP63146 152 aa14.62□□□□□ -0.07
LINC00543-201ENST00000567234 ALMS1Q8TCU4 4167 aa14.61□□□□□ -0.07
LINC00543-201ENST00000567234 FAM229BQ4G0N7 80 aa14.61□□□□□ -0.07
LINC00543-201ENST00000567234 PRR15Q8IV56 129 aa14.61□□□□□ -0.07
LINC00543-201ENST00000567234 DEFB105AQ8NG35 78 aa14.59□□□□□ -0.07
LINC00543-201ENST00000567234 PHF5AQ7RTV0 110 aaKnown RBP14.57□□□□□ -0.08
LINC00543-201ENST00000567234 ZCCHC13Q8WW36 166 aaKnown RBP14.57□□□□□ -0.08
LINC00543-201ENST00000567234 C1orf134Q5TEV5 83 aa14.56□□□□□ -0.08
LINC00543-201ENST00000567234 MPLKIPQ8TAP9 179 aa14.56□□□□□ -0.08
LINC00543-201ENST00000567234 CYP4F30PQ9H0H9 118 aa14.56□□□□□ -0.08
LINC00543-201ENST00000567234 HIGD2AQ9BW72 106 aa14.55□□□□□ -0.08
LINC00543-201ENST00000567234 H0Y9J4 135 aa14.54□□□□□ -0.08
LINC00543-201ENST00000567234 ST20-AS1Q8NBB2 130 aa14.54□□□□□ -0.08
LINC00543-201ENST00000567234 SPACA4Q8TDM5 124 aa14.53□□□□□ -0.08
LINC00543-201ENST00000567234 Q8N9L7 120 aa14.52□□□□□ -0.08
LINC00543-201ENST00000567234 DNAH2Q9P225 4427 aa14.52□□□□□ -0.09
LINC00543-201ENST00000567234 NDUFB1O75438 58 aa14.51□□□□□ -0.09
LINC00543-201ENST00000567234 HYDINQ4G0P3 5121 aa14.51□□□□□ -0.09
LINC00543-201ENST00000567234 TNP2Q05952 138 aa14.5□□□□□ -0.09
LINC00543-201ENST00000567234 DNAH6Q9C0G6 4158 aa14.5□□□□□ -0.09
LINC00543-201ENST00000567234 PANO1I0J062 215 aa14.5□□□□□ -0.09
LINC00543-201ENST00000567234 RTL8CO15255 209 aa14.5□□□□□ -0.09
LINC00543-201ENST00000567234 PRLHP81277 87 aa14.49□□□□□ -0.09
LINC00543-201ENST00000567234 KRTAP11-1Q8IUC1 163 aa14.49□□□□□ -0.09
LINC00543-201ENST00000567234 SPRR4Q96PI1 79 aa14.48□□□□□ -0.09
LINC00543-201ENST00000567234 SMIM29Q86T20 159 aa14.48□□□□□ -0.09
LINC00543-201ENST00000567234 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.47□□□□□ -0.09
LINC00543-201ENST00000567234 SEC61GP60059 68 aa14.46□□□□□ -0.09
LINC00543-201ENST00000567234 Q8NBF4 154 aa14.45□□□□□ -0.1
LINC00543-201ENST00000567234 C1orf64Q8NEQ6 169 aa14.43□□□□□ -0.1
LINC00543-201ENST00000567234 SACSQ9NZJ4 4579 aa14.42□□□□□ -0.1
LINC00543-201ENST00000567234 HECTD4Q9Y4D8 3996 aa14.41□□□□□ -0.1
LINC00543-201ENST00000567234 C1orf137Q5JT78 98 aa14.41□□□□□ -0.1
LINC00543-201ENST00000567234 IGLV5-52A0A0A0MRZ9 124 aa14.4□□□□□ -0.1
LINC00543-201ENST00000567234 FAM30AQ9NZY2 134 aa14.4□□□□□ -0.1
LINC00543-201ENST00000567234 A0A1W2PNM2 257 aa14.39□□□□□ -0.11
LINC00543-201ENST00000567234 UBE2AP49459 152 aa14.39□□□□□ -0.11
LINC00543-201ENST00000567234 DNAH17Q9UFH2 4485 aa14.39□□□□□ -0.11
LINC00543-201ENST00000567234 PLAC8Q9NZF1 115 aa14.37□□□□□ -0.11
LINC00543-201ENST00000567234 SPRR1BP22528 89 aa14.36□□□□□ -0.11
LINC00543-201ENST00000567234 KRTAP13-1Q8IUC0 172 aa14.36□□□□□ -0.11
LINC00543-201ENST00000567234 PMAIP1Q13794 54 aa14.36□□□□□ -0.11
LINC00543-201ENST00000567234 IGLV8-61A0A075B6I0 122 aa14.35□□□□□ -0.11
LINC00543-201ENST00000567234 H3BPC8 53 aa14.34□□□□□ -0.11
LINC00543-201ENST00000567234 FRAS1Q86XX4 4008 aa14.34□□□□□ -0.11
LINC00543-201ENST00000567234 DSCR10P59022 87 aa14.34□□□□□ -0.11
LINC00543-201ENST00000567234 HCG22E2RYF7 251 aa14.32□□□□□ -0.12
LINC00543-201ENST00000567234 SPANXA2-OT1Q8N9U9 137 aa14.31□□□□□ -0.12
LINC00543-201ENST00000567234 TRAV22A0A0B4J277 110 aa14.29□□□□□ -0.12
LINC00543-201ENST00000567234 KMT2CQ8NEZ4 4911 aaKnown RBP14.28□□□□□ -0.12
LINC00543-201ENST00000567234 MP68P56378 58 aa14.27□□□□□ -0.12
LINC00543-201ENST00000567234 IGFL1Q6UW32 110 aa14.25□□□□□ -0.13
LINC00543-201ENST00000567234 K7EQZ3 153 aa14.23□□□□□ -0.13
LINC00543-201ENST00000567234 FAT2Q9NYQ8 4349 aa14.23□□□□□ -0.13
LINC00543-201ENST00000567234 LIMD2Q9BT23 127 aa14.22□□□□□ -0.13
LINC00543-201ENST00000567234 PSORS1C2Q9UIG4 136 aa14.22□□□□□ -0.13
LINC00543-201ENST00000567234 RYR2Q92736 4967 aa14.2□□□□□ -0.14
LINC00543-201ENST00000567234 KRTAP10-2P60368 255 aa14.17□□□□□ -0.14
LINC00543-201ENST00000567234 ZNF706Q9Y5V0 76 aaPredicted RBP14.16□□□□□ -0.14
LINC00543-201ENST00000567234 DNAH11Q96DT5 4516 aa14.16□□□□□ -0.14
LINC00543-201ENST00000567234 LINC00483Q53H64 154 aa14.14□□□□□ -0.15
LINC00543-201ENST00000567234 ZNF861PO60384 105 aa14.13□□□□□ -0.15
LINC00543-201ENST00000567234 CD164Q04900 197 aa14.12□□□□□ -0.15
LINC00543-201ENST00000567234 SRRM2Q9UQ35 2752 aaKnown RBP14.11□□□□□ -0.15
LINC00543-201ENST00000567234 PSPHP1O15172 72 aa14.11□□□□□ -0.15
LINC00543-201ENST00000567234 A0A0G2JQZ4 141 aa14.11□□□□□ -0.15
LINC00543-201ENST00000567234 PKD1P98161 4303 aa14.1□□□□□ -0.15
LINC00543-201ENST00000567234 KRTAP29-1A8MX34 341 aaPredicted RBP14.08□□□□□ -0.15
LINC00543-201ENST00000567234 Q5VV11 94 aa14.08□□□□□ -0.15
LINC00543-201ENST00000567234 Q6ZSA8 131 aa14.08□□□□□ -0.15
LINC00543-201ENST00000567234 RPL37AP61513 92 aaKnown RBP14.08□□□□□ -0.16
LINC00543-201ENST00000567234 DNAH8Q96JB1 4490 aa14.07□□□□□ -0.16
LINC00543-201ENST00000567234 LINC00208Q96KT6 92 aa14.07□□□□□ -0.16
LINC00543-201ENST00000567234 DNAH5Q8TE73 4624 aa14.07□□□□□ -0.16
LINC00543-201ENST00000567234 CIRBP-AS1Q8TBR5 109 aa14.06□□□□□ -0.16
LINC00543-201ENST00000567234 A8MUN3 132 aa14.06□□□□□ -0.16
LINC00543-201ENST00000567234 A0A087WSZ3 146 aa14.04□□□□□ -0.16
LINC00543-201ENST00000567234 IGLV7-43P04211 117 aa14.04□□□□□ -0.16
LINC00543-201ENST00000567234 Q8N9P0 234 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms